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The map label for this gene is yliD [C]

Identifier: 225686217

GI number: 225686217

Start: 370875

End: 371783

Strand: Reverse

Name: yliD [C]

Synonym: BMEA_B0385

Alternate gene names: 225686217

Gene position: 371783-370875 (Counterclockwise)

Preceding gene: 225686218

Following gene: 225686216

Centisome position: 31.36

GC content: 60.62

Gene sequence:

>909_bases
ATGCGGTCATCGATCCACGCATCAAGGTTACGTAAGATGGGCCAGTCCATTCCCGCTTCCACAGGGCCGATGGCCCGTTC
CGCGAACCGCTTTTTACAGAACCGCGCCGCGATATTCGGCCTTGTCCTGCTGACGCCTCTTCTATTCGCGGTGCTGACCT
ATCCGCTATGGCTGCCCTACAAGCCGAACGATATCGACCTTATGGCGATGAACTCCGCTCCAAGCTGGAAACACTGGTTT
GGAACCGATGGAGTGGGCCGCGACGTATTCGCCCGAACAATGGAAGGCGGGCGCATTTCGCTCCTCGTCGCCGTTTCATC
CGTGGTGCTTTCCACAGCCATCGGCTTCCTGATCGGTGCGATTTCCGCCCTTGGCGGGCGCTGGGCAGATGCGATTGCCA
TGCGGTCGGTCGATCTTGCCATGACGCTGCCGCCGGTCATCTTCCTGCTAGTGCTGGCCTCCATCATCGGTTCGGGCATC
TGGTCCACGGTGGTTGTGATTGCACTCCTTTCATGGCCCGTGCTTTCACGCATGATCCGTGCACGCCTTCTGGAGCTGCG
CGAACGCGAATTCGTCATGGCGTCACGTGGCATGGGGGCGGGCCTCGGCCACCTCCTGTTCCGCCACGGACTGCCCAACT
CAATCGATATTCTCGTCGTCTATGCAACCTTGCAGGTGGCCAACGCCATCCTGCTGGAAGCCGGTCTCTCCTTCCTTGGC
CTCGGCGTGCCGCCACCGGCGGCAAGTTGGAGCAACATGCTCAACGCCGCCCGCTCCACCGCCGTATTGGAACAGTTCCC
ATGGCAATGGCTCTTCCCCGGAGGCGCGCTCGTGCTGGCCGTATTGGCGATCAACTTTATCGGTGATGGTCTGAGGGATG
CCTTTGACCCCCGCGCAGAACTCAACTGA

Upstream 100 bases:

>100_bases
ATCAATGCAGTCGAAACCCGCGACTATCCGGTCATCATGGGCGCAACGCTTGTGATTGGCGCCTGTGTCATCATCGTCAA
TATCCTGACCGATCTGGCCT

Downstream 100 bases:

>100_bases
ACCAGAAAGCGAATTTGAAATGTCGAAATTTTTTGGCGTTGTCCCTCCCGTCGTCACTCCGCTTAACGATGACCATTCGG
TCGATTACGATTCCTATACC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRSSIHASRLRKMGQSIPASTGPMARSANRFLQNRAAIFGLVLLTPLLFAVLTYPLWLPYKPNDIDLMAMNSAPSWKHWF
GTDGVGRDVFARTMEGGRISLLVAVSSVVLSTAIGFLIGAISALGGRWADAIAMRSVDLAMTLPPVIFLLVLASIIGSGI
WSTVVVIALLSWPVLSRMIRARLLELREREFVMASRGMGAGLGHLLFRHGLPNSIDILVVYATLQVANAILLEAGLSFLG
LGVPPPAASWSNMLNAARSTAVLEQFPWQWLFPGGALVLAVLAINFIGDGLRDAFDPRAELN

Sequences:

>Translated_302_residues
MRSSIHASRLRKMGQSIPASTGPMARSANRFLQNRAAIFGLVLLTPLLFAVLTYPLWLPYKPNDIDLMAMNSAPSWKHWF
GTDGVGRDVFARTMEGGRISLLVAVSSVVLSTAIGFLIGAISALGGRWADAIAMRSVDLAMTLPPVIFLLVLASIIGSGI
WSTVVVIALLSWPVLSRMIRARLLELREREFVMASRGMGAGLGHLLFRHGLPNSIDILVVYATLQVANAILLEAGLSFLG
LGVPPPAASWSNMLNAARSTAVLEQFPWQWLFPGGALVLAVLAINFIGDGLRDAFDPRAELN
>Mature_302_residues
MRSSIHASRLRKMGQSIPASTGPMARSANRFLQNRAAIFGLVLLTPLLFAVLTYPLWLPYKPNDIDLMAMNSAPSWKHWF
GTDGVGRDVFARTMEGGRISLLVAVSSVVLSTAIGFLIGAISALGGRWADAIAMRSVDLAMTLPPVIFLLVLASIIGSGI
WSTVVVIALLSWPVLSRMIRARLLELREREFVMASRGMGAGLGHLLFRHGLPNSIDILVVYATLQVANAILLEAGLSFLG
LGVPPPAASWSNMLNAARSTAVLEQFPWQWLFPGGALVLAVLAINFIGDGLRDAFDPRAELN

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=260, Percent_Identity=37.6923076923077, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1787760, Length=259, Percent_Identity=38.6100386100386, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1787498, Length=301, Percent_Identity=35.5481727574751, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1789889, Length=246, Percent_Identity=40.2439024390244, Blast_Score=171, Evalue=7e-44,
Organism=Escherichia coli, GI1789964, Length=290, Percent_Identity=38.6206896551724, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1788505, Length=282, Percent_Identity=28.3687943262411, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI1787549, Length=279, Percent_Identity=26.1648745519713, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32569; Mature: 32569

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSIHASRLRKMGQSIPASTGPMARSANRFLQNRAAIFGLVLLTPLLFAVLTYPLWLPY
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KPNDIDLMAMNSAPSWKHWFGTDGVGRDVFARTMEGGRISLLVAVSSVVLSTAIGFLIGA
CCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHH
ISALGGRWADAIAMRSVDLAMTLPPVIFLLVLASIIGSGIWSTVVVIALLSWPVLSRMIR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ARLLELREREFVMASRGMGAGLGHLLFRHGLPNSIDILVVYATLQVANAILLEAGLSFLG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
LGVPPPAASWSNMLNAARSTAVLEQFPWQWLFPGGALVLAVLAINFIGDGLRDAFDPRAE
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCC
LN
CC
>Mature Secondary Structure
MRSSIHASRLRKMGQSIPASTGPMARSANRFLQNRAAIFGLVLLTPLLFAVLTYPLWLPY
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KPNDIDLMAMNSAPSWKHWFGTDGVGRDVFARTMEGGRISLLVAVSSVVLSTAIGFLIGA
CCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHH
ISALGGRWADAIAMRSVDLAMTLPPVIFLLVLASIIGSGIWSTVVVIALLSWPVLSRMIR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ARLLELREREFVMASRGMGAGLGHLLFRHGLPNSIDILVVYATLQVANAILLEAGLSFLG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
LGVPPPAASWSNMLNAARSTAVLEQFPWQWLFPGGALVLAVLAINFIGDGLRDAFDPRAE
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCC
LN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA