| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226222939
Identifier: 226222939
GI number: 226222939
Start: 335703
End: 336257
Strand: Direct
Name: 226222939
Synonym: Lm4b_00331
Alternate gene names: NA
Gene position: 335703-336257 (Clockwise)
Preceding gene: 226222938
Following gene: 226222940
Centisome position: 11.53
GC content: 30.99
Gene sequence:
>555_bases ATGAGCAAAAAGTTAGTAAGTATTATTTTCTTAGGGATTTGTCTTTTGTTAGTTGGTTGTGGTAAAGAGGTTGTTGATAG TAAGTATACCGGAAAATGGAAGTTGGAATCGTCGGGGATTGGTATGAGCGATGGATCAAATTACAAGGAAACGGATGCAG CGGGTAAAGTTAGTCTTGACTTGGACATTGATGCAGAGGGAAATGTAAAAGAATTGTATATTGATGATGCAGTTGCTATA ACTAATTCTTATAAATTAAAGAAAAAAGGTGACGATGAATATCAATATGATGGTACATTGATTAGCAAAAAAGTATACAG TTATGAAACTGAAAGTGATAAAGAGAATGTAGAAACAATGCTAAAATTTCTTAAATCCAAGGATAATGTCAAAATAACCA AAAATGAACAAAAAGGGGATGAATATCACATAGATGTCAAAGCAGATGAAAAAGATTTCGTATTCTCTTTAGAAATGCAA AGTGGAAAATTAATTTTCAAAAAAGTCGATACTAAAGAGAAAGTTTTGATTAAGGAAACCTACAAGAAAAATTAA
Upstream 100 bases:
>100_bases GGCATGATGAGTATTTTGAAGAGAGAACGCAAGCAATGGAGTACATCGAGGTGGAACGGGATTAACCGTTAATTATATAC AAAAAAAGGAGAGCAACAAG
Downstream 100 bases:
>100_bases ATTATTAGAAGCGAGAAGCGGAAGTCCGTTGTAACCACCTATTTTTTAAAATTTATTTGTGAAGACTATTCTTTCGAGGG TTCTCGGGAGGATAGTTTTT
Product: secreted, lysin rich protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSKKLVSIIFLGICLLLVGCGKEVVDSKYTGKWKLESSGIGMSDGSNYKETDAAGKVSLDLDIDAEGNVKELYIDDAVAI TNSYKLKKKGDDEYQYDGTLISKKVYSYETESDKENVETMLKFLKSKDNVKITKNEQKGDEYHIDVKADEKDFVFSLEMQ SGKLIFKKVDTKEKVLIKETYKKN
Sequences:
>Translated_184_residues MSKKLVSIIFLGICLLLVGCGKEVVDSKYTGKWKLESSGIGMSDGSNYKETDAAGKVSLDLDIDAEGNVKELYIDDAVAI TNSYKLKKKGDDEYQYDGTLISKKVYSYETESDKENVETMLKFLKSKDNVKITKNEQKGDEYHIDVKADEKDFVFSLEMQ SGKLIFKKVDTKEKVLIKETYKKN >Mature_183_residues SKKLVSIIFLGICLLLVGCGKEVVDSKYTGKWKLESSGIGMSDGSNYKETDAAGKVSLDLDIDAEGNVKELYIDDAVAIT NSYKLKKKGDDEYQYDGTLISKKVYSYETESDKENVETMLKFLKSKDNVKITKNEQKGDEYHIDVKADEKDFVFSLEMQS GKLIFKKVDTKEKVLIKETYKKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20803; Mature: 20672
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKLVSIIFLGICLLLVGCGKEVVDSKYTGKWKLESSGIGMSDGSNYKETDAAGKVSLD CCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEE LDIDAEGNVKELYIDDAVAITNSYKLKKKGDDEYQYDGTLISKKVYSYETESDKENVETM EEECCCCCEEEEEECCEEEEECCEEEECCCCCCEEECCEEEEEEEEECCCCCCHHHHHHH LKFLKSKDNVKITKNEQKGDEYHIDVKADEKDFVFSLEMQSGKLIFKKVDTKEKVLIKET HHHHHCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEEECCCEEEEEECCCCHHEEEEHH YKKN CCCC >Mature Secondary Structure SKKLVSIIFLGICLLLVGCGKEVVDSKYTGKWKLESSGIGMSDGSNYKETDAAGKVSLD CHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEE LDIDAEGNVKELYIDDAVAITNSYKLKKKGDDEYQYDGTLISKKVYSYETESDKENVETM EEECCCCCEEEEEECCEEEEECCEEEECCCCCCEEECCEEEEEEEEECCCCCCHHHHHHH LKFLKSKDNVKITKNEQKGDEYHIDVKADEKDFVFSLEMQSGKLIFKKVDTKEKVLIKET HHHHHCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEEECCCEEEEEECCCCHHEEEEHH YKKN CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA