Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222527386
Identifier: 222527386
GI number: 222527386
Start: 5174117
End: 5175355
Strand: Direct
Name: 222527386
Synonym: Chy400_4176
Alternate gene names: NA
Gene position: 5174117-5175355 (Clockwise)
Preceding gene: 222527385
Following gene: 222527387
Centisome position: 98.2
GC content: 55.45
Gene sequence:
>1239_bases GTGGACACGTACACTCTCCTCAACTACGAGCGTGAAGGTGCTATCAACTTTTTCCGAGCGGGTACCAATCTCGATCCGAA CAGTCCAGGCTATGGTCTGACTGTCGATGCGTTGCATCGTCCGCAAATCGCCTCGATTGCGTCGGTAGGTTTTGCACTCA GCGCATGGGTAATCGCCGTCGAGTACGGCATGATGCCGCGCAACGAGGCGCTGAATCTGGTGCGGGGAACACTGCGCACC CTCTGGGAACGAGTACCGCATCGATACGGTTTCTTTGCCCATTTTCTTGATCGCGATACCGCAGCCCGCTGGGGTCGCTG CGAATATTCCACCATCGATACGGCCCTGTGCCTGAATGGCGCCATCACGGCAGCCGCTTATTTTCACGATGCCGAAATCA CCGAACTGACCGAACAGTTACTTGCCCGCATCGATTGGCACGCCTTTATCACCGAATGTGATCAGCAAAAGGTGCTACGA ATGTCGTACAACCCTGATGCTGATGGAGATTATGTCACAAATGAACCGGGATTCATCAGCGTTTGGGATATGGCAGCCGA GCAGAAGATGATCTATCTGCAAGCGGCGTTACACCTCGACCCAACGACCGCACGTGCTCTCTACCGTGGCTTCCGCCGCG ATAAAGGCGATTATCGCGGGCAGTCGATCATTATCAATCCCGGCGGCACATTGTTTGCGTATCAGTACACCGAAGCCTGG CTCGATGTCCGTACCTATCGCGATCCAGATGGTGTGGACTGGTTTACCAATACGCGCCTGGCTTCCATGGCCAATCGCGA CTATTGTGTGAGCCTGCACGAGCGCTTTCGCACATATCACGCGAACAGTTGGGGGATCGGTTGCGGCGATACGCCGCGCG GTTATGTGGTAGCCGGCGCACCACCGGCCCTGATTCCACCTGAACCTGATGGCACAGTATCGATTAGCAATGCAACTGCC TGTCTCCCATTCATCCCGGATGATGTGCTGGCAATGCTCGATTATCTCTATCGCGAGCACCCACAAAGCTATGGCCGATA CGGTTTCTACGACGCCTACAATCTCGACACGGTACCGGCCTGGTACAGTCACACCATCTATGGCATCAACAAGGGCTGTG CCCTCTTGATGCTGGAAAATGCCTGCACCGGATTAATCTGGGATATTTACACCAACAGCCCCATGATCCAACGCGCCCTG GCAGTGCTGGGGTTCACCCCGCAGCCATCAGCCCGCTAA
Upstream 100 bases:
>100_bases CTATATCGAACATGAAGAAACCTCACCACCGCAACGAATCCCGACAACCTTTATCGTCCGTGCCTCGTCATTGAAGCGAC CTGAATTGTTGGAGTAACTT
Downstream 100 bases:
>100_bases GACAGCAAAGGAAGTGTTATGCCTGCATTCACCGCTCACCATCAACGCTTCTGGCTCGATGATCGACCACTGTTCATTCA GGCAGGTGAATTTCACTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MDTYTLLNYEREGAINFFRAGTNLDPNSPGYGLTVDALHRPQIASIASVGFALSAWVIAVEYGMMPRNEALNLVRGTLRT LWERVPHRYGFFAHFLDRDTAARWGRCEYSTIDTALCLNGAITAAAYFHDAEITELTEQLLARIDWHAFITECDQQKVLR MSYNPDADGDYVTNEPGFISVWDMAAEQKMIYLQAALHLDPTTARALYRGFRRDKGDYRGQSIIINPGGTLFAYQYTEAW LDVRTYRDPDGVDWFTNTRLASMANRDYCVSLHERFRTYHANSWGIGCGDTPRGYVVAGAPPALIPPEPDGTVSISNATA CLPFIPDDVLAMLDYLYREHPQSYGRYGFYDAYNLDTVPAWYSHTIYGINKGCALLMLENACTGLIWDIYTNSPMIQRAL AVLGFTPQPSAR
Sequences:
>Translated_412_residues MDTYTLLNYEREGAINFFRAGTNLDPNSPGYGLTVDALHRPQIASIASVGFALSAWVIAVEYGMMPRNEALNLVRGTLRT LWERVPHRYGFFAHFLDRDTAARWGRCEYSTIDTALCLNGAITAAAYFHDAEITELTEQLLARIDWHAFITECDQQKVLR MSYNPDADGDYVTNEPGFISVWDMAAEQKMIYLQAALHLDPTTARALYRGFRRDKGDYRGQSIIINPGGTLFAYQYTEAW LDVRTYRDPDGVDWFTNTRLASMANRDYCVSLHERFRTYHANSWGIGCGDTPRGYVVAGAPPALIPPEPDGTVSISNATA CLPFIPDDVLAMLDYLYREHPQSYGRYGFYDAYNLDTVPAWYSHTIYGINKGCALLMLENACTGLIWDIYTNSPMIQRAL AVLGFTPQPSAR >Mature_412_residues MDTYTLLNYEREGAINFFRAGTNLDPNSPGYGLTVDALHRPQIASIASVGFALSAWVIAVEYGMMPRNEALNLVRGTLRT LWERVPHRYGFFAHFLDRDTAARWGRCEYSTIDTALCLNGAITAAAYFHDAEITELTEQLLARIDWHAFITECDQQKVLR MSYNPDADGDYVTNEPGFISVWDMAAEQKMIYLQAALHLDPTTARALYRGFRRDKGDYRGQSIIINPGGTLFAYQYTEAW LDVRTYRDPDGVDWFTNTRLASMANRDYCVSLHERFRTYHANSWGIGCGDTPRGYVVAGAPPALIPPEPDGTVSISNATA CLPFIPDDVLAMLDYLYREHPQSYGRYGFYDAYNLDTVPAWYSHTIYGINKGCALLMLENACTGLIWDIYTNSPMIQRAL AVLGFTPQPSAR
Specific function: Unknown
COG id: COG5368
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46419; Mature: 46419
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTYTLLNYEREGAINFFRAGTNLDPNSPGYGLTVDALHRPQIASIASVGFALSAWVIAV CCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH EYGMMPRNEALNLVRGTLRTLWERVPHRYGFFAHFLDRDTAARWGRCEYSTIDTALCLNG HHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHCC AITAAAYFHDAEITELTEQLLARIDWHAFITECDQQKVLRMSYNPDADGDYVTNEPGFIS HHEEHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCEEECCCCEEE VWDMAAEQKMIYLQAALHLDPTTARALYRGFRRDKGDYRGQSIIINPGGTLFAYQYTEAW EECCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEHHHH LDVRTYRDPDGVDWFTNTRLASMANRDYCVSLHERFRTYHANSWGIGCGDTPRGYVVAGA HEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECC PPALIPPEPDGTVSISNATACLPFIPDDVLAMLDYLYREHPQSYGRYGFYDAYNLDTVPA CCCCCCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHCCHHHCCCCCEECCCCCCCCH WYSHTIYGINKGCALLMLENACTGLIWDIYTNSPMIQRALAVLGFTPQPSAR HHCCEEEEECCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDTYTLLNYEREGAINFFRAGTNLDPNSPGYGLTVDALHRPQIASIASVGFALSAWVIAV CCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH EYGMMPRNEALNLVRGTLRTLWERVPHRYGFFAHFLDRDTAARWGRCEYSTIDTALCLNG HHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHCC AITAAAYFHDAEITELTEQLLARIDWHAFITECDQQKVLRMSYNPDADGDYVTNEPGFIS HHEEHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCEEECCCCEEE VWDMAAEQKMIYLQAALHLDPTTARALYRGFRRDKGDYRGQSIIINPGGTLFAYQYTEAW EECCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEHHHH LDVRTYRDPDGVDWFTNTRLASMANRDYCVSLHERFRTYHANSWGIGCGDTPRGYVVAGA HEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECC PPALIPPEPDGTVSISNATACLPFIPDDVLAMLDYLYREHPQSYGRYGFYDAYNLDTVPA CCCCCCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHCCHHHCCCCCEECCCCCCCCH WYSHTIYGINKGCALLMLENACTGLIWDIYTNSPMIQRALAVLGFTPQPSAR HHCCEEEEECCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA