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The map label for this gene is fnrA [H]

Identifier: 225686110

GI number: 225686110

Start: 243256

End: 243951

Strand: Direct

Name: fnrA [H]

Synonym: BMEA_B0263

Alternate gene names: 225686110

Gene position: 243256-243951 (Clockwise)

Preceding gene: 225686109

Following gene: 225686111

Centisome position: 20.52

GC content: 58.05

Gene sequence:

>696_bases
ATGGCCATGATAGATCGCGGTCTTGTCAGGAAATTATCATTGTTCGCAAAAATGCGCGATGATGAGCTGGACAGGCTTGT
GTCTTACGCTACATCCCGGCGGGTCCCGCAGGGTGAATCCATTTTTGAGCAGGGCGATGAAGCGTCTTGCTTCTACCTGC
TGCTGCATGGACGGCTGAAGGTCAATCAGGTGACGCCCGATGGCCAGCAGATCATCGTGCGGATGGTGCATCCGGGCGAT
CTGTTCGGTTTTGCCCGCGCTTTGCAACGCAACGATTATCCCGGCACCGCAACAGCGGTGATGGAGAGTATCGTTCTTGC
ATGGCCGACCGAGCTCTGGGATTATTTCGTGGAGCAGAATCCCGGTCTGGCTATGAACGCCATCCAGACCATCGGCAAGC
GCCTGGAAGAGGCCCATACCCGTATCCGCGAAATGTCGACCGAGGAAGTGGAGCGCCGCGTGGCCCATGCTGTGCTGCGC
CTTTCGCGGCAGGCTGGCAAAAAGGAAGAAACGGGCATCCGCATCGATTTTCCCATTTCCCGGCAGGACATTGCCGAAAT
GACCGGCACGACGCTGCACACGGTTTCGCGCATTCTCAGCAATTGGGAAACCAAGGGACTTGTGCAGGGAGGGCGCCAGA
AACTTCTGGTGCTCGATTCCGCCGGCTTGCGCCGCCTTGCCGAAGGCGAGGACTGA

Upstream 100 bases:

>100_bases
TGGTTTTTTCTTGAATGCCTGACCTTATGCCCCAAAGACTATTCCAACCCTGCATTGCTGTGATAAGGCAAGCGCGGGGT
TTCGGAATAGGGGAAGCGCG

Downstream 100 bases:

>100_bases
ATACCTCGCCTCCACAGCCTCAAGAAACGTATTTCACTTTCTCTTCGGGCCGACTATTCCTATAGCTCGAAAAGGAGAGG
GTATGCACATCAGCAGGAAA

Product: transcriptional activator protein fnrA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MAMIDRGLVRKLSLFAKMRDDELDRLVSYATSRRVPQGESIFEQGDEASCFYLLLHGRLKVNQVTPDGQQIIVRMVHPGD
LFGFARALQRNDYPGTATAVMESIVLAWPTELWDYFVEQNPGLAMNAIQTIGKRLEEAHTRIREMSTEEVERRVAHAVLR
LSRQAGKKEETGIRIDFPISRQDIAEMTGTTLHTVSRILSNWETKGLVQGGRQKLLVLDSAGLRRLAEGED

Sequences:

>Translated_231_residues
MAMIDRGLVRKLSLFAKMRDDELDRLVSYATSRRVPQGESIFEQGDEASCFYLLLHGRLKVNQVTPDGQQIIVRMVHPGD
LFGFARALQRNDYPGTATAVMESIVLAWPTELWDYFVEQNPGLAMNAIQTIGKRLEEAHTRIREMSTEEVERRVAHAVLR
LSRQAGKKEETGIRIDFPISRQDIAEMTGTTLHTVSRILSNWETKGLVQGGRQKLLVLDSAGLRRLAEGED
>Mature_230_residues
AMIDRGLVRKLSLFAKMRDDELDRLVSYATSRRVPQGESIFEQGDEASCFYLLLHGRLKVNQVTPDGQQIIVRMVHPGDL
FGFARALQRNDYPGTATAVMESIVLAWPTELWDYFVEQNPGLAMNAIQTIGKRLEEAHTRIREMSTEEVERRVAHAVLRL
SRQAGKKEETGIRIDFPISRQDIAEMTGTTLHTVSRILSNWETKGLVQGGRQKLLVLDSAGLRRLAEGED

Specific function: Transcriptional regulator of arginine deiminase [H]

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787595, Length=220, Percent_Identity=24.0909090909091, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1789756, Length=203, Percent_Identity=22.6600985221675, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 26106; Mature: 25975

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMIDRGLVRKLSLFAKMRDDELDRLVSYATSRRVPQGESIFEQGDEASCFYLLLHGRLK
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEEEECCEE
VNQVTPDGQQIIVRMVHPGDLFGFARALQRNDYPGTATAVMESIVLAWPTELWDYFVEQN
EEEECCCHHHEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC
PGLAMNAIQTIGKRLEEAHTRIREMSTEEVERRVAHAVLRLSRQAGKKEETGIRIDFPIS
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC
RQDIAEMTGTTLHTVSRILSNWETKGLVQGGRQKLLVLDSAGLRRLAEGED
HHHHHHHHCHHHHHHHHHHHCHHHHHHHHCCCCEEEEECCHHHHHHCCCCC
>Mature Secondary Structure 
AMIDRGLVRKLSLFAKMRDDELDRLVSYATSRRVPQGESIFEQGDEASCFYLLLHGRLK
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEEEECCEE
VNQVTPDGQQIIVRMVHPGDLFGFARALQRNDYPGTATAVMESIVLAWPTELWDYFVEQN
EEEECCCHHHEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC
PGLAMNAIQTIGKRLEEAHTRIREMSTEEVERRVAHAVLRLSRQAGKKEETGIRIDFPIS
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC
RQDIAEMTGTTLHTVSRILSNWETKGLVQGGRQKLLVLDSAGLRRLAEGED
HHHHHHHHCHHHHHHHHHHHCHHHHHHHHCCCCEEEEECCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226670 [H]