Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
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Accession | NC_012442 |
Length | 1,185,518 |
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The map label for this gene is tag [H]
Identifier: 225686040
GI number: 225686040
Start: 169521
End: 170177
Strand: Direct
Name: tag [H]
Synonym: BMEA_B0185
Alternate gene names: 225686040
Gene position: 169521-170177 (Clockwise)
Preceding gene: 225686037
Following gene: 225686041
Centisome position: 14.3
GC content: 54.95
Gene sequence:
>657_bases ATGAGCGATATGGCCGAGGCAAGGGCAGGGCTGGTCGTTGGGGCCGATGGCAGGACGCGCTGTTTCTGTCCGGGCGAATT GCCGGATTATCTCGCCTATCACGATAATGAATGGGGCGTGCCTGTTGCCGATGATTTCCGGCTTTTTGAGAAAATCTGTC TTGAAGGGTTCCAGTCGGGATTGTCGTGGCTTACGATTTTGCGCAAGCGCGAAAATTTCCGCGCGGCCTTTGATGGTTTC AATTTTCATCGCATTGCCACCTATGACGAAAGCGATGTGGAACGCCTTCTGGCGGACAAGGGCATCGTGCGCCATCGCGG CAAGATCGTTTCGGTCATCAACAATGCCGGGCGCGCCATCGAGCTGATCGAGGAGAAGGGGTCGCTTGCCGCCTATTTCT GGTCGTTCGAGCCGGGCGCGGAAAACAGGCCCGCAGTGGTCGATTATCCCACGCTTGTCGCAAACCCCATAACCGCAACC TCGACCCGCATTTCAAAAGACCTGAAAAAACGCGGCTGGTCTTTCGTCGGTCCAACCACGGTCTATGCCTTCATGCAGGC GATGGGCCTCGTGAACGATCATATCGAGGGTTGCCATTGCCGTGCAACGATCGAAAAATTACGACAGAATTTCAAAAGGC CGGGCAAAAAGCTTTAA
Upstream 100 bases:
>100_bases TTTCGGCGCGTGTTTCGTCTTGAGGGCCACGCAATTGAACTTGTGGTTAGTGTCGGGTTGCGCAACATGATTAAGGATGA ATGAAGCGGAGAGCCGGGAA
Downstream 100 bases:
>100_bases TTGCCAGCCGATGCGGTTTCTGCCAGAAACGCATCTGGATGCATTCACGCACGTCTTTATTCCACAGCCGGTTCCATTTA TGGGAAACGCGCTCTGGTAA
Product: DNA-3-methyladenine glycosylase I
Products: NA
Alternate protein names: 3-methyladenine-DNA glycosylase I, constitutive; TAG I; DNA-3-methyladenine glycosidase I; DNA-3-methyladenine glycosylase I [H]
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSDMAEARAGLVVGADGRTRCFCPGELPDYLAYHDNEWGVPVADDFRLFEKICLEGFQSGLSWLTILRKRENFRAAFDGF NFHRIATYDESDVERLLADKGIVRHRGKIVSVINNAGRAIELIEEKGSLAAYFWSFEPGAENRPAVVDYPTLVANPITAT STRISKDLKKRGWSFVGPTTVYAFMQAMGLVNDHIEGCHCRATIEKLRQNFKRPGKKL
Sequences:
>Translated_218_residues MSDMAEARAGLVVGADGRTRCFCPGELPDYLAYHDNEWGVPVADDFRLFEKICLEGFQSGLSWLTILRKRENFRAAFDGF NFHRIATYDESDVERLLADKGIVRHRGKIVSVINNAGRAIELIEEKGSLAAYFWSFEPGAENRPAVVDYPTLVANPITAT STRISKDLKKRGWSFVGPTTVYAFMQAMGLVNDHIEGCHCRATIEKLRQNFKRPGKKL >Mature_217_residues SDMAEARAGLVVGADGRTRCFCPGELPDYLAYHDNEWGVPVADDFRLFEKICLEGFQSGLSWLTILRKRENFRAAFDGFN FHRIATYDESDVERLLADKGIVRHRGKIVSVINNAGRAIELIEEKGSLAAYFWSFEPGAENRPAVVDYPTLVANPITATS TRISKDLKKRGWSFVGPTTVYAFMQAMGLVNDHIEGCHCRATIEKLRQNFKRPGKKL
Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine from the damaged DNA polymer formed by alkylation lesions [H]
COG id: COG2818
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789971, Length=182, Percent_Identity=50.5494505494505, Blast_Score=186, Evalue=9e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005019 - InterPro: IPR011257 - InterPro: IPR004597 [H]
Pfam domain/function: PF03352 Adenine_glyco [H]
EC number: =3.2.2.20 [H]
Molecular weight: Translated: 24520; Mature: 24389
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDMAEARAGLVVGADGRTRCFCPGELPDYLAYHDNEWGVPVADDFRLFEKICLEGFQSG CCCHHHHHCCEEECCCCCEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH LSWLTILRKRENFRAAFDGFNFHRIATYDESDVERLLADKGIVRHRGKIVSVINNAGRAI HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCHHHHCCHHHHHHHCCCHHH ELIEEKGSLAAYFWSFEPGAENRPAVVDYPTLVANPITATSTRISKDLKKRGWSFVGPTT HHHHCCCCEEEEEEEECCCCCCCCEEEECCHHHCCCCCHHHHHHHHHHHHCCCCCCCHHH VYAFMQAMGLVNDHIEGCHCRATIEKLRQNFKRPGKKL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDMAEARAGLVVGADGRTRCFCPGELPDYLAYHDNEWGVPVADDFRLFEKICLEGFQSG CCHHHHHCCEEECCCCCEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH LSWLTILRKRENFRAAFDGFNFHRIATYDESDVERLLADKGIVRHRGKIVSVINNAGRAI HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCHHHHCCHHHHHHHCCCHHH ELIEEKGSLAAYFWSFEPGAENRPAVVDYPTLVANPITATSTRISKDLKKRGWSFVGPTT HHHHCCCCEEEEEEEECCCCCCCCEEEECCHHHCCCCCHHHHHHHHHHHHCCCCCCCHHH VYAFMQAMGLVNDHIEGCHCRATIEKLRQNFKRPGKKL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3536912; 3520491; 8041620; 9278503 [H]