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The map label for this gene is aguA1

Identifier: 226222683

GI number: 226222683

Start: 49358

End: 50452

Strand: Direct

Name: aguA1

Synonym: Lm4b_00047b

Alternate gene names: 226222683

Gene position: 49358-50452 (Clockwise)

Preceding gene: 226222682

Following gene: 226222684

Centisome position: 1.69

GC content: 40.09

Gene sequence:

>1095_bases
ATGAGAACGATTGATAGTTCTTCTAAAAAAGATGGATTTAGAATGCCTGGGGAATTTGAAAAACACGCTGGTTGCTATAT
TATTTGGCCAGAACGACCAGATAATTGGCGCTTAGGAGCCAAACCTGCGCAAAAAGCTTTTGTTGATGTGGCGACAGCGA
TTTCCCGTTTTGAACCAGTTACAGTTGTTGCAAGTTCAAGTCAATATGTAAATGCGAGATATATGTTGCCTGATGAAATT
CGCGTAGTGGAAATGGATAACGACGATGCTTGGGTGCGCGATTCTGGACCAACTTTTGTGGTCAATGATTCTGGTGACGT
ACGTGGTGTGGATTGGTCATTTAACTCTTGGGGTGGATTGGTCGATGGTTTGTACTTCCCGTGGGATAAAGATGATCAAG
TCGCTCAAAAAATATGCGAATTAGAGCGAAAAGATCGTTATCGCTTAGCTGATTTTGTGTTAGAAGGAGGTTCCATTCAT
GTCGATGGTGAAGGCACGCTTGTAACGACAGAAGAATGCTTATTATCAGAAGGTCGCAATCCACAACTTTCAAAACAGCA
AATCGAAATGGTTTTAAAAGAGTATTTAAATTTAGAAAAAATTATTTGGTTAAAACGAGGAATTTATTTAGATGAAACGA
ATGGTCATGTAGATAATATTTTCAATTATGTACGCCCAGGTGTAGTAGCGCTCGCGTGGACAGATGATGAAACTGATCCG
CAGTATGAAATTTCTAAAGAATGCTTTGATATTTTATCGAATGAAACCGATGCAAAAGGGCGCAAATTAGAAGTGCATAA
AATAAATGTACCAAAACCAATTTTAATTACCGATGAAGAAAGTAAAGGTGTAGATGCTGTGGAAGGAACGCTACCACGGG
AAGAAGGCGACCGACTGGCAGCAAGCTATATTAATTACTACACAGCGAATGGTGGAGTGGTTTTCCCGCTATTTGGGGAT
CCAAATGATGAACTTGCCCGCGAAAAATTACGTCAACTTTATCCAAACTGTGAAGTGGTTGGTGTGAAAGCAAGAGAAAT
TTTACTTGGCGGCGGAAATATTCACTGTATTACTCAACAGGTGCCAAGAGGATAA

Upstream 100 bases:

>100_bases
GAAAAAATCCCAATCTTAATTGGAACCGTTGTAGCGGTGATTGTTGGTGAAATATGTATTTGGCTTGCTGGGAAAAGAAA
AGACAAAGGAGAGATAGGAA

Downstream 100 bases:

>100_bases
GGAGTGAACAGCATGAATCAAAAAATAGTCGTGGCACTAGGTGGAAATGCAATATTATCGAGTGATGCCAGTGCTGAAGC
GCAACAAAGTGCACTTGAAA

Product: agmatine deiminase

Products: NA

Alternate protein names: Agmatine iminohydrolase 1

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERPDNWRLGAKPAQKAFVDVATAISRFEPVTVVASSSQYVNARYMLPDEI
RVVEMDNDDAWVRDSGPTFVVNDSGDVRGVDWSFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIH
VDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALAWTDDETDP
QYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVVFPLFGD
PNDELAREKLRQLYPNCEVVGVKAREILLGGGNIHCITQQVPRG

Sequences:

>Translated_364_residues
MRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERPDNWRLGAKPAQKAFVDVATAISRFEPVTVVASSSQYVNARYMLPDEI
RVVEMDNDDAWVRDSGPTFVVNDSGDVRGVDWSFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIH
VDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALAWTDDETDP
QYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVVFPLFGD
PNDELAREKLRQLYPNCEVVGVKAREILLGGGNIHCITQQVPRG
>Mature_364_residues
MRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERPDNWRLGAKPAQKAFVDVATAISRFEPVTVVASSSQYVNARYMLPDEI
RVVEMDNDDAWVRDSGPTFVVNDSGDVRGVDWSFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIH
VDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALAWTDDETDP
QYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVVFPLFGD
PNDELAREKLRQLYPNCEVVGVKAREILLGGGNIHCITQQVPRG

Specific function: Unknown

COG id: COG2957

COG function: function code E; Peptidylarginine deiminase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the agmatine deiminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): AGUA1_LISMF (Q725C6)

Other databases:

- EMBL:   AE017262
- RefSeq:   YP_012658.1
- ProteinModelPortal:   Q725C6
- STRING:   Q725C6
- GeneID:   2798863
- GenomeReviews:   AE017262_GR
- KEGG:   lmf:LMOf2365_0047
- TIGR:   LMOf2365_0047
- eggNOG:   COG2957
- HOGENOM:   HBG668771
- OMA:   FLIVNGG
- ProtClustDB:   PRK13551
- BioCyc:   LMON265669:LMOF2365_0047-MONOMER
- HAMAP:   MF_01841
- InterPro:   IPR017754
- InterPro:   IPR007466
- TIGRFAMs:   TIGR03380

Pfam domain/function: PF04371 PAD_porph

EC number: =3.5.3.12

Molecular weight: Translated: 41057; Mature: 41057

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: ACT_SITE 356-356

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERPDNWRLGAKPAQKAFVDVATAISRFEPV
CCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCE
TVVASSSQYVNARYMLPDEIRVVEMDNDDAWVRDSGPTFVVNDSGDVRGVDWSFNSWGGL
EEEECCCCEEEEEEECCCCEEEEEECCCCCEEECCCCEEEECCCCCEEEECCCCCCCCCC
VDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEECLLSEGRN
CCCEECCCCCCHHHHHHHHHHHHHCCCEEEHHEEECCEEEECCCCCEEEHHHHHHHCCCC
PQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALAWTDDETDP
CCCCHHHHHHHHHHHHCHHHEEHHHCCEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCC
QYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLA
CHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCHHHCCCCCCCCHHHH
ASYINYYTANGGVVFPLFGDPNDELAREKLRQLYPNCEVVGVKAREILLGGGNIHCITQQ
HHHHHEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCEEEEECC
VPRG
CCCC
>Mature Secondary Structure
MRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERPDNWRLGAKPAQKAFVDVATAISRFEPV
CCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCE
TVVASSSQYVNARYMLPDEIRVVEMDNDDAWVRDSGPTFVVNDSGDVRGVDWSFNSWGGL
EEEECCCCEEEEEEECCCCEEEEEECCCCCEEECCCCEEEECCCCCEEEECCCCCCCCCC
VDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEECLLSEGRN
CCCEECCCCCCHHHHHHHHHHHHHCCCEEEHHEEECCEEEECCCCCEEEHHHHHHHCCCC
PQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALAWTDDETDP
CCCCHHHHHHHHHHHHCHHHEEHHHCCEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCC
QYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLA
CHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCHHHCCCCCCCCHHHH
ASYINYYTANGGVVFPLFGDPNDELAREKLRQLYPNCEVVGVKAREILLGGGNIHCITQQ
HHHHHEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCEEEEECC
VPRG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA