Click here to switch to the map view.

The map label for this gene is 226222713

Identifier: 226222713

GI number: 226222713

Start: 79936

End: 80271

Strand: Direct

Name: 226222713

Synonym: Lm4b_00077

Alternate gene names: NA

Gene position: 79936-80271 (Clockwise)

Preceding gene: 226222712

Following gene: 226222714

Centisome position: 2.74

GC content: 35.12

Gene sequence:

>336_bases
ATGTATATTAATTTAAAATCCAGTGATGGAAATGTGATTACAACAAAAGTTGGTTCTTGCTGGACCTGTGTATTTCTTTC
GTTCTTTGGTCCTTTACTCCGAGGAGATATTAAATTCTTCGTTCTTTATGTAATATTAGATGGAGCGGGGCTTTTCATCA
CTTTGAATTATGATAGAGATATCGGAATAGCTATCATGGCTATGGTAACTTTACTCTTTGAATCCAATTATAATACATGG
TTTATCCGCGGGAAGATGAATAACGGGTGGGAACCAGAAACAGAGAAAGATCGAGAAATATTGTTAGAAAAAGGCGTCAT
TAAAACAGAGGTATAG

Upstream 100 bases:

>100_bases
TTAAAAATATAAGATTTTTTACCTAATAAAAATGACAGCAGTATCTATATGAGACTACTAACAACTTCACCATGTGCGTT
ACAAATAAAAGGAGGAAAAA

Downstream 100 bases:

>100_bases
TATATAAATCCAATTCGAAAGGGACTCAATAAAATGAATTCAAATGAAATTTCAGAGATTATAATTCAGCAGAATAAAGG
GAAAACAATTATTAAATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MYINLKSSDGNVITTKVGSCWTCVFLSFFGPLLRGDIKFFVLYVILDGAGLFITLNYDRDIGIAIMAMVTLLFESNYNTW
FIRGKMNNGWEPETEKDREILLEKGVIKTEV

Sequences:

>Translated_111_residues
MYINLKSSDGNVITTKVGSCWTCVFLSFFGPLLRGDIKFFVLYVILDGAGLFITLNYDRDIGIAIMAMVTLLFESNYNTW
FIRGKMNNGWEPETEKDREILLEKGVIKTEV
>Mature_111_residues
MYINLKSSDGNVITTKVGSCWTCVFLSFFGPLLRGDIKFFVLYVILDGAGLFITLNYDRDIGIAIMAMVTLLFESNYNTW
FIRGKMNNGWEPETEKDREILLEKGVIKTEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12671; Mature: 12671

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYINLKSSDGNVITTKVGSCWTCVFLSFFGPLLRGDIKFFVLYVILDGAGLFITLNYDRD
CEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCEEEEEECCCC
IGIAIMAMVTLLFESNYNTWFIRGKMNNGWEPETEKDREILLEKGVIKTEV
CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCEEECCC
>Mature Secondary Structure
MYINLKSSDGNVITTKVGSCWTCVFLSFFGPLLRGDIKFFVLYVILDGAGLFITLNYDRD
CEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCEEEEEECCCC
IGIAIMAMVTLLFESNYNTWFIRGKMNNGWEPETEKDREILLEKGVIKTEV
CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA