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The map label for this gene is yngJ [H]

Identifier: 225686072

GI number: 225686072

Start: 206690

End: 207844

Strand: Reverse

Name: yngJ [H]

Synonym: BMEA_B0220

Alternate gene names: 225686072

Gene position: 207844-206690 (Counterclockwise)

Preceding gene: 225686073

Following gene: 225686071

Centisome position: 17.53

GC content: 58.1

Gene sequence:

>1155_bases
ATGATCCGCGACCCGGAAACACTTGAAATTCTGCGCGACACTGTCAGCCAGTTCGTTTCGGAAACGCTCATCCCCAGGGA
GAACGAAGTCGCCGAAACAAACGCCATTCCGGCCGATATCATTGCGCAGATGAAGGAGCTTGGCTTCTTCGGCCTCACCA
TCCCGGAAGAATTCGGCGGGCTTGGCCTGACGATGGAAGAAGAGGTGAATGTCGCGTTTGAACTGGGGCGGGCTTCGCCT
GCCTTCCGTTCCTATATCGGAACGAATAACGGTATCGGGTCAATCGGCATTCTCATCGACGGCACGGATGAGCAGAAGCG
CAATTATCTGCCCAGGCTCGCCAGCGGTGAGTTGCTCAGCTCCTTCTGCCTGACCAAGCCGGATGCAGGCTCGGATGCAG
CCTCGCTGAAAACCACGGCCGTGCGCGACGGCGATTTCTATATTCTCAACGGAACCAAACGTTTCATCACCAATGCGCCG
ATCGCGGATATCTTCACCGTGATGGCCCGCACGGCGGCGGATGTCAAAGGGGCAGACGGGATCAGCGCCTTTATCGTTGA
GCGCAACAGCCCCGGCCTTTCGCTTGGCAAGCCTGACCAGAAAATGGGCCAGAAAGGCGCGCTCACCAGCAATGTCATCT
TCGAGAATGTCCGGGTTCCGGCCAGCCAGTTGATCGGCGGCGTCGAAGGAAAAGGCTTCAAGACGGCAATGAAGGTGCTG
GACAAGGGACGCCTGCATATTGCGGCGCTCAGCACCGGAGCCGCCGAACGTATGCTTGCCGATACGCTGGCCTATGCGCT
GGATCGCAAGCAATTCGGCAAGCCGATTGCCGATTTCCAGCTTATTCAAGCCATGCTCGCGGACAGCAAGGCAGAGATTT
ATGCCGCCAAATGCATGGTTCTCGATGCGGCGCGCAAGCGCGACAGCGGGCAGAACGTCAGCACCGAGGCTTCCTGCGCC
AAGATGTTTGCAACGGAAATGTGCGGCCGGGTTGCCGACCGCTGCGTGCAGATACATGGCGGCGCCGGTTATGTCAGCGA
ATATGCGATCGAGCGTTTCTACCGCGATGTTCGCCTTTTCCGCATTTACGAGGGAACGACCCAGATCCAGCAGATCGTCA
TCGCAAGAAACATGATCCGCGAAGCCCGGCGCTAA

Upstream 100 bases:

>100_bases
GCCTGATCGAGATGGTTCACAACATCAGCTCCGCTGTCCCGTAATCTGCCGGAAAGCGGAGCCTTGCAGAAAAGGCCGGC
AACGGCCGCTAGGAGAATGC

Downstream 100 bases:

>100_bases
CCGGACTTTTCAATGAACCGGCATTCGGACAGTGGCGCGGCGATGGTCGTGCAACTGAACGATGGGAGTATGCCTTCTGA
GGAGCACGCGCAGAACAATG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MIRDPETLEILRDTVSQFVSETLIPRENEVAETNAIPADIIAQMKELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASP
AFRSYIGTNNGIGSIGILIDGTDEQKRNYLPRLASGELLSSFCLTKPDAGSDAASLKTTAVRDGDFYILNGTKRFITNAP
IADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSNVIFENVRVPASQLIGGVEGKGFKTAMKVL
DKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTEASCA
KMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREARR

Sequences:

>Translated_384_residues
MIRDPETLEILRDTVSQFVSETLIPRENEVAETNAIPADIIAQMKELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASP
AFRSYIGTNNGIGSIGILIDGTDEQKRNYLPRLASGELLSSFCLTKPDAGSDAASLKTTAVRDGDFYILNGTKRFITNAP
IADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSNVIFENVRVPASQLIGGVEGKGFKTAMKVL
DKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTEASCA
KMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREARR
>Mature_384_residues
MIRDPETLEILRDTVSQFVSETLIPRENEVAETNAIPADIIAQMKELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASP
AFRSYIGTNNGIGSIGILIDGTDEQKRNYLPRLASGELLSSFCLTKPDAGSDAASLKTTAVRDGDFYILNGTKRFITNAP
IADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSNVIFENVRVPASQLIGGVEGKGFKTAMKVL
DKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTEASCA
KMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI76496475, Length=375, Percent_Identity=40.2666666666667, Blast_Score=265, Evalue=8e-71,
Organism=Homo sapiens, GI4557235, Length=375, Percent_Identity=40.2666666666667, Blast_Score=264, Evalue=9e-71,
Organism=Homo sapiens, GI4557231, Length=368, Percent_Identity=38.3152173913043, Blast_Score=258, Evalue=6e-69,
Organism=Homo sapiens, GI187960098, Length=368, Percent_Identity=38.3152173913043, Blast_Score=258, Evalue=7e-69,
Organism=Homo sapiens, GI21361497, Length=379, Percent_Identity=39.0501319261214, Blast_Score=256, Evalue=4e-68,
Organism=Homo sapiens, GI4501859, Length=369, Percent_Identity=35.5013550135501, Blast_Score=253, Evalue=1e-67,
Organism=Homo sapiens, GI4557233, Length=379, Percent_Identity=37.9947229551451, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI7656849, Length=368, Percent_Identity=38.3152173913043, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI226958412, Length=369, Percent_Identity=35.7723577235772, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI226958414, Length=371, Percent_Identity=35.0404312668464, Blast_Score=228, Evalue=9e-60,
Organism=Homo sapiens, GI4501857, Length=387, Percent_Identity=35.4005167958656, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI4503943, Length=388, Percent_Identity=33.5051546391753, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI7669494, Length=376, Percent_Identity=33.5106382978723, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI48976061, Length=402, Percent_Identity=29.1044776119403, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI211971008, Length=402, Percent_Identity=29.1044776119403, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI38505218, Length=394, Percent_Identity=28.4263959390863, Blast_Score=141, Evalue=9e-34,
Organism=Homo sapiens, GI156104864, Length=302, Percent_Identity=25.8278145695364, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI156104866, Length=302, Percent_Identity=25.8278145695364, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI87081958, Length=381, Percent_Identity=33.0708661417323, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1786223, Length=385, Percent_Identity=30.3896103896104, Blast_Score=156, Evalue=3e-39,
Organism=Escherichia coli, GI87081702, Length=297, Percent_Identity=31.6498316498317, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI87082384, Length=296, Percent_Identity=26.6891891891892, Blast_Score=79, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17570075, Length=371, Percent_Identity=38.8140161725067, Blast_Score=259, Evalue=1e-69,
Organism=Caenorhabditis elegans, GI71985184, Length=366, Percent_Identity=39.8907103825137, Blast_Score=254, Evalue=6e-68,
Organism=Caenorhabditis elegans, GI17569725, Length=383, Percent_Identity=37.597911227154, Blast_Score=252, Evalue=3e-67,
Organism=Caenorhabditis elegans, GI17506239, Length=372, Percent_Identity=38.1720430107527, Blast_Score=251, Evalue=4e-67,
Organism=Caenorhabditis elegans, GI17508101, Length=363, Percent_Identity=37.7410468319559, Blast_Score=250, Evalue=7e-67,
Organism=Caenorhabditis elegans, GI17534899, Length=377, Percent_Identity=36.604774535809, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17533517, Length=379, Percent_Identity=34.3007915567282, Blast_Score=224, Evalue=5e-59,
Organism=Caenorhabditis elegans, GI17538396, Length=373, Percent_Identity=32.7077747989276, Blast_Score=221, Evalue=7e-58,
Organism=Caenorhabditis elegans, GI71985192, Length=313, Percent_Identity=39.6166134185303, Blast_Score=204, Evalue=8e-53,
Organism=Caenorhabditis elegans, GI71990804, Length=293, Percent_Identity=36.518771331058, Blast_Score=181, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17534353, Length=362, Percent_Identity=30.939226519337, Blast_Score=175, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI32563615, Length=233, Percent_Identity=41.6309012875536, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17505929, Length=384, Percent_Identity=30.7291666666667, Blast_Score=170, Evalue=9e-43,
Organism=Caenorhabditis elegans, GI17551932, Length=377, Percent_Identity=28.6472148541114, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI71982178, Length=269, Percent_Identity=34.2007434944238, Blast_Score=150, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI17531909, Length=249, Percent_Identity=35.3413654618474, Blast_Score=148, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17562446, Length=360, Percent_Identity=31.1111111111111, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17531913, Length=178, Percent_Identity=32.0224719101124, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI86563381, Length=286, Percent_Identity=24.8251748251748, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI86563383, Length=286, Percent_Identity=24.8251748251748, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24660351, Length=375, Percent_Identity=38.9333333333333, Blast_Score=266, Evalue=1e-71,
Organism=Drosophila melanogaster, GI24666513, Length=368, Percent_Identity=37.2282608695652, Blast_Score=252, Evalue=4e-67,
Organism=Drosophila melanogaster, GI21356377, Length=376, Percent_Identity=38.2978723404255, Blast_Score=246, Evalue=1e-65,
Organism=Drosophila melanogaster, GI24646207, Length=377, Percent_Identity=37.1352785145889, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI281363737, Length=346, Percent_Identity=39.0173410404624, Blast_Score=241, Evalue=7e-64,
Organism=Drosophila melanogaster, GI21355753, Length=381, Percent_Identity=32.5459317585302, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI19920834, Length=387, Percent_Identity=32.0413436692506, Blast_Score=167, Evalue=8e-42,
Organism=Drosophila melanogaster, GI24652780, Length=363, Percent_Identity=23.1404958677686, Blast_Score=82, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41761; Mature: 41761

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRDPETLEILRDTVSQFVSETLIPRENEVAETNAIPADIIAQMKELGFFGLTIPEEFGG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHCCCEECCCHHHHCC
LGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQKRNYLPRLASGELLS
CCCEEHHCCCEEEEECCCCHHHHHHCCCCCCCCEEEEEEECCCHHHHHCCCCCCCHHHHH
SFCLTKPDAGSDAASLKTTAVRDGDFYILNGTKRFITNAPIADIFTVMARTAADVKGADG
HHHCCCCCCCCCHHHCCCEEEECCCEEEECCCHHHHCCCCHHHHHHHHHHHHHCCCCCCC
ISAFIVERNSPGLSLGKPDQKMGQKGALTSNVIFENVRVPASQLIGGVEGKGFKTAMKVL
CEEEEEECCCCCCCCCCCHHHHCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHH
DKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMV
HCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH
LDAARKRDSGQNVSTEASCAKMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLF
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHE
RIYEGTTQIQQIVIARNMIREARR
EEECCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRDPETLEILRDTVSQFVSETLIPRENEVAETNAIPADIIAQMKELGFFGLTIPEEFGG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHCCCEECCCHHHHCC
LGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQKRNYLPRLASGELLS
CCCEEHHCCCEEEEECCCCHHHHHHCCCCCCCCEEEEEEECCCHHHHHCCCCCCCHHHHH
SFCLTKPDAGSDAASLKTTAVRDGDFYILNGTKRFITNAPIADIFTVMARTAADVKGADG
HHHCCCCCCCCCHHHCCCEEEECCCEEEECCCHHHHCCCCHHHHHHHHHHHHHCCCCCCC
ISAFIVERNSPGLSLGKPDQKMGQKGALTSNVIFENVRVPASQLIGGVEGKGFKTAMKVL
CEEEEEECCCCCCCCCCCHHHHCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHH
DKGRLHIAALSTGAAERMLADTLAYALDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMV
HCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH
LDAARKRDSGQNVSTEASCAKMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLF
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHE
RIYEGTTQIQQIVIARNMIREARR
EEECCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]