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The map label for this gene is ynfJ [C]

Identifier: 225852025

GI number: 225852025

Start: 508742

End: 510280

Strand: Reverse

Name: ynfJ [C]

Synonym: BMEA_A0526

Alternate gene names: 225852025

Gene position: 510280-508742 (Counterclockwise)

Preceding gene: 225852026

Following gene: 225852024

Centisome position: 24.01

GC content: 61.47

Gene sequence:

>1539_bases
GTGCCTGTCGGGTGTAGTTTGATAATGAATTTCGCGGAGTTGCGTCATAATCGATATTTGAGGGTGCTGTTCGTACCCTT
TCGCACACGCGCACTGGTTCGCGGCAGCGAAATCGGCATCGTCATTGCGGGCGCGCTCATCGGTATCCTGTCCGGGCTTG
CCGTCGCGGCCATCCAGCTTTATCCGAGCGCCTTCATCGCACCCATGGCGGGCGGCATATTGATGGGCGTGCTGATCTGG
GTTCTGGCGCGCTGGCGCAAACGTCCCATCGTCGACCCCATCGAGGCGAACGCCCTCCATGGCGGACGCCTGTCACTGAC
CGACAGTTTCATTCTGGTCGGGCAGAACCTCATTTCCAAGGGCTTTGGCGCTTCGGTGGGGCTGGAAGCGGCCTATACGC
AGCTTGCGAGCGGCTTTGCCTCACGCATCGGGCGCGCACTGAAACTGCGCCGCGCCGACATGCGCACCCTCGTCGGCTGC
GGCGCGGCGGCAGCCATCGCCAGCGCCTTCAATGCGCCGCTGACCGGCTCGTTCTATGCCTTCGAGCTTATCATCGGCGT
TTATTCCATCGCCACACTTGCCCCCGTCGTGGTCGCGGCCATCATCGGGACGCTTGTGACGCAGGCCATAGGCGGCGCAC
CTTTCATTATCGATATCGGCCTGATCGACGACATCACCCCGCGCGACTATGTACCGGCCCTCATGCTCGGCTTCATTTCA
GCGGGCATCGCCATTCTCATCATGCGTGGCGTTACCCTGGTGGAAAAGGTCGCACGGCGCAGCGTGGTGCCCAATGTGCT
GGCGCCGGCAATCGTCGGCATGATTGCGTTTTTCTCGCCGCAGGTTCTGGCCTCCGGCCATGGCGCGCTGCATCTCGATC
TCAACGCCAACATCACCATTCCAGTGCTGGTGCTTCTGATCCTCACCAAATCGCTGGCATCGGCGGTTTCCATCGGATCC
GGCTTCCGCGGCGGCCTGTTTTTCGCCTCCCTGTTTCTGGGCGCGGTCGTTTCATCCTCGCTGATGGTGAGAAAAACCTT
CGGCTACTCCTTCGCAACCTGGCGCTTCCACCTGCGCGGCGAGGCCATACGCTCCGCGCACGACATCGGCTGGATACGCG
ATCTCACCGTCGCGCGCATGATGCGCCATGACGTGCGCACCGTTGCGATCGATACCGATATCGAAACCTTCCGCCACGAT
TTTCCGCTCGGCTCCACCCAGCGCGTGATCGCGGTGGACAGCGAAGGCCGCTATGTCGGCATGATCCCCGTGCCGGAGGC
CTATGGCGACAGTTTCGATACCGCAGACAAGACTCACAGTATTGCGGAGCTGCTCAAATATCAGGATGAGTTCCTTCTGC
CACAAATGAACGCAAAGGAAGCCGTCGCCCGCTTCGACCGGGCGGAAAGCGAAGCGCTGGCGGTCATCGACAATGCGCAG
GACCGCAAGGTTCTGGGGCTTTTGAGCGAAGCGCACACATTGCGCCGCTACAGCGAAGAACTGGACCGCCGCCGCCGCGA
AGTTGCCGGCGAAGTTTGA

Upstream 100 bases:

>100_bases
CATATGTCGCAATCAATAAGGCTTGGTTATTTCTTTTGGTCTATGATCCGGCGGCAAATGACGATGATGCAGTGTGTGTG
GCAGCCGCTCGCAGACTGAA

Downstream 100 bases:

>100_bases
CGGGCCCATCATAAAGGTGTAGCTCATCGCCCGTATTTTCCGGCCCGGTCGTTCCGGCGATTGCCGGTCGTCTTTTCCCT
TTCACGCATTGCCAGACGGG

Product: chloride channel core protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MPVGCSLIMNFAELRHNRYLRVLFVPFRTRALVRGSEIGIVIAGALIGILSGLAVAAIQLYPSAFIAPMAGGILMGVLIW
VLARWRKRPIVDPIEANALHGGRLSLTDSFILVGQNLISKGFGASVGLEAAYTQLASGFASRIGRALKLRRADMRTLVGC
GAAAAIASAFNAPLTGSFYAFELIIGVYSIATLAPVVVAAIIGTLVTQAIGGAPFIIDIGLIDDITPRDYVPALMLGFIS
AGIAILIMRGVTLVEKVARRSVVPNVLAPAIVGMIAFFSPQVLASGHGALHLDLNANITIPVLVLLILTKSLASAVSIGS
GFRGGLFFASLFLGAVVSSSLMVRKTFGYSFATWRFHLRGEAIRSAHDIGWIRDLTVARMMRHDVRTVAIDTDIETFRHD
FPLGSTQRVIAVDSEGRYVGMIPVPEAYGDSFDTADKTHSIAELLKYQDEFLLPQMNAKEAVARFDRAESEALAVIDNAQ
DRKVLGLLSEAHTLRRYSEELDRRRREVAGEV

Sequences:

>Translated_512_residues
MPVGCSLIMNFAELRHNRYLRVLFVPFRTRALVRGSEIGIVIAGALIGILSGLAVAAIQLYPSAFIAPMAGGILMGVLIW
VLARWRKRPIVDPIEANALHGGRLSLTDSFILVGQNLISKGFGASVGLEAAYTQLASGFASRIGRALKLRRADMRTLVGC
GAAAAIASAFNAPLTGSFYAFELIIGVYSIATLAPVVVAAIIGTLVTQAIGGAPFIIDIGLIDDITPRDYVPALMLGFIS
AGIAILIMRGVTLVEKVARRSVVPNVLAPAIVGMIAFFSPQVLASGHGALHLDLNANITIPVLVLLILTKSLASAVSIGS
GFRGGLFFASLFLGAVVSSSLMVRKTFGYSFATWRFHLRGEAIRSAHDIGWIRDLTVARMMRHDVRTVAIDTDIETFRHD
FPLGSTQRVIAVDSEGRYVGMIPVPEAYGDSFDTADKTHSIAELLKYQDEFLLPQMNAKEAVARFDRAESEALAVIDNAQ
DRKVLGLLSEAHTLRRYSEELDRRRREVAGEV
>Mature_511_residues
PVGCSLIMNFAELRHNRYLRVLFVPFRTRALVRGSEIGIVIAGALIGILSGLAVAAIQLYPSAFIAPMAGGILMGVLIWV
LARWRKRPIVDPIEANALHGGRLSLTDSFILVGQNLISKGFGASVGLEAAYTQLASGFASRIGRALKLRRADMRTLVGCG
AAAAIASAFNAPLTGSFYAFELIIGVYSIATLAPVVVAAIIGTLVTQAIGGAPFIIDIGLIDDITPRDYVPALMLGFISA
GIAILIMRGVTLVEKVARRSVVPNVLAPAIVGMIAFFSPQVLASGHGALHLDLNANITIPVLVLLILTKSLASAVSIGSG
FRGGLFFASLFLGAVVSSSLMVRKTFGYSFATWRFHLRGEAIRSAHDIGWIRDLTVARMMRHDVRTVAIDTDIETFRHDF
PLGSTQRVIAVDSEGRYVGMIPVPEAYGDSFDTADKTHSIAELLKYQDEFLLPQMNAKEAVARFDRAESEALAVIDNAQD
RKVLGLLSEAHTLRRYSEELDRRRREVAGEV

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 55140; Mature: 55009

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVGCSLIMNFAELRHNRYLRVLFVPFRTRALVRGSEIGIVIAGALIGILSGLAVAAIQL
CCCCHHHHHHHHHHHCCCEEEEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
YPSAFIAPMAGGILMGVLIWVLARWRKRPIVDPIEANALHGGRLSLTDSFILVGQNLISK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHC
GFGASVGLEAAYTQLASGFASRIGRALKLRRADMRTLVGCGAAAAIASAFNAPLTGSFYA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHH
FELIIGVYSIATLAPVVVAAIIGTLVTQAIGGAPFIIDIGLIDDITPRDYVPALMLGFIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
AGIAILIMRGVTLVEKVARRSVVPNVLAPAIVGMIAFFSPQVLASGHGALHLDLNANITI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCHH
PVLVLLILTKSLASAVSIGSGFRGGLFFASLFLGAVVSSSLMVRKTFGYSFATWRFHLRG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECH
EAIRSAHDIGWIRDLTVARMMRHDVRTVAIDTDIETFRHDFPLGSTQRVIAVDSEGRYVG
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCEEEEECCCCCEEE
MIPVPEAYGDSFDTADKTHSIAELLKYQDEFLLPQMNAKEAVARFDRAESEALAVIDNAQ
EEECCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCC
DRKVLGLLSEAHTLRRYSEELDRRRREVAGEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PVGCSLIMNFAELRHNRYLRVLFVPFRTRALVRGSEIGIVIAGALIGILSGLAVAAIQL
CCCHHHHHHHHHHHCCCEEEEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
YPSAFIAPMAGGILMGVLIWVLARWRKRPIVDPIEANALHGGRLSLTDSFILVGQNLISK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHC
GFGASVGLEAAYTQLASGFASRIGRALKLRRADMRTLVGCGAAAAIASAFNAPLTGSFYA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHH
FELIIGVYSIATLAPVVVAAIIGTLVTQAIGGAPFIIDIGLIDDITPRDYVPALMLGFIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
AGIAILIMRGVTLVEKVARRSVVPNVLAPAIVGMIAFFSPQVLASGHGALHLDLNANITI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCHH
PVLVLLILTKSLASAVSIGSGFRGGLFFASLFLGAVVSSSLMVRKTFGYSFATWRFHLRG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECH
EAIRSAHDIGWIRDLTVARMMRHDVRTVAIDTDIETFRHDFPLGSTQRVIAVDSEGRYVG
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCEEEEECCCCCEEE
MIPVPEAYGDSFDTADKTHSIAELLKYQDEFLLPQMNAKEAVARFDRAESEALAVIDNAQ
EEECCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCC
DRKVLGLLSEAHTLRRYSEELDRRRREVAGEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]