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The map label for this gene is yedY [H]

Identifier: 225685886

GI number: 225685886

Start: 16528

End: 17316

Strand: Reverse

Name: yedY [H]

Synonym: BMEA_B0020

Alternate gene names: 225685886

Gene position: 17316-16528 (Counterclockwise)

Preceding gene: 225685887

Following gene: 225685884

Centisome position: 1.46

GC content: 57.92

Gene sequence:

>789_bases
ATGACAGGTCCGCGTCTTTCCAGACGGCGTTTTCTCACCTTCACCGGCATGGCCGGTTCGGCTGTCCTGCTTAGCGGCTG
CGATGCGTTTGATTATCTGGGCAGCGACGACAATGCCGTCCGTCAGGTTCTCGAAAAGGCCAATGATCTTTCCTACACCG
TGCAGCACAAGCTGGAAGGTCCGGGTGCGCTGGCGCGGGAATATGGCGAAAGCGAAATTCGGCAGGGACAAAAGCCGAAT
GGCGAAACCAACCCCTCCACGGAAGAATATGACCGCCTTCGCGAAAACGCATTCGCCGATTATCGCCTGGAGGTACACGG
TTTGGTGGAAAAGCCGCTAAGCTTTTCTCTCAATGAGTTGCACAACATGCCCGCACGCACCCAGATCACCCGCCACGACT
GCGTGGAAGGCTGGAGCACGATTGCCAAATGGACCGGCGTTCCGCTCGGTCATATCCTTGCGCTGGCAAAGCCCAAAGCA
GGCGCACATTATGTGGTGTTCCATTGTTTCGACGAAGTGGACACGCCGCAAGGCCCGGACCTGTTCTATGGCAGCATCGA
CCTCATCGATGCGCAGCACCCGCAGACCATCCTTGCCTATGGCCTGAACGGCAGCGCACTTCCGGTCGCCAATGGCGCGC
CGCTTCGTGTGCGCGTGGAACGGCAGCTGGGCTACAAGATGAGCAAATATGTCAAATCCATCGAGCTGGTTTCCAGTTTC
GCCGCCATTCAGGGCGGCCGGGGCGGCTATTGGGAAGACCAGGGATATGACTGGTACGGCGGAATATAA

Upstream 100 bases:

>100_bases
TTGCGATGGTGCTTGCGGCAGGCCCTTTCAACGAGTTGCGCTCGATGATTTCCGGCTGGTACCGCATCGACCGGACGGAC
GAAAAGACGGAGAAACAATC

Downstream 100 bases:

>100_bases
GTACCGGATCGGGCGGCTGTCTTTTAAGGCCGCCGCCCATTTTCACATCATGGCAAACGGCGGCGAAGATCGCTCACCGG
ACGCTCGATGAGATGGGGCG

Product: oxidoreductase, molybdopterin-binding

Products: nitrate; NADH; H+

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTGPRLSRRRFLTFTGMAGSAVLLSGCDAFDYLGSDDNAVRQVLEKANDLSYTVQHKLEGPGALAREYGESEIRQGQKPN
GETNPSTEEYDRLRENAFADYRLEVHGLVEKPLSFSLNELHNMPARTQITRHDCVEGWSTIAKWTGVPLGHILALAKPKA
GAHYVVFHCFDEVDTPQGPDLFYGSIDLIDAQHPQTILAYGLNGSALPVANGAPLRVRVERQLGYKMSKYVKSIELVSSF
AAIQGGRGGYWEDQGYDWYGGI

Sequences:

>Translated_262_residues
MTGPRLSRRRFLTFTGMAGSAVLLSGCDAFDYLGSDDNAVRQVLEKANDLSYTVQHKLEGPGALAREYGESEIRQGQKPN
GETNPSTEEYDRLRENAFADYRLEVHGLVEKPLSFSLNELHNMPARTQITRHDCVEGWSTIAKWTGVPLGHILALAKPKA
GAHYVVFHCFDEVDTPQGPDLFYGSIDLIDAQHPQTILAYGLNGSALPVANGAPLRVRVERQLGYKMSKYVKSIELVSSF
AAIQGGRGGYWEDQGYDWYGGI
>Mature_261_residues
TGPRLSRRRFLTFTGMAGSAVLLSGCDAFDYLGSDDNAVRQVLEKANDLSYTVQHKLEGPGALAREYGESEIRQGQKPNG
ETNPSTEEYDRLRENAFADYRLEVHGLVEKPLSFSLNELHNMPARTQITRHDCVEGWSTIAKWTGVPLGHILALAKPKAG
AHYVVFHCFDEVDTPQGPDLFYGSIDLIDAQHPQTILAYGLNGSALPVANGAPLRVRVERQLGYKMSKYVKSIELVSSFA
AIQGGRGGYWEDQGYDWYGGI

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=148, Percent_Identity=36.4864864864865, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: 1.7.1.1

Molecular weight: Translated: 28969; Mature: 28838

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPRLSRRRFLTFTGMAGSAVLLSGCDAFDYLGSDDNAVRQVLEKANDLSYTVQHKLEG
CCCCCCCCCEEEEEECCCCCEEEEECCCHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCC
PGALAREYGESEIRQGQKPNGETNPSTEEYDRLRENAFADYRLEVHGLVEKPLSFSLNEL
CHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHCCHHCCHHHH
HNMPARTQITRHDCVEGWSTIAKWTGVPLGHILALAKPKAGAHYVVFHCFDEVDTPQGPD
HCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCC
LFYGSIDLIDAQHPQTILAYGLNGSALPVANGAPLRVRVERQLGYKMSKYVKSIELVSSF
EEECCEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHCHHHHHHHHHHHHHHHH
AAIQGGRGGYWEDQGYDWYGGI
HHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGPRLSRRRFLTFTGMAGSAVLLSGCDAFDYLGSDDNAVRQVLEKANDLSYTVQHKLEG
CCCCCCCCEEEEEECCCCCEEEEECCCHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCC
PGALAREYGESEIRQGQKPNGETNPSTEEYDRLRENAFADYRLEVHGLVEKPLSFSLNEL
CHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHCCHHCCHHHH
HNMPARTQITRHDCVEGWSTIAKWTGVPLGHILALAKPKAGAHYVVFHCFDEVDTPQGPD
HCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCC
LFYGSIDLIDAQHPQTILAYGLNGSALPVANGAPLRVRVERQLGYKMSKYVKSIELVSSF
EEECCEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHCHHHHHHHHHHHHHHHH
AAIQGGRGGYWEDQGYDWYGGI
HHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: nitrite; NAD+; H2O

Specific reaction: nitrite + NAD+ + H2O = nitrate + NADH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA