| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is thiE
Identifier: 226222945
GI number: 226222945
Start: 340805
End: 341449
Strand: Direct
Name: thiE
Synonym: Lm4b_00337
Alternate gene names: 226222945
Gene position: 340805-341449 (Clockwise)
Preceding gene: 226222944
Following gene: 226222948
Centisome position: 11.7
GC content: 46.36
Gene sequence:
>645_bases ATGAGAGCTGAACTAGCTGTATATTTTATCGCTGGAACGCAAGATATTGTTCGTGGAACGTTGCCAGGTGTGTTAGAAGA AGCACTGAAAGCCGGAATTACTTGTTTCCAATATCGCGAAAAAGGAGCAGGCTCACTCCAAACTGCTTCCGAAAGAAAAG AAATGGCGCTAGAATGCCAACAATTATGCGCAAAATATCAAGTGCCATTCATTATTAACGATGATGTCGCCCTAGCCCTC GAAATCGGCGCGGACGGCATCCATGTCGGGCAAAACGACGAGGAAATTCGCCAAGTTATCGCGAGTTGCGCTGGAAAAAT GAAAATCGGACTTTCGGTTCATTCGGTTAGTGAAGCGGAGGAAGCAGAACGACTTGGTGCGGTGGATTATATTGGTGTAG GGCCCATTTTTCCAACGATTTCAAAAGCGGATGCAGAGCCAGTGAGTGGAACGGCAATTTTGGAAGAAATTCGCCGGGCT GGAATTAAGCTACCAATTGTCGGGATTGGCGGAATTAATGAAACAAATTCAGCTGAGGTTCTCACAGCAGGTGCGGACGG GGTATCGGTTATTTCAGCGATAACTCGGTCGGATGATTGCTACTCCGTTATCAAGCAATTAAAAAACCCAGGTTACCCCT CTTAA
Upstream 100 bases:
>100_bases TTGCGAAAGAATTTATCACAAGTGCGATTAAATATCCGCTTGGAATTGGTCACGGTCATGGTCCAACCAACCATTTTGCC TACCGATTGGAGGATGGGAA
Downstream 100 bases:
>100_bases AAAGGGCAAACCTGGGTTTCTCATTTTTATAAATCTTCACCATTGGTAGCAATAACGTTCTTGTACCAATCAAAACTTTT CTTCTTATAACGGTTTAGCG
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MRAELAVYFIAGTQDIVRGTLPGVLEEALKAGITCFQYREKGAGSLQTASERKEMALECQQLCAKYQVPFIINDDVALAL EIGADGIHVGQNDEEIRQVIASCAGKMKIGLSVHSVSEAEEAERLGAVDYIGVGPIFPTISKADAEPVSGTAILEEIRRA GIKLPIVGIGGINETNSAEVLTAGADGVSVISAITRSDDCYSVIKQLKNPGYPS
Sequences:
>Translated_214_residues MRAELAVYFIAGTQDIVRGTLPGVLEEALKAGITCFQYREKGAGSLQTASERKEMALECQQLCAKYQVPFIINDDVALAL EIGADGIHVGQNDEEIRQVIASCAGKMKIGLSVHSVSEAEEAERLGAVDYIGVGPIFPTISKADAEPVSGTAILEEIRRA GIKLPIVGIGGINETNSAEVLTAGADGVSVISAITRSDDCYSVIKQLKNPGYPS >Mature_214_residues MRAELAVYFIAGTQDIVRGTLPGVLEEALKAGITCFQYREKGAGSLQTASERKEMALECQQLCAKYQVPFIINDDVALAL EIGADGIHVGQNDEEIRQVIASCAGKMKIGLSVHSVSEAEEAERLGAVDYIGVGPIFPTISKADAEPVSGTAILEEIRRA GIKLPIVGIGGINETNSAEVLTAGADGVSVISAITRSDDCYSVIKQLKNPGYPS
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=192, Percent_Identity=30.7291666666667, Blast_Score=72, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6325042, Length=224, Percent_Identity=35.2678571428571, Blast_Score=107, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 22595; Mature: 22595
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAELAVYFIAGTQDIVRGTLPGVLEEALKAGITCFQYREKGAGSLQTASERKEMALECQ CCCEEEEEEEECCHHHHHHCCHHHHHHHHHHCCHHEEHHHCCCCCCHHHHHHHHHHHHHH QLCAKYQVPFIINDDVALALEIGADGIHVGQNDEEIRQVIASCAGKMKIGLSVHSVSEAE HHHHHCCCCEEECCCEEEEEEECCCCEECCCCHHHHHHHHHHHCCCEEECEEEHHHHHHH EAERLGAVDYIGVGPIFPTISKADAEPVSGTAILEEIRRAGIKLPIVGIGGINETNSAEV HHHHCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCEE LTAGADGVSVISAITRSDDCYSVIKQLKNPGYPS EEECCCHHHHHHHHHCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MRAELAVYFIAGTQDIVRGTLPGVLEEALKAGITCFQYREKGAGSLQTASERKEMALECQ CCCEEEEEEEECCHHHHHHCCHHHHHHHHHHCCHHEEHHHCCCCCCHHHHHHHHHHHHHH QLCAKYQVPFIINDDVALALEIGADGIHVGQNDEEIRQVIASCAGKMKIGLSVHSVSEAE HHHHHCCCCEEECCCEEEEEEECCCCEECCCCHHHHHHHHHHHCCCEEECEEEHHHHHHH EAERLGAVDYIGVGPIFPTISKADAEPVSGTAILEEIRRAGIKLPIVGIGGINETNSAEV HHHHCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCEE LTAGADGVSVISAITRSDDCYSVIKQLKNPGYPS EEECCCHHHHHHHHHCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]