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The map label for this gene is glcF [H]

Identifier: 225686037

GI number: 225686037

Start: 165932

End: 167221

Strand: Direct

Name: glcF [H]

Synonym: BMEA_B0182

Alternate gene names: 225686037

Gene position: 165932-167221 (Clockwise)

Preceding gene: 225686036

Following gene: 225686040

Centisome position: 14.0

GC content: 59.46

Gene sequence:

>1290_bases
ATGCAGACCCATTTCAGCCCTGAACAATTGCGCGATCCCGGCGTGCTTGAAGCCGAAAAGATTTTGCGCAAATGTGTGCA
TTGCGGTTTCTGCACCGCGACCTGCCCGACCTATGTGACGCTCGGCAACGAACTCGACAGCCCGCGCGGGCGCATCTATC
TCATCAAGGACATGCTGGAAAACGGCCGCCCGGCGGATGAGGAGATCGTGCGCCATGTGGACCGCTGCCTCTCGTGCCTG
GCCTGCATGACCACATGCCCGTCCGGCGTCAATTATATGCATCTGGTCGATCATGCCCGCGCGCATATTGAAAAGACCTA
TAAGCGCCCCTTCATGAACCGCCTGCTGCGGTCGGTTCTGGCGCAGGTTCTGCCCTATCCGGCGCGGTTTCGCCTGGCGT
TGAAACTTGCAAAATTGGGCAAGCCTTTCGCTTCCCTGTTTCGTAAAAGTCCGGTTCTGCGGCCTGTGGCTGCAATGCTG
GACCTTGCACCGCAGAGCCTGCCGGCAATGCCTGCCGCCACCAATGCGGTCAGGGGCGAAAAGCGCGGCCGGGTCGCAAT
CCTTAACGGATGCGCGCAGCCGGTGCTCAATCCCGGCATCAATGCCGCAACCCTGCGCCTTCTCAATCGTTTCGACATCG
AAGTGGCAACGCCCAAGGGCGAGGGATGCTGTGGCTCGCTGGTCCACCATATGGGCCGTGAGGAACAGGCGCGCCACAAT
GTCGATGTGTGGACGCGCGAGATTGAAACAGGTGGGCTGGACGCGATCATCGTGACGGCCTCAGGCTGTGGCACGACGAT
CAAGGATTACGGCTATATGCTGCGTCTTGATCCTGCCTATAAGGATAAGGCGGCGCGCGTATCGGCACTTGCGAAGGATA
TCACGGAATATCTCGCCACGCTGGAACTGCCGGAACCCGATGCGCCGAAGACATTGACGGTTGCCTATCATTCGGCCTGC
TCCATGCAGCACGGCCAGAAAATCGTGCGCGAGCCGAAGGATTTGCTGGTGAAGGCCGGTTTTACAGTAAAGGAACCGCT
GGAAGGGCATCTTTGCTGCGGCTCGGCTGGCACCTACAATATCATGCAGCCGGAAATCGCCACGAAGCTGCGCGACCGCA
AGGTGAAGAATATCGAGGCAACCGGGGCTGCCCTGATCGCCACTGGCAATATCGGCTGCATGACGCAGATCGCAACCGGC
AGCGACCTTCCTATCGTTCATACGGTGGAACTGATCGATTGGGCCTATGGCGGGCCCACCCCGCAAGCACTCGAGAAAGC
AGGGGCTTGA

Upstream 100 bases:

>100_bases
GCGCTTGCCGCCCTTTCCGCCCGTTTGAAACAGCAGTTCGACCCGGAGAATATTCTCAATCCGGGGCGCATGTATCCCCA
TCAGGCTGGAGCTTGAAACC

Downstream 100 bases:

>100_bases
GAAAATCGCCGCGTAATATCTGATAGAATAAAGCCGGGCATCGCCCGGCTTTATTGCTTTGTTTTTTGTAATGTTTAGAG
CGCGTTTCGATCTGATTCAA

Product: hypothetical protein

Products: 2-oxo acid; H2O2

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MQTHFSPEQLRDPGVLEAEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVDRCLSCL
ACMTTCPSGVNYMHLVDHARAHIEKTYKRPFMNRLLRSVLAQVLPYPARFRLALKLAKLGKPFASLFRKSPVLRPVAAML
DLAPQSLPAMPAATNAVRGEKRGRVAILNGCAQPVLNPGINAATLRLLNRFDIEVATPKGEGCCGSLVHHMGREEQARHN
VDVWTREIETGGLDAIIVTASGCGTTIKDYGYMLRLDPAYKDKAARVSALAKDITEYLATLELPEPDAPKTLTVAYHSAC
SMQHGQKIVREPKDLLVKAGFTVKEPLEGHLCCGSAGTYNIMQPEIATKLRDRKVKNIEATGAALIATGNIGCMTQIATG
SDLPIVHTVELIDWAYGGPTPQALEKAGA

Sequences:

>Translated_429_residues
MQTHFSPEQLRDPGVLEAEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVDRCLSCL
ACMTTCPSGVNYMHLVDHARAHIEKTYKRPFMNRLLRSVLAQVLPYPARFRLALKLAKLGKPFASLFRKSPVLRPVAAML
DLAPQSLPAMPAATNAVRGEKRGRVAILNGCAQPVLNPGINAATLRLLNRFDIEVATPKGEGCCGSLVHHMGREEQARHN
VDVWTREIETGGLDAIIVTASGCGTTIKDYGYMLRLDPAYKDKAARVSALAKDITEYLATLELPEPDAPKTLTVAYHSAC
SMQHGQKIVREPKDLLVKAGFTVKEPLEGHLCCGSAGTYNIMQPEIATKLRDRKVKNIEATGAALIATGNIGCMTQIATG
SDLPIVHTVELIDWAYGGPTPQALEKAGA
>Mature_429_residues
MQTHFSPEQLRDPGVLEAEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVDRCLSCL
ACMTTCPSGVNYMHLVDHARAHIEKTYKRPFMNRLLRSVLAQVLPYPARFRLALKLAKLGKPFASLFRKSPVLRPVAAML
DLAPQSLPAMPAATNAVRGEKRGRVAILNGCAQPVLNPGINAATLRLLNRFDIEVATPKGEGCCGSLVHHMGREEQARHN
VDVWTREIETGGLDAIIVTASGCGTTIKDYGYMLRLDPAYKDKAARVSALAKDITEYLATLELPEPDAPKTLTVAYHSAC
SMQHGQKIVREPKDLLVKAGFTVKEPLEGHLCCGSAGTYNIMQPEIATKLRDRKVKNIEATGAALIATGNIGCMTQIATG
SDLPIVHTVELIDWAYGGPTPQALEKAGA

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=430, Percent_Identity=42.7906976744186, Blast_Score=335, Evalue=3e-93,
Organism=Escherichia coli, GI1788576, Length=416, Percent_Identity=24.0384615384615, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1786497, Length=229, Percent_Identity=23.5807860262009, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: 1.1.3.15

Molecular weight: Translated: 46786; Mature: 46786

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTHFSPEQLRDPGVLEAEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLE
CCCCCCHHHHCCCCCHHHHHHHHHHHHCCCHHHCCCCEEEECCCCCCCCCEEEEEHHHHH
NGRPADEEIVRHVDRCLSCLACMTTCPSGVNYMHLVDHARAHIEKTYKRPFMNRLLRSVL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQVLPYPARFRLALKLAKLGKPFASLFRKSPVLRPVAAMLDLAPQSLPAMPAATNAVRGE
HHHCCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCC
KRGRVAILNGCAQPVLNPGINAATLRLLNRFDIEVATPKGEGCCGSLVHHMGREEQARHN
CCCCEEEECCCHHHHCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCHHHHHCC
VDVWTREIETGGLDAIIVTASGCGTTIKDYGYMLRLDPAYKDKAARVSALAKDITEYLAT
HHHHHEECCCCCCCEEEEEECCCCCCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
LELPEPDAPKTLTVAYHSACSMQHGQKIVREPKDLLVKAGFTVKEPLEGHLCCGSAGTYN
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCHHHHHEECCCCCCCCCCCCEEECCCCCCC
IMQPEIATKLRDRKVKNIEATGAALIATGNIGCMTQIATGSDLPIVHTVELIDWAYGGPT
CCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCCCEEHHHHHHHHCCCCC
PQALEKAGA
HHHHHHCCC
>Mature Secondary Structure
MQTHFSPEQLRDPGVLEAEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLE
CCCCCCHHHHCCCCCHHHHHHHHHHHHCCCHHHCCCCEEEECCCCCCCCCEEEEEHHHHH
NGRPADEEIVRHVDRCLSCLACMTTCPSGVNYMHLVDHARAHIEKTYKRPFMNRLLRSVL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQVLPYPARFRLALKLAKLGKPFASLFRKSPVLRPVAAMLDLAPQSLPAMPAATNAVRGE
HHHCCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCC
KRGRVAILNGCAQPVLNPGINAATLRLLNRFDIEVATPKGEGCCGSLVHHMGREEQARHN
CCCCEEEECCCHHHHCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCHHHHHCC
VDVWTREIETGGLDAIIVTASGCGTTIKDYGYMLRLDPAYKDKAARVSALAKDITEYLAT
HHHHHEECCCCCCCEEEEEECCCCCCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
LELPEPDAPKTLTVAYHSACSMQHGQKIVREPKDLLVKAGFTVKEPLEGHLCCGSAGTYN
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCHHHHHEECCCCCCCCCCCCEEECCCCCCC
IMQPEIATKLRDRKVKNIEATGAALIATGNIGCMTQIATGSDLPIVHTVELIDWAYGGPT
CCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCCCEEHHHHHHHHCCCCC
PQALEKAGA
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (S)-2-hydroxy acid; O2

Specific reaction: (S)-2-hydroxy acid + O2 = 2-oxo acid + H2O2

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8606183; 9278503 [H]