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The map label for this gene is cycB [H]

Identifier: 226222883

GI number: 226222883

Start: 267529

End: 268755

Strand: Direct

Name: cycB [H]

Synonym: Lm4b_00275

Alternate gene names: 226222883

Gene position: 267529-268755 (Clockwise)

Preceding gene: 226222882

Following gene: 226222884

Centisome position: 9.18

GC content: 38.06

Gene sequence:

>1227_bases
ATGAAAAAGTTACTTTTGTCCATCAGTATTATTGTCGGTTTAAGTTTGTTGGCTAGTTGTGGTTTAGAAAAGGAGTACAA
GCCAGATATAAAAGTAAACGAGAAAAATGTTTCTTTAAAAGTTTGGGTGGATTTAAATCAGGGAGATTTTTATAGGAAAG
TGGTAGAAGATTTTAAAAAAGAACATCCTGATAAAGATTATGATATTACGGTTATTGAATCTGAATCTGGACGAGCACAA
GAATATGTTCAGAAAGATCCAGAAGCTGCGGCGGATGTATTTATAACTCCGAATGACCGTCTAGGACAACTGGTAGAGTC
TGGTGCGGTTTACCAATTGACAAAGTATACAGATGATATTAAGAAAAATAATACACCAACCTCCATTCAAGCTGCTACAT
ATCAAGATAAAATGTATGGTTTCCCTGTGACGGCGGAAGCGATGTTTATGTATTATGATAAGCGCGTTTTTTCAGAGGAT
GATATTAAAACTTTTTCTGGAATAACGTCTAAAGGGAAGCTCGGAATAAATCTTGCGGAAGCTGGCGCGGATTATCGTGA
AACACCTTGGTTTATTGCAAATGGTACATATCTTTATGGTGAGAACGGCGAAGATCCTTATGGGACAACCTTTAACACTC
CAGAAGGCGTCCAAGTATTGAACTGGATTGGTGAGCTGAAAAATAATCCTAATATTGTCGCTGTAAATGCAGATGAGATT
AGTGCCCTTAGATCCGGTAAAATAAATGCTGTTTTTAGTGGGGTTTGGAATAAAGATGCGATACGAGAGGTTTTGGGTGA
AAATATGGGAGTGGCAGTATATCCAAAGGCCGATTTTGGAAGTGGTCAGGTAGATATGATGGCTTTCCAAGGAAGCGGGA
TATACTGTGTGAACGCATTTACTAAATCGCCATTAGATGCGATGGAACTAGCTGATTATATTACTAATGCGGATGTGCAG
GAAAAAGCTTTTAAAGAGTTAGGGAAAATTCCGAGCAATTTAGAGGCACGAACTAGTTCTACAGTAGAAAAGGACGATGT
GGCGAAAGCAGTTATTGATATGACATCCGGAAAGCACTCCGTTTTAATGCCGAAAATACCTGAAATGAACGTTTTTTGGC
AACATATGAACCCGCTATTAGTAGATACTTATAAAGGCAAGATTAAGAAAGAAGATTATCCAGAGGCGCTCGATAAATTA
GTCAAAGATATTACACCAGCGAAATAG

Upstream 100 bases:

>100_bases
TTGTAAGATAATTGATATTATTTTTACGATATATGAAACCGCTTAAGCTAAAATGACAACCGGTTGTCATTTTAAGTGAA
GATAAGGAGAATGTTAAAGT

Downstream 100 bases:

>100_bases
GAAAGTAGGTTAAGTATATGATGGTTAAGAAGAATTATTTTAATATTTTTAAGAATGGTTCTGTTTCTACGAGATTATCT
TATGTAATTATGGGGGCTGG

Product: maltose/maltodextrin ABC transporter (binding protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MKKLLLSISIIVGLSLLASCGLEKEYKPDIKVNEKNVSLKVWVDLNQGDFYRKVVEDFKKEHPDKDYDITVIESESGRAQ
EYVQKDPEAAADVFITPNDRLGQLVESGAVYQLTKYTDDIKKNNTPTSIQAATYQDKMYGFPVTAEAMFMYYDKRVFSED
DIKTFSGITSKGKLGINLAEAGADYRETPWFIANGTYLYGENGEDPYGTTFNTPEGVQVLNWIGELKNNPNIVAVNADEI
SALRSGKINAVFSGVWNKDAIREVLGENMGVAVYPKADFGSGQVDMMAFQGSGIYCVNAFTKSPLDAMELADYITNADVQ
EKAFKELGKIPSNLEARTSSTVEKDDVAKAVIDMTSGKHSVLMPKIPEMNVFWQHMNPLLVDTYKGKIKKEDYPEALDKL
VKDITPAK

Sequences:

