| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is 226222955
Identifier: 226222955
GI number: 226222955
Start: 354049
End: 354729
Strand: Direct
Name: 226222955
Synonym: Lm4b_00347
Alternate gene names: NA
Gene position: 354049-354729 (Clockwise)
Preceding gene: 226222954
Following gene: 226222957
Centisome position: 12.16
GC content: 31.57
Gene sequence:
>681_bases TTGTTAGAGAAAAAGTATCAAATCCATTTACAAAATCATTACGATGCAACGAGTAGACAAGTGCAAAAGAAAGAAATAAA AGTCTTAAAAAAAAGCAAAAATTTATTAAATGGGGAAGTTTTTCCATATCAAATTTGTTTAGAAAGCACGATGGAATATT CAAGATTTATGTTGTGGTTTGAAAAAGAAGTCCAAAAAATCGTGAAAGAACTTTGGAATCAACATTTTATTATCAAACTA ACATTATCCCAATTACATTTCCGCGAAACCATTCTATTTTTAGAGCATTTAAAAGATTTTAGTAAACGGATAACGATTGA ATTTATCGGTGAAGACACACCAGAAATTAAAAAACATTTTTCTGTCCAAGAGCAAGAAGCGTTTTTTATAGGGAAACTAA GAATGCTAAAAAAATGGAAATTCATTATTTCTAAACATATCGAAGGCTGCTCAGTGGAACAAACCCTTGCTTTTACCCCG TGTCTACATGAAATAAAATACACGATGAGTCAGCAAGCACGAATGGAAGAAAATATTATCGATTTGCACATGTTCATCGA TTTTTGGGAATATTGGGCAACACATAAAAAATTGAAATTCGTAGTCGAGGTGAAGGAGAAAGATTTTATTACGAAGTCTT TGATGCATAAAAAGGTCCACGTACAATTTGAGAATGCGTAG
Upstream 100 bases:
>100_bases GGTGGTGTTTTAACTAATATATCCGACATTAGAAATACCCATTTTGGAAAAGATGTATGATATTTATTGTAAAGAATTTC ACAAAGGAAGAGGCGATTCT
Downstream 100 bases:
>100_bases CGGAAGAATTATAGCCGAGCTCTGTTTATTCTATCACTCAAGAAGCCTGAGGGAGCTTTTTGACTGTATTTTTTTGCCAA TAAGTAATCTGAAAAGTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MLEKKYQIHLQNHYDATSRQVQKKEIKVLKKSKNLLNGEVFPYQICLESTMEYSRFMLWFEKEVQKIVKELWNQHFIIKL TLSQLHFRETILFLEHLKDFSKRITIEFIGEDTPEIKKHFSVQEQEAFFIGKLRMLKKWKFIISKHIEGCSVEQTLAFTP CLHEIKYTMSQQARMEENIIDLHMFIDFWEYWATHKKLKFVVEVKEKDFITKSLMHKKVHVQFENA
Sequences:
>Translated_226_residues MLEKKYQIHLQNHYDATSRQVQKKEIKVLKKSKNLLNGEVFPYQICLESTMEYSRFMLWFEKEVQKIVKELWNQHFIIKL TLSQLHFRETILFLEHLKDFSKRITIEFIGEDTPEIKKHFSVQEQEAFFIGKLRMLKKWKFIISKHIEGCSVEQTLAFTP CLHEIKYTMSQQARMEENIIDLHMFIDFWEYWATHKKLKFVVEVKEKDFITKSLMHKKVHVQFENA >Mature_226_residues MLEKKYQIHLQNHYDATSRQVQKKEIKVLKKSKNLLNGEVFPYQICLESTMEYSRFMLWFEKEVQKIVKELWNQHFIIKL TLSQLHFRETILFLEHLKDFSKRITIEFIGEDTPEIKKHFSVQEQEAFFIGKLRMLKKWKFIISKHIEGCSVEQTLAFTP CLHEIKYTMSQQARMEENIIDLHMFIDFWEYWATHKKLKFVVEVKEKDFITKSLMHKKVHVQFENA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27478; Mature: 27478
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKKYQIHLQNHYDATSRQVQKKEIKVLKKSKNLLNGEVFPYQICLESTMEYSRFMLWF CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH EKEVQKIVKELWNQHFIIKLTLSQLHFRETILFLEHLKDFSKRITIEFIGEDTPEIKKHF HHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHC SVQEQEAFFIGKLRMLKKWKFIISKHIEGCSVEQTLAFTPCLHEIKYTMSQQARMEENII CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLHMFIDFWEYWATHKKLKFVVEVKEKDFITKSLMHKKVHVQFENA HHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHEEEEECCC >Mature Secondary Structure MLEKKYQIHLQNHYDATSRQVQKKEIKVLKKSKNLLNGEVFPYQICLESTMEYSRFMLWF CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH EKEVQKIVKELWNQHFIIKLTLSQLHFRETILFLEHLKDFSKRITIEFIGEDTPEIKKHF HHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHC SVQEQEAFFIGKLRMLKKWKFIISKHIEGCSVEQTLAFTPCLHEIKYTMSQQARMEENII CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLHMFIDFWEYWATHKKLKFVVEVKEKDFITKSLMHKKVHVQFENA HHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA