Click here to switch to the map view.

The map label for this gene is yqjF [H]

Identifier: 225686046

GI number: 225686046

Start: 175960

End: 176361

Strand: Reverse

Name: yqjF [H]

Synonym: BMEA_B0191

Alternate gene names: 225686046

Gene position: 176361-175960 (Counterclockwise)

Preceding gene: 225686047

Following gene: 225686045

Centisome position: 14.88

GC content: 55.97

Gene sequence:

>402_bases
ATGTCCTCTATCACTCCGAAGGCCAATGGCGCTGCCACGCTTATCATACGTGTTTTTCTGTCGGTTCTTTTCATCATCGC
CGGCTACAACAAGCTGACCGCCCTTGATGGAACCGCCGATTACTTCGCTTCCATTGGCCTTCCCATGCCAATCGTGACGG
CGGTTGTCGTCGGACTGATCGAATTTGTCGGTGGCCTCGCCATTCTATTCGGTTTCAAGACCCGCATTGCTGCCGTGATC
GTCGGCCTCTTCACCCTCGGCGCAACGCTGGTGGCCCATATGGACTTCGCCGAAGGCATGAACCTGCTGATAGCGCAGAA
GAACCTTGCCATCGCTGGAGGTCTTTTCCTTCTCTTCCTGCATGGTGCAGGGTCACTCTCGATCGACGCCAGACGCGGTT
GA

Upstream 100 bases:

>100_bases
TGCACGCAAATAGTGAACAAACTGTCGAGAATTAAGCATCTTTTCTTGACAATTACGAATCGCTAATTGATGGATCAATT
CAACAGGAGAAAGCCCACGC

Downstream 100 bases:

>100_bases
CCACCAGTTCTGGACTTCCCCACAAAAAGCCGTGCCAAAATGCGCGGCTTTTTCATATTTCACATGACTGCCACTTGTTT
CTCCATCGAGATTTTACGAA

Product: DoxX family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSSITPKANGAATLIIRVFLSVLFIIAGYNKLTALDGTADYFASIGLPMPIVTAVVVGLIEFVGGLAILFGFKTRIAAVI
VGLFTLGATLVAHMDFAEGMNLLIAQKNLAIAGGLFLLFLHGAGSLSIDARRG

Sequences:

>Translated_133_residues
MSSITPKANGAATLIIRVFLSVLFIIAGYNKLTALDGTADYFASIGLPMPIVTAVVVGLIEFVGGLAILFGFKTRIAAVI
VGLFTLGATLVAHMDFAEGMNLLIAQKNLAIAGGLFLLFLHGAGSLSIDARRG
>Mature_132_residues
SSITPKANGAATLIIRVFLSVLFIIAGYNKLTALDGTADYFASIGLPMPIVTAVVVGLIEFVGGLAILFGFKTRIAAVIV
GLFTLGATLVAHMDFAEGMNLLIAQKNLAIAGGLFLLFLHGAGSLSIDARRG

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI87082210, Length=123, Percent_Identity=43.9024390243902, Blast_Score=94, Evalue=3e-21,
Organism=Escherichia coli, GI145693171, Length=123, Percent_Identity=37.3983739837398, Blast_Score=81, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 13781; Mature: 13650

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSITPKANGAATLIIRVFLSVLFIIAGYNKLTALDGTADYFASIGLPMPIVTAVVVGLI
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHCCCCHHHHHHHHHHHH
EFVGGLAILFGFKTRIAAVIVGLFTLGATLVAHMDFAEGMNLLIAQKNLAIAGGLFLLFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
HGAGSLSIDARRG
HCCCCEEECCCCC
>Mature Secondary Structure 
SSITPKANGAATLIIRVFLSVLFIIAGYNKLTALDGTADYFASIGLPMPIVTAVVVGLI
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHCCCCHHHHHHHHHHHH
EFVGGLAILFGFKTRIAAVIVGLFTLGATLVAHMDFAEGMNLLIAQKNLAIAGGLFLLFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
HGAGSLSIDARRG
HCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]