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The map label for this gene is yfiY [H]

Identifier: 222527355

GI number: 222527355

Start: 5130524

End: 5131639

Strand: Direct

Name: yfiY [H]

Synonym: Chy400_4144

Alternate gene names: 222527355

Gene position: 5130524-5131639 (Clockwise)

Preceding gene: 222527354

Following gene: 222527359

Centisome position: 97.37

GC content: 53.58

Gene sequence:

>1116_bases
ATGACAGCGTTTCAGCGCATCTCCATGCTGATCGTATGCCTGATCCTGATCTCAGGCTGTGCTCAACAGACCGCTGGTCA
AAACCCGACCAGCACACCTGATCTGGCAACAACACCAGCTCTCACGGTCGCCACACCAACCGTTGCCTCACAAACCGATC
CCGCAGCGACGCAGTCTTGTCAGCCGGGCTTTCGCAGTTTTGATCACGAACTCCTTGCTACCGAACCACTCTGCATTCCC
GAAAATCCTGAACGGATTATCGCCCTCGACATGGCCTCCGTTGAAATGGTGTTACTGACGGAGAAGACCCTGCTGGCCAC
CAGTGGGTGGATCTTGAGCGAGCTACCCCTACTCGCACCGCAGTTTGCCGAACGGCTGACGACAGTCGAAGATGTTGGCT
ACCCTGCCAATCTGGAGAAGGTCGCCCTGTTAAAACCTGACCTTATTCTAGCCGTTGGTGGCACAACGGTAGGTGAAACG
ATTGATGTTGATCAAGCCCAACAGATTGCACCCGTAGTCTTTGCCGATCCGGTCATCTACAACGACTGGAAACTGGGTAT
GCGCTTGTGGGCCGACGTTCTCAATGCTTCTGATATGTATGAGGCAATGCTGGCTAATTATGAACAGCGTATTAGTGAGC
TACGAGCAGCGCTCGGTGATCGCATCCAACAGGAAATCTCAGTAATTGCTACCAGTACTTATGGTACTTCGCTGTGGATG
CCCGATACACCTCCCGGCGCTATACTGAGCGATGTCGGGCTGCAGCGACCACCATCACAACGGTTTGTCGGTGAAGCCGC
ACAAGCCGAATACGGCGCAGCACAATACATTATGATCTCTGATGAACGGCTCGATCTCGCCGATGGTGATGCGATCTTCT
TCTTCACCTATGCCTCAAGCAATCCTGAAACAGCAGCCGCAGAGGATGCTCACCTCAAAGCGTTTGTAGAAAAACCAATC
TGGCAGTCGCTGAACGCCGTCAAAGCCGGACAGGCGTTTCTGGTACCGGGTTACTGGTGGCGTTCGCAAACCTTCATTCT
GGCCAATCGGGTTCTTGATGATCTGTTTACCCATCTGGCCGGCACCCAGGCAACAACACCGGTTCTGATACCGTAG

Upstream 100 bases:

>100_bases
CGACAACACAGGCTGCACAACGTTGAGGGGTATGTTGATAGCTAACCGTCCGGTTAAGCGGAGTCATCACCAAATGTTTG
TGTCTACAGGAGAACCATCT

Downstream 100 bases:

>100_bases
GTACAGTGACATCTCTCAACATACCGTAAAGGGTTAAGTAATCTGCGACGAGGGCGAAAAGGCCCTCGTCGCGTGTTTTG
GGGATATGATCCTTCATCCT

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MTAFQRISMLIVCLILISGCAQQTAGQNPTSTPDLATTPALTVATPTVASQTDPAATQSCQPGFRSFDHELLATEPLCIP
ENPERIIALDMASVEMVLLTEKTLLATSGWILSELPLLAPQFAERLTTVEDVGYPANLEKVALLKPDLILAVGGTTVGET
IDVDQAQQIAPVVFADPVIYNDWKLGMRLWADVLNASDMYEAMLANYEQRISELRAALGDRIQQEISVIATSTYGTSLWM
PDTPPGAILSDVGLQRPPSQRFVGEAAQAEYGAAQYIMISDERLDLADGDAIFFFTYASSNPETAAAEDAHLKAFVEKPI
WQSLNAVKAGQAFLVPGYWWRSQTFILANRVLDDLFTHLAGTQATTPVLIP

Sequences:

>Translated_371_residues
MTAFQRISMLIVCLILISGCAQQTAGQNPTSTPDLATTPALTVATPTVASQTDPAATQSCQPGFRSFDHELLATEPLCIP
ENPERIIALDMASVEMVLLTEKTLLATSGWILSELPLLAPQFAERLTTVEDVGYPANLEKVALLKPDLILAVGGTTVGET
IDVDQAQQIAPVVFADPVIYNDWKLGMRLWADVLNASDMYEAMLANYEQRISELRAALGDRIQQEISVIATSTYGTSLWM
PDTPPGAILSDVGLQRPPSQRFVGEAAQAEYGAAQYIMISDERLDLADGDAIFFFTYASSNPETAAAEDAHLKAFVEKPI
WQSLNAVKAGQAFLVPGYWWRSQTFILANRVLDDLFTHLAGTQATTPVLIP
>Mature_370_residues
TAFQRISMLIVCLILISGCAQQTAGQNPTSTPDLATTPALTVATPTVASQTDPAATQSCQPGFRSFDHELLATEPLCIPE
NPERIIALDMASVEMVLLTEKTLLATSGWILSELPLLAPQFAERLTTVEDVGYPANLEKVALLKPDLILAVGGTTVGETI
DVDQAQQIAPVVFADPVIYNDWKLGMRLWADVLNASDMYEAMLANYEQRISELRAALGDRIQQEISVIATSTYGTSLWMP
DTPPGAILSDVGLQRPPSQRFVGEAAQAEYGAAQYIMISDERLDLADGDAIFFFTYASSNPETAAAEDAHLKAFVEKPIW
QSLNAVKAGQAFLVPGYWWRSQTFILANRVLDDLFTHLAGTQATTPVLIP

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 40247; Mature: 40116

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFQRISMLIVCLILISGCAQQTAGQNPTSTPDLATTPALTVATPTVASQTDPAATQSC
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
QPGFRSFDHELLATEPLCIPENPERIIALDMASVEMVLLTEKTLLATSGWILSELPLLAP
CCCHHHHCCHHHCCCCEECCCCCCEEEEEECCCEEEEEEECHHHHHCCCHHHHHCCHHHH
QFAERLTTVEDVGYPANLEKVALLKPDLILAVGGTTVGETIDVDQAQQIAPVVFADPVIY
HHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCCCEECCCHHHHHCCEEEECCEEE
NDWKLGMRLWADVLNASDMYEAMLANYEQRISELRAALGDRIQQEISVIATSTYGTSLWM
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEC
PDTPPGAILSDVGLQRPPSQRFVGEAAQAEYGAAQYIMISDERLDLADGDAIFFFTYASS
CCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEECC
NPETAAAEDAHLKAFVEKPIWQSLNAVKAGQAFLVPGYWWRSQTFILANRVLDDLFTHLA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEECCCHHHHHHHHHHHHHHHHC
GTQATTPVLIP
CCCCCCCCCCC
>Mature Secondary Structure 
TAFQRISMLIVCLILISGCAQQTAGQNPTSTPDLATTPALTVATPTVASQTDPAATQSC
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
QPGFRSFDHELLATEPLCIPENPERIIALDMASVEMVLLTEKTLLATSGWILSELPLLAP
CCCHHHHCCHHHCCCCEECCCCCCEEEEEECCCEEEEEEECHHHHHCCCHHHHHCCHHHH
QFAERLTTVEDVGYPANLEKVALLKPDLILAVGGTTVGETIDVDQAQQIAPVVFADPVIY
HHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCCCEECCCHHHHHCCEEEECCEEE
NDWKLGMRLWADVLNASDMYEAMLANYEQRISELRAALGDRIQQEISVIATSTYGTSLWM
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEC
PDTPPGAILSDVGLQRPPSQRFVGEAAQAEYGAAQYIMISDERLDLADGDAIFFFTYASS
CCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEECC
NPETAAAEDAHLKAFVEKPIWQSLNAVKAGQAFLVPGYWWRSQTFILANRVLDDLFTHLA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEECCCHHHHHHHHHHHHHHHHC
GTQATTPVLIP
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]