Click here to switch to the map view.

The map label for this gene is arcA

Identifier: 226222688

GI number: 226222688

Start: 54254

End: 55486

Strand: Direct

Name: arcA

Synonym: Lm4b_00052

Alternate gene names: 226222688

Gene position: 54254-55486 (Clockwise)

Preceding gene: 226222687

Following gene: 226222689

Centisome position: 1.86

GC content: 37.79

Gene sequence:

>1233_bases
ATGAAAATGGAACAAGCATTGAATATTACATCTGAAATTGGCAAACTCCAAACAGTTCTTGTAAAGAGGCCGGGTTCTGA
ACTCGAAAATATCACACCAGAATACCTAGAATCTTTATTATTTGATGATATACCGTATTTAAAAATGATGCAGAAGGAAC
ATGATTTTTTTGCTAAAACAATGAAAGATTCAAACATCGAAGTACTCTACTTAGAAAAACTAGCTGCTGAAGCATTACGA
GAAGCTAACAATAAAGAGTCTTTTTTAACGAAAATGATTAAAGAATCCAATCAAATGGACGAAAGTGCGCTATATGTACG
AGATTATTTGATGTCTTTTGACGAGGAAGAAATGATTAGAAAACTTATGTCCGGTTTAAAAAAATCAGAAATCCCCGAAC
GCAAAAAGAAACACTTAAATGAAATGATGGACGAACAATATCCATTTTTCCTAGATCCATTACCAAATTTGTATTTCACT
CGAGATCCAGCAGCTGTTATTGGTAACGGTGTGACGATTAATAGAATGTTCCAGCCAGCTAGAAGGCGAGAGTCGATGTT
TATCGAGCTGATTTTGAAACATCATCCTCGTTTTAGTAATCAAGAAATTCCGGTATGGTCAGGGCGCGGAGAGCCGTTTT
CTTTAGAAGGTGGAGATGAGTTAGTTCTAAATGAAGAGACTGTTCTTGTCGGTGTATCTGAGCGAACGGATGCACGAGCA
GTCGAACGGCTTGCAGAAAGTTTATTTAGTCGTTCTCCAAAAATTAAACGAGTTTTAGCTGTTGAAATTCCTGAAACAAG
GTCATTTATGCATTTGGATACGGTTTTCACCATGGTTAATTTTGCACAGTTCACGATTCATCCAGCAATTCAAAATCAAC
AAGGAGAACTTAATATATACATTTTAGAAAAAAGTGAGAATGGATTAGAAATTACTCCGCGAAGAGATTTTCAGCGCGTG
ATTGCGGAGGTTTTGGATGAGCCAGAAATTGATTTTATTCCTTGTGGCGGAGAAGATGTAATTGTTTCGGCGCGAGAGCA
GTGGAATGATGGGGCAAATACGTTAGCAATTGCTCCTGGAGAAGTAATTACATATGATCGAAATCAAGTATCAAACGATC
TGTTAAGAAGTGCGGGTATTAAGGTTCATGAAGTGATTAGTTCGGAGCTTTCTAGAGGCCGCGGGGGGCCAAGATGTATG
ACGATGCCGCTTGTTAGAGAAAATCTAAAATAA

Upstream 100 bases:

>100_bases
GGACAAAAAAAGCGCAGAATAATCTCTGTGCTTTTTTTATTTCCCGGGAAATCTCTCGCATACATGACAAACTTTTGGGG
TAATTAGTTAGGAAGAGGTG

Downstream 100 bases:

>100_bases
GTCTTTAAAAACGAGAATTCCCCTGCAAAACAAGACTTTCGTAAAAAGTATTGCCGGCTATTTTGAGATGTGCTATAGTG
TTTTCAAACCAGAATTTTCG

Product: arginine deiminase

Products: NA

Alternate protein names: ADI; Arginine dihydrolase; AD

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MKMEQALNITSEIGKLQTVLVKRPGSELENITPEYLESLLFDDIPYLKMMQKEHDFFAKTMKDSNIEVLYLEKLAAEALR
EANNKESFLTKMIKESNQMDESALYVRDYLMSFDEEEMIRKLMSGLKKSEIPERKKKHLNEMMDEQYPFFLDPLPNLYFT
RDPAAVIGNGVTINRMFQPARRRESMFIELILKHHPRFSNQEIPVWSGRGEPFSLEGGDELVLNEETVLVGVSERTDARA
VERLAESLFSRSPKIKRVLAVEIPETRSFMHLDTVFTMVNFAQFTIHPAIQNQQGELNIYILEKSENGLEITPRRDFQRV
IAEVLDEPEIDFIPCGGEDVIVSAREQWNDGANTLAIAPGEVITYDRNQVSNDLLRSAGIKVHEVISSELSRGRGGPRCM
TMPLVRENLK

Sequences:

>Translated_410_residues
MKMEQALNITSEIGKLQTVLVKRPGSELENITPEYLESLLFDDIPYLKMMQKEHDFFAKTMKDSNIEVLYLEKLAAEALR
EANNKESFLTKMIKESNQMDESALYVRDYLMSFDEEEMIRKLMSGLKKSEIPERKKKHLNEMMDEQYPFFLDPLPNLYFT
RDPAAVIGNGVTINRMFQPARRRESMFIELILKHHPRFSNQEIPVWSGRGEPFSLEGGDELVLNEETVLVGVSERTDARA
VERLAESLFSRSPKIKRVLAVEIPETRSFMHLDTVFTMVNFAQFTIHPAIQNQQGELNIYILEKSENGLEITPRRDFQRV
IAEVLDEPEIDFIPCGGEDVIVSAREQWNDGANTLAIAPGEVITYDRNQVSNDLLRSAGIKVHEVISSELSRGRGGPRCM
TMPLVRENLK
>Mature_410_residues
MKMEQALNITSEIGKLQTVLVKRPGSELENITPEYLESLLFDDIPYLKMMQKEHDFFAKTMKDSNIEVLYLEKLAAEALR
EANNKESFLTKMIKESNQMDESALYVRDYLMSFDEEEMIRKLMSGLKKSEIPERKKKHLNEMMDEQYPFFLDPLPNLYFT
RDPAAVIGNGVTINRMFQPARRRESMFIELILKHHPRFSNQEIPVWSGRGEPFSLEGGDELVLNEETVLVGVSERTDARA
VERLAESLFSRSPKIKRVLAVEIPETRSFMHLDTVFTMVNFAQFTIHPAIQNQQGELNIYILEKSENGLEITPRRDFQRV
IAEVLDEPEIDFIPCGGEDVIVSAREQWNDGANTLAIAPGEVITYDRNQVSNDLLRSAGIKVHEVISSELSRGRGGPRCM
TMPLVRENLK

Specific function: Unknown

COG id: COG2235

COG function: function code E; Arginine deiminase

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginine deiminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARCA_LISMC (C1KV84)

Other databases:

- EMBL:   FM242711
- RefSeq:   YP_002756795.1
- ProteinModelPortal:   C1KV84
- SMR:   C1KV84
- GeneID:   7702054
- GenomeReviews:   FM242711_GR
- KEGG:   lmc:Lm4b_00052
- OMA:   EEHDQFA
- ProtClustDB:   PRK01388
- GO:   GO:0005737
- HAMAP:   MF_00242
- InterPro:   IPR003198
- InterPro:   IPR003876
- PIRSF:   PIRSF006356
- PRINTS:   PR01466
- TIGRFAMs:   TIGR01078

Pfam domain/function: PF02274 Amidinotransf

EC number: =3.5.3.6

Molecular weight: Translated: 47079; Mature: 47079

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: ACT_SITE 399-399

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMEQALNITSEIGKLQTVLVKRPGSELENITPEYLESLLFDDIPYLKMMQKEHDFFAKT
CCHHHHHHHHHHHHHHHHHEEECCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MKDSNIEVLYLEKLAAEALREANNKESFLTKMIKESNQMDESALYVRDYLMSFDEEEMIR
HCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHH
KLMSGLKKSEIPERKKKHLNEMMDEQYPFFLDPLPNLYFTRDPAAVIGNGVTINRMFQPA
HHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCEECCCCHHHHCCCEEEHHHHHHH
RRRESMFIELILKHHPRFSNQEIPVWSGRGEPFSLEGGDELVLNEETVLVGVSERTDARA
HHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEECCCCCEEEEECCEEEEECCCCCHHHH
VERLAESLFSRSPKIKRVLAVEIPETRSFMHLDTVFTMVNFAQFTIHPAIQNQQGELNIY
HHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEHHHCCCCCCEEEE
ILEKSENGLEITPRRDFQRVIAEVLDEPEIDFIPCGGEDVIVSAREQWNDGANTLAIAPG
EEEECCCCCEECCHHHHHHHHHHHHCCCCCCEEECCCCCEEEECHHHCCCCCCEEEECCC
EVITYDRNQVSNDLLRSAGIKVHEVISSELSRGRGGPRCMTMPLVRENLK
CEEEECHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEECHHHHHCCC
>Mature Secondary Structure
MKMEQALNITSEIGKLQTVLVKRPGSELENITPEYLESLLFDDIPYLKMMQKEHDFFAKT
CCHHHHHHHHHHHHHHHHHEEECCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MKDSNIEVLYLEKLAAEALREANNKESFLTKMIKESNQMDESALYVRDYLMSFDEEEMIR
HCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHH
KLMSGLKKSEIPERKKKHLNEMMDEQYPFFLDPLPNLYFTRDPAAVIGNGVTINRMFQPA
HHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCEECCCCHHHHCCCEEEHHHHHHH
RRRESMFIELILKHHPRFSNQEIPVWSGRGEPFSLEGGDELVLNEETVLVGVSERTDARA
HHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEECCCCCEEEEECCEEEEECCCCCHHHH
VERLAESLFSRSPKIKRVLAVEIPETRSFMHLDTVFTMVNFAQFTIHPAIQNQQGELNIY
HHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEHHHCCCCCCEEEE
ILEKSENGLEITPRRDFQRVIAEVLDEPEIDFIPCGGEDVIVSAREQWNDGANTLAIAPG
EEEECCCCCEECCHHHHHHHHHHHHCCCCCCEEECCCCCEEEECHHHCCCCCCEEEECCC
EVITYDRNQVSNDLLRSAGIKVHEVISSELSRGRGGPRCMTMPLVRENLK
CEEEECHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEECHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA