Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
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Accession | NC_012442 |
Length | 1,185,518 |
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The map label for this gene is virB1 [H]
Identifier: 225685936
GI number: 225685936
Start: 66527
End: 67243
Strand: Reverse
Name: virB1 [H]
Synonym: BMEA_B0073
Alternate gene names: 225685936
Gene position: 67243-66527 (Counterclockwise)
Preceding gene: 225685937
Following gene: 225685935
Centisome position: 5.67
GC content: 56.62
Gene sequence:
>717_bases ATGGTGCCATTCCTTGTCCTCGCGCAACAATGCGCACCGACTGTTGCACCTCAGACTATGGCAGCAATCGTGCAGGTCGA GTCGGGCTTCAATCCTTATGCAATAGGCGTCGTTGGTGGGCGGTTGGTCCGTCAACCCGTTTCCCTTGATGAAGCAATCA CGACAGCACAGTCACTGGAAGCCAAAGGCTGGAATTTCTCTTTGGGTATTGCTCAAGTCAACAGGTACAATCTGCCGAAA TATGGCAGCACCTACGCACAAGCGTTCGACCCCTGCAAGAACCTGAAGATGGGATCCAAGATCCTTGAAGACTGCTACCG TCGGGCCATCGTGAAGATGCCCGGTCAGGAACAAGGCGCGCTTCGCGCCGCATTCTCCTGTTACTACGCCGGCAACTTTA CGGGCGGCTTCAAGACGAAGCCCGGCAGTCCCAGCTACGTGCAGAAGGTCGTGGCAAGCGCCGACGTGACCACAAAGCCG ATTGTTGTCGTGCCCATGATCCGGAAAACGCCGGATGCGGCGGCAGCAGTAGCTGCCCCAGTAAAAAAACGACAGCCGGC TGATCGTAATTCTGTTCTTGTCGATCTGCATCCATCATCGCAGTCGATGCCAGCCACCGGCGCGGCGAACGCGCCTGTAA GGCTGAAGACAGAGCAGCCGGCGACAACCGATGCGCCGCCAGGGAAGGATAATACGGACGGCGTAGTTGTTTTCTAA
Upstream 100 bases:
>100_bases ATATCGGCTTAAACAACACTACCCAATAATGACCGATATCGCTGATCTATAATTAAGGCTATCATAATAATCGTCCATTC TCTGAGAAGGAGACGATCCT
Downstream 100 bases:
>100_bases CCCATCATCCGATCAGGCACGCATATAAAATTGATGATGGTGGAGGGTCCGAACAGGACTGGGAAGGTTATAGCGGCGGG CGGCGACGATAGGAGGCAGT
Product: Lytic transglycosylase catalytic
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MVPFLVLAQQCAPTVAPQTMAAIVQVESGFNPYAIGVVGGRLVRQPVSLDEAITTAQSLEAKGWNFSLGIAQVNRYNLPK YGSTYAQAFDPCKNLKMGSKILEDCYRRAIVKMPGQEQGALRAAFSCYYAGNFTGGFKTKPGSPSYVQKVVASADVTTKP IVVVPMIRKTPDAAAAVAAPVKKRQPADRNSVLVDLHPSSQSMPATGAANAPVRLKTEQPATTDAPPGKDNTDGVVVF
Sequences:
>Translated_238_residues MVPFLVLAQQCAPTVAPQTMAAIVQVESGFNPYAIGVVGGRLVRQPVSLDEAITTAQSLEAKGWNFSLGIAQVNRYNLPK YGSTYAQAFDPCKNLKMGSKILEDCYRRAIVKMPGQEQGALRAAFSCYYAGNFTGGFKTKPGSPSYVQKVVASADVTTKP IVVVPMIRKTPDAAAAVAAPVKKRQPADRNSVLVDLHPSSQSMPATGAANAPVRLKTEQPATTDAPPGKDNTDGVVVF >Mature_238_residues MVPFLVLAQQCAPTVAPQTMAAIVQVESGFNPYAIGVVGGRLVRQPVSLDEAITTAQSLEAKGWNFSLGIAQVNRYNLPK YGSTYAQAFDPCKNLKMGSKILEDCYRRAIVKMPGQEQGALRAAFSCYYAGNFTGGFKTKPGSPSYVQKVVASADVTTKP IVVVPMIRKTPDAAAAVAAPVKKRQPADRNSVLVDLHPSSQSMPATGAANAPVRLKTEQPATTDAPPGKDNTDGVVVF
Specific function: The virB operon is essential for intracellular survival and is not involved in the invasion process. Constitutes a major determinant of virulence in mice [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the virb1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008258 [H]
Pfam domain/function: PF01464 SLT [H]
EC number: NA
Molecular weight: Translated: 25228; Mature: 25228
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPFLVLAQQCAPTVAPQTMAAIVQVESGFNPYAIGVVGGRLVRQPVSLDEAITTAQSLE CCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHH AKGWNFSLGIAQVNRYNLPKYGSTYAQAFDPCKNLKMGSKILEDCYRRAIVKMPGQEQGA CCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHH LRAAFSCYYAGNFTGGFKTKPGSPSYVQKVVASADVTTKPIVVVPMIRKTPDAAAAVAAP HHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHH VKKRQPADRNSVLVDLHPSSQSMPATGAANAPVRLKTEQPATTDAPPGKDNTDGVVVF HHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEC >Mature Secondary Structure MVPFLVLAQQCAPTVAPQTMAAIVQVESGFNPYAIGVVGGRLVRQPVSLDEAITTAQSLE CCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHH AKGWNFSLGIAQVNRYNLPKYGSTYAQAFDPCKNLKMGSKILEDCYRRAIVKMPGQEQGA CCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHH LRAAFSCYYAGNFTGGFKTKPGSPSYVQKVVASADVTTKPIVVVPMIRKTPDAAAAVAAP HHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHH VKKRQPADRNSVLVDLHPSSQSMPATGAANAPVRLKTEQPATTDAPPGKDNTDGVVVF HHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10940027 [H]