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The map label for this gene is 226222991

Identifier: 226222991

GI number: 226222991

Start: 392480

End: 393427

Strand: Direct

Name: 226222991

Synonym: Lm4b_00383

Alternate gene names: NA

Gene position: 392480-393427 (Clockwise)

Preceding gene: 226222987

Following gene: 226222992

Centisome position: 13.47

GC content: 31.54

Gene sequence:

>948_bases
ATGAATAAATCAGAACGACTAAATGATATGATGTTGTTTTTAAATGATAAAAATACGTTTCAATTAAGCGATATAATGAC
GAAATATGATATATCTCGAAGTACTGCCATTCGAGACATAAAGTCTTTGGAAGAAATAGGGATGCCGATATATTCGGAAC
GGGGACGAAATGGTCATTATCAGGTGCTTCGTAATCGACTACTCTCACCCATTGTCTTTAATATCGATGAGGTATTTGCG
CTTTATTTTTCGATGCTTACGTTAAAGACTTATGAAACAACACCTTTTCATTTAAGTGTGGAAAAATTAAAAACGAAATT
TGAACGTTGTCTTTCAGCTGAAAAAATCGAAATGCTTCGAAAAACAGAAGAAGTATTTAGTCTCGGCTATATAAAGCATA
ATAATCAATGTGAATTTCTAGATATTATTTTGCAATTTACGATGGAAGAGAAAGTGTGTCAGATTAATTATGATAAAAAT
GGGACTGAAAAAACGTATATTGTTCAATTTTATAATATATCTTCGGCGTACGGGCAATGGTATGTGACGAGTTATAACTT
CGAAACGAAACGGATGCAGGTATTTCGTTGTGATAGAATTCTTGGGTTAGAAGAAAATGATGCTTTTGAAGCCAAAAAAT
TAGTGGATTTTAAAAGAGCCGCCGAAAATTTTTATAAGAAAGAAGATGCAACTAATTTTGAAGTGGAAATTGCTTCAAAT
GGTGTTGATTTATTTTTTAAAGAAAATTATCCATCAATGAGGCTTCGACAAGAGCAAGGGAAAAATTTTATTCGTGGCTA
TTATAATAAAGGAGAAGAACGATTTATTATTAATTATTTACTAGGTTATGGCGATAAAATAATAGCCATTCAGCCAGATT
CATTACGAGAAATGCTACTAAATGAGCTTGGTTCCTTGCAAAATCACTTTTTAAAATTATCGTTATAA

Upstream 100 bases:

>100_bases
CATCATCCTAGCTCCTTTGGTTTGGTTTCTAGTTATAGTATAATGCTTAAAGGTATCAATTAGTGACACCTTTTAATCTG
GAAAAAGAAAAGAGATGGCG

Downstream 100 bases:

>100_bases
AAAACTCCGATTCCATTATCGGAGTTTTTTTATTTGGATGAAAACATGAAAAAATTTATTGACTTTTTTGAACATGGAGA
ATATGATAATGATAATCATT

Product: transcription regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Type; DeoR Family Transcriptional Regulator; Transcriptional Regulator DeoR Family; Transcription Regulator; Deor Family Transcriptional Regulator; HTH Domain Family; Transcriptional Regulator DeoR

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MNKSERLNDMMLFLNDKNTFQLSDIMTKYDISRSTAIRDIKSLEEIGMPIYSERGRNGHYQVLRNRLLSPIVFNIDEVFA
LYFSMLTLKTYETTPFHLSVEKLKTKFERCLSAEKIEMLRKTEEVFSLGYIKHNNQCEFLDIILQFTMEEKVCQINYDKN
GTEKTYIVQFYNISSAYGQWYVTSYNFETKRMQVFRCDRILGLEENDAFEAKKLVDFKRAAENFYKKEDATNFEVEIASN
GVDLFFKENYPSMRLRQEQGKNFIRGYYNKGEERFIINYLLGYGDKIIAIQPDSLREMLLNELGSLQNHFLKLSL

Sequences:

>Translated_315_residues
MNKSERLNDMMLFLNDKNTFQLSDIMTKYDISRSTAIRDIKSLEEIGMPIYSERGRNGHYQVLRNRLLSPIVFNIDEVFA
LYFSMLTLKTYETTPFHLSVEKLKTKFERCLSAEKIEMLRKTEEVFSLGYIKHNNQCEFLDIILQFTMEEKVCQINYDKN
GTEKTYIVQFYNISSAYGQWYVTSYNFETKRMQVFRCDRILGLEENDAFEAKKLVDFKRAAENFYKKEDATNFEVEIASN
GVDLFFKENYPSMRLRQEQGKNFIRGYYNKGEERFIINYLLGYGDKIIAIQPDSLREMLLNELGSLQNHFLKLSL
>Mature_315_residues
MNKSERLNDMMLFLNDKNTFQLSDIMTKYDISRSTAIRDIKSLEEIGMPIYSERGRNGHYQVLRNRLLSPIVFNIDEVFA
LYFSMLTLKTYETTPFHLSVEKLKTKFERCLSAEKIEMLRKTEEVFSLGYIKHNNQCEFLDIILQFTMEEKVCQINYDKN
GTEKTYIVQFYNISSAYGQWYVTSYNFETKRMQVFRCDRILGLEENDAFEAKKLVDFKRAAENFYKKEDATNFEVEIASN
GVDLFFKENYPSMRLRQEQGKNFIRGYYNKGEERFIINYLLGYGDKIIAIQPDSLREMLLNELGSLQNHFLKLSL

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37325; Mature: 37325

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSERLNDMMLFLNDKNTFQLSDIMTKYDISRSTAIRDIKSLEEIGMPIYSERGRNGHY
CCCHHHCCEEEEEECCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH
QVLRNRLLSPIVFNIDEVFALYFSMLTLKTYETTPFHLSVEKLKTKFERCLSAEKIEMLR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEHHHHHHHHHHHHCHHHHHHHH
KTEEVFSLGYIKHNNQCEFLDIILQFTMEEKVCQINYDKNGTEKTYIVQFYNISSAYGQW
HHHHHHHHHCEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEEECCCCCCCE
YVTSYNFETKRMQVFRCDRILGLEENDAFEAKKLVDFKRAAENFYKKEDATNFEVEIASN
EEEEECCCHHHHHHEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
GVDLFFKENYPSMRLRQEQGKNFIRGYYNKGEERFIINYLLGYGDKIIAIQPDSLREMLL
CEEEEEECCCCCHHHHHHHCCHHHHHHHCCCCCEEEEEEHHCCCCEEEEECCHHHHHHHH
NELGSLQNHFLKLSL
HHHHHHHHHEEEECC
>Mature Secondary Structure
MNKSERLNDMMLFLNDKNTFQLSDIMTKYDISRSTAIRDIKSLEEIGMPIYSERGRNGHY
CCCHHHCCEEEEEECCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH
QVLRNRLLSPIVFNIDEVFALYFSMLTLKTYETTPFHLSVEKLKTKFERCLSAEKIEMLR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEHHHHHHHHHHHHCHHHHHHHH
KTEEVFSLGYIKHNNQCEFLDIILQFTMEEKVCQINYDKNGTEKTYIVQFYNISSAYGQW
HHHHHHHHHCEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEEECCCCCCCE
YVTSYNFETKRMQVFRCDRILGLEENDAFEAKKLVDFKRAAENFYKKEDATNFEVEIASN
EEEEECCCHHHHHHEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
GVDLFFKENYPSMRLRQEQGKNFIRGYYNKGEERFIINYLLGYGDKIIAIQPDSLREMLL
CEEEEEECCCCCHHHHHHHCCHHHHHHHCCCCCEEEEEEHHCCCCEEEEECCHHHHHHHH
NELGSLQNHFLKLSL
HHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA