| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226222712
Identifier: 226222712
GI number: 226222712
Start: 78870
End: 79832
Strand: Direct
Name: 226222712
Synonym: Lm4b_00076b
Alternate gene names: NA
Gene position: 78870-79832 (Clockwise)
Preceding gene: 226222711
Following gene: 226222713
Centisome position: 2.71
GC content: 35.41
Gene sequence:
>963_bases ATGAGCGGAAAAATAAAATTCAATATCGCCGAAGCTCAAAATATTAGTCTTGAGCTGAAAATTGCAGCAGGTAGGTATAC GCAAGAAACAGAAGAGCTATTAAAAGTGCTGAAAAATAATAGTTTATGTGATAAAGACCAAGATGTCGTTGAACAGAGGG GGCGAATAGAGAAGAATAACCAAAGACTTATAGAATATGAGAAATTTGTAAACACAAATCTCGCTAAATCTAATTCAGTT ATAGAAGAATTGTTTATGAGTGTAGAAGTATTGTATGCACAGCAAGTTTCTGAGTTTAGAAACCCTAATTCTGCGGGTTA TAAAGAATTAATGGGAAATGTGAAAGCGATATCATATCAAAAAATTTCACAGATTTCAGGATTGGGAGAAATGCTTACAT CGAAAGGTTCGGTGGGAGCAATTAAAGATATCAGAGACACACTACTTGGAACATTGGTAGATGATACTTACTTGAAATTA ATTGATGATACAGTTGAATATCAAGGAGAAAATAAAAATATAACTGATTTATATGGGGATAAAATATCTAAAGTGGGGTC AAGGAGAAAAAAATTGGACACTCCAACCAAATACCTTTCAACAGCCTACCTCATCTCAGACACGCTAAAAAGTTTTAACA GTTATGGAAATAGCAAAGATTCCTCTCGACTTGCAGGAGATCTAACCGGTATAGCAATAACAAAAGGTGCGGATTTTGCT GTTGGGAAATTAGCTACTACGGCATTATCTGGTTTTGGTGTAAGTGGTGTTAAAGGCGCTATCGCAGGCGCCATTATTTC CGTTGCTGCAGATAAAATTATTGATCCGACGGTTGAATATGTTAAAGAGAGCAAGGTAGAAGCAAAGAGGGATGACTGGG AAACAAAAGGTATATATAAAGGCTGGAAAAAAATTCGAGATTTAAAACTAGAATATACAGTGGGTAACTATCAAGCAAGT TAA
Upstream 100 bases:
>100_bases TTACAAAGAATCATGAAAAAGTTAAGGCGTTAGGGGAAAGTTATAAAGAACTTGATGGTCAGTTGGGACAAACCTTTAAC TATGGAATGGAGAGGACTAA
Downstream 100 bases:
>100_bases CAGTTAAAAATATAAGATTTTTTACCTAATAAAAATGACAGCAGTATCTATATGAGACTACTAACAACTTCACCATGTGC GTTACAAATAAAAGGAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSGKIKFNIAEAQNISLELKIAAGRYTQETEELLKVLKNNSLCDKDQDVVEQRGRIEKNNQRLIEYEKFVNTNLAKSNSV IEELFMSVEVLYAQQVSEFRNPNSAGYKELMGNVKAISYQKISQISGLGEMLTSKGSVGAIKDIRDTLLGTLVDDTYLKL IDDTVEYQGENKNITDLYGDKISKVGSRRKKLDTPTKYLSTAYLISDTLKSFNSYGNSKDSSRLAGDLTGIAITKGADFA VGKLATTALSGFGVSGVKGAIAGAIISVAADKIIDPTVEYVKESKVEAKRDDWETKGIYKGWKKIRDLKLEYTVGNYQAS
Sequences:
>Translated_320_residues MSGKIKFNIAEAQNISLELKIAAGRYTQETEELLKVLKNNSLCDKDQDVVEQRGRIEKNNQRLIEYEKFVNTNLAKSNSV IEELFMSVEVLYAQQVSEFRNPNSAGYKELMGNVKAISYQKISQISGLGEMLTSKGSVGAIKDIRDTLLGTLVDDTYLKL IDDTVEYQGENKNITDLYGDKISKVGSRRKKLDTPTKYLSTAYLISDTLKSFNSYGNSKDSSRLAGDLTGIAITKGADFA VGKLATTALSGFGVSGVKGAIAGAIISVAADKIIDPTVEYVKESKVEAKRDDWETKGIYKGWKKIRDLKLEYTVGNYQAS >Mature_319_residues SGKIKFNIAEAQNISLELKIAAGRYTQETEELLKVLKNNSLCDKDQDVVEQRGRIEKNNQRLIEYEKFVNTNLAKSNSVI EELFMSVEVLYAQQVSEFRNPNSAGYKELMGNVKAISYQKISQISGLGEMLTSKGSVGAIKDIRDTLLGTLVDDTYLKLI DDTVEYQGENKNITDLYGDKISKVGSRRKKLDTPTKYLSTAYLISDTLKSFNSYGNSKDSSRLAGDLTGIAITKGADFAV GKLATTALSGFGVSGVKGAIAGAIISVAADKIIDPTVEYVKESKVEAKRDDWETKGIYKGWKKIRDLKLEYTVGNYQAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35282; Mature: 35151
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKIKFNIAEAQNISLELKIAAGRYTQETEELLKVLKNNSLCDKDQDVVEQRGRIEKNN CCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC QRLIEYEKFVNTNLAKSNSVIEELFMSVEVLYAQQVSEFRNPNSAGYKELMGNVKAISYQ HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHH KISQISGLGEMLTSKGSVGAIKDIRDTLLGTLVDDTYLKLIDDTVEYQGENKNITDLYGD HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH KISKVGSRRKKLDTPTKYLSTAYLISDTLKSFNSYGNSKDSSRLAGDLTGIAITKGADFA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEECCCCHH VGKLATTALSGFGVSGVKGAIAGAIISVAADKIIDPTVEYVKESKVEAKRDDWETKGIYK HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHH GWKKIRDLKLEYTVGNYQAS HHHHHHHCEEEEEECCCCCC >Mature Secondary Structure SGKIKFNIAEAQNISLELKIAAGRYTQETEELLKVLKNNSLCDKDQDVVEQRGRIEKNN CCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC QRLIEYEKFVNTNLAKSNSVIEELFMSVEVLYAQQVSEFRNPNSAGYKELMGNVKAISYQ HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHH KISQISGLGEMLTSKGSVGAIKDIRDTLLGTLVDDTYLKLIDDTVEYQGENKNITDLYGD HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH KISKVGSRRKKLDTPTKYLSTAYLISDTLKSFNSYGNSKDSSRLAGDLTGIAITKGADFA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEECCCCHH VGKLATTALSGFGVSGVKGAIAGAIISVAADKIIDPTVEYVKESKVEAKRDDWETKGIYK HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHH GWKKIRDLKLEYTVGNYQAS HHHHHHHCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA