Definition | Brucella melitensis ATCC 23457 chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_012441 |
Length | 2,125,701 |
Click here to switch to the map view.
The map label for this gene is thiO [H]
Identifier: 225851744
GI number: 225851744
Start: 226091
End: 227095
Strand: Reverse
Name: thiO [H]
Synonym: BMEA_A0224
Alternate gene names: 225851744
Gene position: 227095-226091 (Counterclockwise)
Preceding gene: 225851745
Following gene: 225851743
Centisome position: 10.68
GC content: 63.48
Gene sequence:
>1005_bases ATGCGCGTGACAATCATCGGAGCGGGTGTCGCTGGCCTTGCCACCGCCGCGGAATTTACCGATCAGGGCCATGCCGTCAC CGTCATCGCCAAAAGTGCCGAGATCGGCTCGGATAGCTGCTCGTGGTTTGCTGGCGGCATGCTGGCTCCCTGGTGCGAGG GCGAAAGTGCGGAAGAACCCGTGGTGCGCCTTGGACAGGATGCCATCGGCTGGTGGGAGCGTCATGTCTCGACCGTCAGG CGCAAGGGGACGCTCGTGCTCTCGCACACGCGGGACATGAGCGAGTTGCGCCGCTTCGCCCGACGTACAGAAGAGCATGA AACCATAGATCAGAACCACCTCGACACGCTGGAGCCGGATCTGGCCGGGCGGTTCCGGCAGGGCCTGTTCTTTGCCGATG AAGGCCATCTCGATCCGCGCCGGACGTTGATCGAACTTGCCGAACGGCTGCGGCAACAGGGCGTGGTCTTTCATCTGGGC GTCGACGCCAAAGACATATCCGTCGATGCCGATATCACCGTCGATGCGCGCGGCCTTGCCGCCCGCGACAGCTTGCAGGA CCTGCGCGGCGTCAAGGGCGAGATGCTGATCGTGCGCTCGCGCGACATCAATCTTTCGCGGCCCGTGCGGCTTCTGCATC CGCGTATCCCGCTTTACATCGTGCCGCGCGGCGACGGCATTCACATGATCGGCGCAACCATGATCGAAAGCGACGACCGC CGCGGCATCAGCGTGCGTTCGACACTGGAACTCTTAAGTGCGGCCTATGCGCTGCACCCGGCCTTCGGCGAGGCGGAAAT CCTCGAAGTGGGTGTCGATGCCCGCCCTGCCTTTGCCGACAATCTGCCGCGTGTGAGACGTCGCGGCGACACCGTCTATG TCAACGGCCTTTACCGGCACGGTTTCCTGCTTTCACCGGCGGTCGCCCGCATGGCGGTGGCAGTTGCGACCAATGCGCAG GCTGAGGCCGAAACCATGACCGACTTTGTGGAGGACTATGCATGA
Upstream 100 bases:
>100_bases GCGCAATCCGCGCGGCTGACAGTCTGAAGGTCGGTCAGGGCCATGGGCCGGTGCATCATTTTCACGCCCTTTGGAAACAG GCAGAAAGGGAGGCGATCTG
Downstream 100 bases:
>100_bases CCATCGTTTTGAACGGCGAAGCACACGAAACGGCCTCGGCCACGCTCGCCGCCCTTCTCAACGAAATCGAACTTGATGAA GCGGTGGTCGCAACCGCGCT
Product: glycine oxidase ThiO
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MRVTIIGAGVAGLATAAEFTDQGHAVTVIAKSAEIGSDSCSWFAGGMLAPWCEGESAEEPVVRLGQDAIGWWERHVSTVR RKGTLVLSHTRDMSELRRFARRTEEHETIDQNHLDTLEPDLAGRFRQGLFFADEGHLDPRRTLIELAERLRQQGVVFHLG VDAKDISVDADITVDARGLAARDSLQDLRGVKGEMLIVRSRDINLSRPVRLLHPRIPLYIVPRGDGIHMIGATMIESDDR RGISVRSTLELLSAAYALHPAFGEAEILEVGVDARPAFADNLPRVRRRGDTVYVNGLYRHGFLLSPAVARMAVAVATNAQ AEAETMTDFVEDYA
Sequences:
>Translated_334_residues MRVTIIGAGVAGLATAAEFTDQGHAVTVIAKSAEIGSDSCSWFAGGMLAPWCEGESAEEPVVRLGQDAIGWWERHVSTVR RKGTLVLSHTRDMSELRRFARRTEEHETIDQNHLDTLEPDLAGRFRQGLFFADEGHLDPRRTLIELAERLRQQGVVFHLG VDAKDISVDADITVDARGLAARDSLQDLRGVKGEMLIVRSRDINLSRPVRLLHPRIPLYIVPRGDGIHMIGATMIESDDR RGISVRSTLELLSAAYALHPAFGEAEILEVGVDARPAFADNLPRVRRRGDTVYVNGLYRHGFLLSPAVARMAVAVATNAQ AEAETMTDFVEDYA >Mature_334_residues MRVTIIGAGVAGLATAAEFTDQGHAVTVIAKSAEIGSDSCSWFAGGMLAPWCEGESAEEPVVRLGQDAIGWWERHVSTVR RKGTLVLSHTRDMSELRRFARRTEEHETIDQNHLDTLEPDLAGRFRQGLFFADEGHLDPRRTLIELAERLRQQGVVFHLG VDAKDISVDADITVDARGLAARDSLQDLRGVKGEMLIVRSRDINLSRPVRLLHPRIPLYIVPRGDGIHMIGATMIESDDR RGISVRSTLELLSAAYALHPAFGEAEILEVGVDARPAFADNLPRVRRRGDTVYVNGLYRHGFLLSPAVARMAVAVATNAQ AEAETMTDFVEDYA
Specific function: May have amino acid oxidase activity in the biosynthesis of thiazole when cysteine gives its thiol group to be inserted into the thiazole molecule and the rest of the molecule is deaminated to give pyruvic acid and ammonia [H]
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 - InterPro: IPR012727 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: NA
Molecular weight: Translated: 36782; Mature: 36782
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVTIIGAGVAGLATAAEFTDQGHAVTVIAKSAEIGSDSCSWFAGGMLAPWCEGESAEEP CEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCH VVRLGQDAIGWWERHVSTVRRKGTLVLSHTRDMSELRRFARRTEEHETIDQNHLDTLEPD HHHHCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH LAGRFRQGLFFADEGHLDPRRTLIELAERLRQQGVVFHLGVDAKDISVDADITVDARGLA HHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCEEECCCEEECCCCCH ARDSLQDLRGVKGEMLIVRSRDINLSRPVRLLHPRIPLYIVPRGDGIHMIGATMIESDDR HHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCCEEEEECCCCEEEEEHEEECCCCC RGISVRSTLELLSAAYALHPAFGEAEILEVGVDARPAFADNLPRVRRRGDTVYVNGLYRH CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHCCCHHHHHCCCEEEEEEHHHC GFLLSPAVARMAVAVATNAQAEAETMTDFVEDYA CEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRVTIIGAGVAGLATAAEFTDQGHAVTVIAKSAEIGSDSCSWFAGGMLAPWCEGESAEEP CEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCH VVRLGQDAIGWWERHVSTVRRKGTLVLSHTRDMSELRRFARRTEEHETIDQNHLDTLEPD HHHHCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH LAGRFRQGLFFADEGHLDPRRTLIELAERLRQQGVVFHLGVDAKDISVDADITVDARGLA HHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCEEECCCEEECCCCCH ARDSLQDLRGVKGEMLIVRSRDINLSRPVRLLHPRIPLYIVPRGDGIHMIGATMIESDDR HHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCCEEEEECCCCEEEEEHEEECCCCC RGISVRSTLELLSAAYALHPAFGEAEILEVGVDARPAFADNLPRVRRRGDTVYVNGLYRH CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHCCCHHHHHCCCEEEEEEHHHC GFLLSPAVARMAVAVATNAQAEAETMTDFVEDYA CEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371431 [H]