>Translated_408_residues
MKKLLLSISIIVGLSLLASCGLEKEYKPDIKVNEKNVSLKVWVDLNQGDFYRKVVEDFKKEHPDKDYDITVIESESGRAQ
EYVQKDPEAAADVFITPNDRLGQLVESGAVYQLTKYTDDIKKNNTPTSIQAATYQDKMYGFPVTAEAMFMYYDKRVFSED
DIKTFSGITSKGKLGINLAEAGADYRETPWFIANGTYLYGENGEDPYGTTFNTPEGVQVLNWIGELKNNPNIVAVNADEI
SALRSGKINAVFSGVWNKDAIREVLGENMGVAVYPKADFGSGQVDMMAFQGSGIYCVNAFTKSPLDAMELADYITNADVQ
EKAFKELGKIPSNLEARTSSTVEKDDVAKAVIDMTSGKHSVLMPKIPEMNVFWQHMNPLLVDTYKGKIKKEDYPEALDKL
VKDITPAK
>Mature_408_residues
MKKLLLSISIIVGLSLLASCGLEKEYKPDIKVNEKNVSLKVWVDLNQGDFYRKVVEDFKKEHPDKDYDITVIESESGRAQ
EYVQKDPEAAADVFITPNDRLGQLVESGAVYQLTKYTDDIKKNNTPTSIQAATYQDKMYGFPVTAEAMFMYYDKRVFSED
DIKTFSGITSKGKLGINLAEAGADYRETPWFIANGTYLYGENGEDPYGTTFNTPEGVQVLNWIGELKNNPNIVAVNADEI
SALRSGKINAVFSGVWNKDAIREVLGENMGVAVYPKADFGSGQVDMMAFQGSGIYCVNAFTKSPLDAMELADYITNADVQ
EKAFKELGKIPSNLEARTSSTVEKDDVAKAVIDMTSGKHSVLMPKIPEMNVFWQHMNPLLVDTYKGKIKKEDYPEALDKL
VKDITPAK

Specific function: Binding protein for cyclodextrin; involved in its cellular uptake. Interacts with all natural cyclodextrins:alpha, beta and gamma [H]

COG id: COG2182

COG function: function code G; Maltose-binding periplasmic proteins/domains

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006060
- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45403; Mature: 45403

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLLSISIIVGLSLLASCGLEKEYKPDIKVNEKNVSLKVWVDLNQGDFYRKVVEDFKK
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEEEECCCCHHHHHHHHHHHH
EHPDKDYDITVIESESGRAQEYVQKDPEAAADVFITPNDRLGQLVESGAVYQLTKYTDDI
HCCCCCCEEEEEECCCCCHHHHHHCCCCHHCEEEECCCHHHHHHHHCCCEEEEEHHHHHH
KKNNTPTSIQAATYQDKMYGFPVTAEAMFMYYDKRVFSEDDIKTFSGITSKGKLGINLAE
HCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEHHH
AGADYRETPWFIANGTYLYGENGEDPYGTTFNTPEGVQVLNWIGELKNNPNIVAVNADEI
CCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHH
SALRSGKINAVFSGVWNKDAIREVLGENMGVAVYPKADFGSGQVDMMAFQGSGIYCVNAF
HHHHCCCCEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCEEEEECC
TKSPLDAMELADYITNADVQEKAFKELGKIPSNLEARTSSTVEKDDVAKAVIDMTSGKHS
CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCE
VLMPKIPEMNVFWQHMNPLLVDTYKGKIKKEDYPEALDKLVKDITPAK
EECCCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKLLLSISIIVGLSLLASCGLEKEYKPDIKVNEKNVSLKVWVDLNQGDFYRKVVEDFKK
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEEEECCCCHHHHHHHHHHHH
EHPDKDYDITVIESESGRAQEYVQKDPEAAADVFITPNDRLGQLVESGAVYQLTKYTDDI
HCCCCCCEEEEEECCCCCHHHHHHCCCCHHCEEEECCCHHHHHHHHCCCEEEEEHHHHHH
KKNNTPTSIQAATYQDKMYGFPVTAEAMFMYYDKRVFSEDDIKTFSGITSKGKLGINLAE
HCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEHHH
AGADYRETPWFIANGTYLYGENGEDPYGTTFNTPEGVQVLNWIGELKNNPNIVAVNADEI
CCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHH
SALRSGKINAVFSGVWNKDAIREVLGENMGVAVYPKADFGSGQVDMMAFQGSGIYCVNAF
HHHHCCCCEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCEEEEECC
TKSPLDAMELADYITNADVQEKAFKELGKIPSNLEARTSSTVEKDDVAKAVIDMTSGKHS
CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCE
VLMPKIPEMNVFWQHMNPLLVDTYKGKIKKEDYPEALDKLVKDITPAK
EECCCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]