| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527419
Identifier: 222527419
GI number: 222527419
Start: 5217748
End: 5218278
Strand: Direct
Name: 222527419
Synonym: Chy400_4210
Alternate gene names: NA
Gene position: 5217748-5218278 (Clockwise)
Preceding gene: 222527416
Following gene: 222527423
Centisome position: 99.03
GC content: 63.65
Gene sequence:
>531_bases ATGTCTTGCACGGCGTGCAATGGATGGTTGTTCAGAGGTGATTGCAGCCGCTACGCCCCCCTCTCTCGCGCAGCGCTATG CCTTACCCATACCCAGGTTATCAACCGCTTCGCTCATCAGTCGAACCTATCTCATTGTGCGCGATCCTGGGCACTATCGC GTTGCATCGCTGTCGCGTGGGTCTCACGTCACGAATGGGCAGCGGATGGTCGCAGTGCTAGCGGCGGTAGACGGTGTATC AGACCGTGGGGCAGGCAGGAAGCCTGCCGGCAGGGCCAGCACCTGACAGCGGTAGCGGGGATGCCGGCACGCAGGCCGGG CTGCCTGCGCCACAGGGAGCACTTGCAGCCCAGCCTAACGCAGCGCGACATGTGGGTACTGCATAGCCCAGCGGGGGCCG GGTGGGGCAAATCACACATTAGCCCTGCGCTCAGCGCACGGGCAAGTCGCGCACAATCTCTCTCCCTGGCACTGCATCTG ACCGCGAAGGTACGGAACGCCCGCGACAACCTGCTAACGAGCTGCCGGTAG
Upstream 100 bases:
>100_bases GTGCATAGAGGCGGGTTCCGTAGGGGCGGGTTGAGAACCCGCCCCTACGGACGGTATCTGTACCGTTCACCCGACCATCC ACGGGATGCGGTGAATAGGA
Downstream 100 bases:
>100_bases CAAACCCGACAGATCTGGCAAACAGAAAGCTGTACAGCATTGGTCAAGATGTTGTCTAACACACGACAACGGGACGGGTT TTGAAACCCGTCCCGTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSCTACNGWLFRGDCSRYAPLSRAALCLTHTQVINRFAHQSNLSHCARSWALSRCIAVAWVSRHEWAADGRSASGGRRCI RPWGRQEACRQGQHLTAVAGMPARRPGCLRHREHLQPSLTQRDMWVLHSPAGAGWGKSHISPALSARASRAQSLSLALHL TAKVRNARDNLLTSCR
Sequences:
>Translated_176_residues MSCTACNGWLFRGDCSRYAPLSRAALCLTHTQVINRFAHQSNLSHCARSWALSRCIAVAWVSRHEWAADGRSASGGRRCI RPWGRQEACRQGQHLTAVAGMPARRPGCLRHREHLQPSLTQRDMWVLHSPAGAGWGKSHISPALSARASRAQSLSLALHL TAKVRNARDNLLTSCR >Mature_175_residues SCTACNGWLFRGDCSRYAPLSRAALCLTHTQVINRFAHQSNLSHCARSWALSRCIAVAWVSRHEWAADGRSASGGRRCIR PWGRQEACRQGQHLTAVAGMPARRPGCLRHREHLQPSLTQRDMWVLHSPAGAGWGKSHISPALSARASRAQSLSLALHLT AKVRNARDNLLTSCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19455; Mature: 19324
Theoretical pI: Translated: 11.85; Mature: 11.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCTACNGWLFRGDCSRYAPLSRAALCLTHTQVINRFAHQSNLSHCARSWALSRCIAVAW CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSRHEWAADGRSASGGRRCIRPWGRQEACRQGQHLTAVAGMPARRPGCLRHREHLQPSLT HHHHHHCCCCCCCCCCCHHCCCCCHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCCCC QRDMWVLHSPAGAGWGKSHISPALSARASRAQSLSLALHLTAKVRNARDNLLTSCR CCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCC >Mature Secondary Structure SCTACNGWLFRGDCSRYAPLSRAALCLTHTQVINRFAHQSNLSHCARSWALSRCIAVAW CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSRHEWAADGRSASGGRRCIRPWGRQEACRQGQHLTAVAGMPARRPGCLRHREHLQPSLT HHHHHHCCCCCCCCCCCHHCCCCCHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCCCC QRDMWVLHSPAGAGWGKSHISPALSARASRAQSLSLALHLTAKVRNARDNLLTSCR CCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA