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The map label for this gene is ywbD [H]

Identifier: 226223210

GI number: 226223210

Start: 621328

End: 622512

Strand: Reverse

Name: ywbD [H]

Synonym: Lm4b_00607

Alternate gene names: 226223210

Gene position: 622512-621328 (Counterclockwise)

Preceding gene: 226223211

Following gene: 226223207

Centisome position: 21.37

GC content: 37.13

Gene sequence:

>1185_bases
ATGAAGAATCTAGTAAAAGTAAAAGTTTTTCCTAAGTTCACAAAAGGCTATAAGGAAGGTTATCCCCTTATTCTTAAAGA
GCGTATGGAAAAATGGCCAAAAGAATTACAAGAAGGCGACGTATTAGAATTAACAGATACGAATGGTCAATTTATTGCAA
GAGGCTACCACGGAGAACAAAACAAAGGCAGCGGCTGGCTTTTCACTTGGGACAAGAAACAGCAACTCGATGAAGACTTT
TTAACGAACCTAATTACGACAGCAATCGAAAAACGTCAATTTCTATTTGCAGATGACTCTACTACTGCTTTTCGGATTTT
TAATGGCGAAGGAGATGGACTTGGTGGTTTCACTGTTGATTTTTATGATGGTTATCTCGTAATTCAATGGTACAGTCTAG
GCATCTACGCTTTCCAAAAAATGATTATTGATATTTTCTTATCTTTTCCAGAAATAAAAGGTATTTATGAAAAAAGACGT
TTTCAAGAAGATACAAAAGACGATTTCGTCGCCGGTCAAAAAGCAACTTTCCCACTTATTATTAAAGAAAATGGCATTAA
TTATGCAACTTATTTAGATGATGGTTGGATGACAGGTATCTTTCTAGATCAACGGGATGTGCGGAGAAGAATTAGTGAGG
ATTATTCTGTTTCAAAAAATGTCTTAAATACATTTTCGTATACAGGGGCATTCTCGGTAGCAGCTTTATTTGGTGGCGCG
AGTAAAACGACAAGCGTAGATGTGGCTGGTCGTTCGCTCAGCAAGACAAAAGAACAATTAGAAGTAAATGGTCTTGATCC
AAACGAGCAAGCGATTATCGTAGAAGATGTTTTCCATTATTTCAAATATGCAGCGCGCAAACAATTAACTTTTGATTTAG
TTGTTGTTGATCCCCCAAGCTTTGCACGCACAAAAAAAGTAACTTTCCGAGCGGCGAAAGATTACCCTGCTATGCTTCGT
GAAATCATTGACATCACTGCACCAAACGGCACCATCGTTGCTTCAACAAATTATGCAGGATTCGGTATGAAAGCATTTAA
AAAATTAATTGCGGAGGCCTTCCAAACAAGCGACCGTACTTATAAAATTGTTGAAACTCATTCCTTACCCGCAGATTTCA
CGGTAAATAAAAACTTTCCTGAGGGGAATTATTTAAAAGTGCTCTTTCTTACTTTAGATATCTAA

Upstream 100 bases:

>100_bases
CGGTCGCGTATAATTAATAACTTAAAGTAACCTGTGGAGCAAGCAGTTCGCTTCACAGGTTTTTTGTTGGAAATTTTATC
TTAATGAAAGACGGTGCATG

Downstream 100 bases:

>100_bases
AAAACAGCGACCGAGTGCGGTCGCTGTTTTTTATTTATTTTTCACTGGTTGGTTTGGCAAAAAGCTTTCAAACCATCTAT
ATAAGTCATCTTCTTCCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKNLVKVKVFPKFTKGYKEGYPLILKERMEKWPKELQEGDVLELTDTNGQFIARGYHGEQNKGSGWLFTWDKKQQLDEDF
LTNLITTAIEKRQFLFADDSTTAFRIFNGEGDGLGGFTVDFYDGYLVIQWYSLGIYAFQKMIIDIFLSFPEIKGIYEKRR
FQEDTKDDFVAGQKATFPLIIKENGINYATYLDDGWMTGIFLDQRDVRRRISEDYSVSKNVLNTFSYTGAFSVAALFGGA
SKTTSVDVAGRSLSKTKEQLEVNGLDPNEQAIIVEDVFHYFKYAARKQLTFDLVVVDPPSFARTKKVTFRAAKDYPAMLR
EIIDITAPNGTIVASTNYAGFGMKAFKKLIAEAFQTSDRTYKIVETHSLPADFTVNKNFPEGNYLKVLFLTLDI

Sequences:

>Translated_394_residues
MKNLVKVKVFPKFTKGYKEGYPLILKERMEKWPKELQEGDVLELTDTNGQFIARGYHGEQNKGSGWLFTWDKKQQLDEDF
LTNLITTAIEKRQFLFADDSTTAFRIFNGEGDGLGGFTVDFYDGYLVIQWYSLGIYAFQKMIIDIFLSFPEIKGIYEKRR
FQEDTKDDFVAGQKATFPLIIKENGINYATYLDDGWMTGIFLDQRDVRRRISEDYSVSKNVLNTFSYTGAFSVAALFGGA
SKTTSVDVAGRSLSKTKEQLEVNGLDPNEQAIIVEDVFHYFKYAARKQLTFDLVVVDPPSFARTKKVTFRAAKDYPAMLR
EIIDITAPNGTIVASTNYAGFGMKAFKKLIAEAFQTSDRTYKIVETHSLPADFTVNKNFPEGNYLKVLFLTLDI
>Mature_394_residues
MKNLVKVKVFPKFTKGYKEGYPLILKERMEKWPKELQEGDVLELTDTNGQFIARGYHGEQNKGSGWLFTWDKKQQLDEDF
LTNLITTAIEKRQFLFADDSTTAFRIFNGEGDGLGGFTVDFYDGYLVIQWYSLGIYAFQKMIIDIFLSFPEIKGIYEKRR
FQEDTKDDFVAGQKATFPLIIKENGINYATYLDDGWMTGIFLDQRDVRRRISEDYSVSKNVLNTFSYTGAFSVAALFGGA
SKTTSVDVAGRSLSKTKEQLEVNGLDPNEQAIIVEDVFHYFKYAARKQLTFDLVVVDPPSFARTKKVTFRAAKDYPAMLR
EIIDITAPNGTIVASTNYAGFGMKAFKKLIAEAFQTSDRTYKIVETHSLPADFTVNKNFPEGNYLKVLFLTLDI

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=373, Percent_Identity=28.686327077748, Blast_Score=169, Evalue=4e-43,
Organism=Escherichia coli, GI1787181, Length=325, Percent_Identity=27.3846153846154, Blast_Score=106, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 44902; Mature: 44902

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLVKVKVFPKFTKGYKEGYPLILKERMEKWPKELQEGDVLELTDTNGQFIARGYHGEQ
CCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCC
NKGSGWLFTWDKKQQLDEDFLTNLITTAIEKRQFLFADDSTTAFRIFNGEGDGLGGFTVD
CCCCEEEEEECHHHHCCHHHHHHHHHHHHHHCEEEEECCCCEEEEEECCCCCCCCCEEEE
FYDGYLVIQWYSLGIYAFQKMIIDIFLSFPEIKGIYEKRRFQEDTKDDFVAGQKATFPLI
EECCEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEE
IKENGINYATYLDDGWMTGIFLDQRDVRRRISEDYSVSKNVLNTFSYTGAFSVAALFGGA
EEECCCEEEEEECCCCEEEEEECHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCC
SKTTSVDVAGRSLSKTKEQLEVNGLDPNEQAIIVEDVFHYFKYAARKQLTFDLVVVDPPS
CCCCEEEECCCHHHHHHHHEEECCCCCCCCEEEHHHHHHHHHHHHHCCEEEEEEEECCCC
FARTKKVTFRAAKDYPAMLREIIDITAPNGTIVASTNYAGFGMKAFKKLIAEAFQTSDRT
CCCCEEEEEEECCCCHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCE
YKIVETHSLPADFTVNKNFPEGNYLKVLFLTLDI
EEEEEECCCCCCEEECCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MKNLVKVKVFPKFTKGYKEGYPLILKERMEKWPKELQEGDVLELTDTNGQFIARGYHGEQ
CCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCC
NKGSGWLFTWDKKQQLDEDFLTNLITTAIEKRQFLFADDSTTAFRIFNGEGDGLGGFTVD
CCCCEEEEEECHHHHCCHHHHHHHHHHHHHHCEEEEECCCCEEEEEECCCCCCCCCEEEE
FYDGYLVIQWYSLGIYAFQKMIIDIFLSFPEIKGIYEKRRFQEDTKDDFVAGQKATFPLI
EECCEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEE
IKENGINYATYLDDGWMTGIFLDQRDVRRRISEDYSVSKNVLNTFSYTGAFSVAALFGGA
EEECCCEEEEEECCCCEEEEEECHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCC
SKTTSVDVAGRSLSKTKEQLEVNGLDPNEQAIIVEDVFHYFKYAARKQLTFDLVVVDPPS
CCCCEEEECCCHHHHHHHHEEECCCCCCCCEEEHHHHHHHHHHHHHCCEEEEEEEECCCC
FARTKKVTFRAAKDYPAMLREIIDITAPNGTIVASTNYAGFGMKAFKKLIAEAFQTSDRT
CCCCEEEEEEECCCCHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCE
YKIVETHSLPADFTVNKNFPEGNYLKVLFLTLDI
EEEEEECCCCCCEEECCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]