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The map label for this gene is yfiY [H]

Identifier: 222527353

GI number: 222527353

Start: 5128077

End: 5129210

Strand: Direct

Name: yfiY [H]

Synonym: Chy400_4142

Alternate gene names: 222527353

Gene position: 5128077-5129210 (Clockwise)

Preceding gene: 222527352

Following gene: 222527354

Centisome position: 97.33

GC content: 58.55

Gene sequence:

>1134_bases
ATGATTGCTACCACATCCGTCGAAACCGACATGAGCACTCTCGATGCTCTCGTTCATCATGCCCCCAACACCACAGATCT
GGGTGAACTTGCCATGTGGCTCCAGATTAACGGTGCGGCTCACCTCAGCCTCTTCGAGCGAATTGAACTGGCTGAACGAC
TGGTGACACGTCGTCGCTTCCTGATCGGTACAGGGCTGCTGGCACTGGGTGCCCTAACTGGTTGTGGATCGTGGAGTCCC
GTCAACCCGGTAACGTCAGTAGCGCCAACTGCCGCCGGCAATACCTCCCTGCAAGTAGTAGCGCTCGACGAGTTTGCCGG
GTTGTCAATTCTTGCGCTTGGTGTAAAGCCCACGAGTGTTTTTCTCACGTTTGGCTATGCCAGTGCTAAAGCGGTGTTCG
ACGCCGCCGGTGTGCAGACGGTGCTAGCCTCACGCGACGGGGGCAATCTTGAAGCACTTACCGCGCTGAAGCCGGCGACC
ATTGTGGGTGTGTCGATCCCAACGACGGTGGCAGCTCAGGAGAAGCTGGAGTTAATCGCGCCGACCACCGTGATCGAGTA
CACCGCATCATGGCAGGATCAGCTTAAGGTGACCGGTACAGCCGTCGGTCGCGCTGAGGCCGCGGCTGCCCTCATCGACC
GAATCGAGCGTGGGTTGACCACGCTTAAGACTGACCTATCCAGTGCGGGAAAGGCCGGTCAAACGATTTCGGTGATCGGA
AGCATCGCAGGCAACTCTTTCGCGCTGAGTCGGACAGGCTTGGTCGGTTCGATCCTCGAACAGGTCGGGTTGCAGCGACC
AGCAGCGCAAGACATTTCGACCGAGCCGACAAACCCATTCATCACGATCTCGGCTGAGCGTCTGAACGACCACGACGCCG
ACGTAATCTTCTTGCTGAGTGGTGGCGCCTATAACCCTGACACGCTCATTACATCAGCGCTCTGGGCGACGCTCGGCGCG
GTCAAAGCCAACCGGGTTGTCAACGTAGTCGCCGAGTTGTGGCTCTCGTCCAACGCATTCAGTGTCGACTGGATCGTGCA
GGATGTGCGTGCAGCGCTGCTGGGCGATGGGACGGTTGCAACCGAGTCTGATATAGTGAACCGCTGGCAGACATTTGTCG
CGACCCAGCAGTGA

Upstream 100 bases:

>100_bases
ACGGGATCGCCGTACCAGCCTCTGCCAATGATCGTTGCGCCTTACGTCCGATTGACGCAGAGGAGTTCTGTTTGTATGAC
CCGGAAAGGTAAGGAATAAA

Downstream 100 bases:

>100_bases
GCGAAAGCCGATGCGTAGCGGAACAATGATCGTTCTCTCCAACACTGGAGAGATCTCGTCAAGCACCTGGTTACAAGTCA
ATAACACGTGCCAACGACAA

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MIATTSVETDMSTLDALVHHAPNTTDLGELAMWLQINGAAHLSLFERIELAERLVTRRRFLIGTGLLALGALTGCGSWSP
VNPVTSVAPTAAGNTSLQVVALDEFAGLSILALGVKPTSVFLTFGYASAKAVFDAAGVQTVLASRDGGNLEALTALKPAT
IVGVSIPTTVAAQEKLELIAPTTVIEYTASWQDQLKVTGTAVGRAEAAAALIDRIERGLTTLKTDLSSAGKAGQTISVIG
SIAGNSFALSRTGLVGSILEQVGLQRPAAQDISTEPTNPFITISAERLNDHDADVIFLLSGGAYNPDTLITSALWATLGA
VKANRVVNVVAELWLSSNAFSVDWIVQDVRAALLGDGTVATESDIVNRWQTFVATQQ

Sequences:

>Translated_377_residues
MIATTSVETDMSTLDALVHHAPNTTDLGELAMWLQINGAAHLSLFERIELAERLVTRRRFLIGTGLLALGALTGCGSWSP
VNPVTSVAPTAAGNTSLQVVALDEFAGLSILALGVKPTSVFLTFGYASAKAVFDAAGVQTVLASRDGGNLEALTALKPAT
IVGVSIPTTVAAQEKLELIAPTTVIEYTASWQDQLKVTGTAVGRAEAAAALIDRIERGLTTLKTDLSSAGKAGQTISVIG
SIAGNSFALSRTGLVGSILEQVGLQRPAAQDISTEPTNPFITISAERLNDHDADVIFLLSGGAYNPDTLITSALWATLGA
VKANRVVNVVAELWLSSNAFSVDWIVQDVRAALLGDGTVATESDIVNRWQTFVATQQ
>Mature_377_residues
MIATTSVETDMSTLDALVHHAPNTTDLGELAMWLQINGAAHLSLFERIELAERLVTRRRFLIGTGLLALGALTGCGSWSP
VNPVTSVAPTAAGNTSLQVVALDEFAGLSILALGVKPTSVFLTFGYASAKAVFDAAGVQTVLASRDGGNLEALTALKPAT
IVGVSIPTTVAAQEKLELIAPTTVIEYTASWQDQLKVTGTAVGRAEAAAALIDRIERGLTTLKTDLSSAGKAGQTISVIG
SIAGNSFALSRTGLVGSILEQVGLQRPAAQDISTEPTNPFITISAERLNDHDADVIFLLSGGAYNPDTLITSALWATLGA
VKANRVVNVVAELWLSSNAFSVDWIVQDVRAALLGDGTVATESDIVNRWQTFVATQQ

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 39365; Mature: 39365

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATTSVETDMSTLDALVHHAPNTTDLGELAMWLQINGAAHLSLFERIELAERLVTRRRF
CCCCCCCCHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
LIGTGLLALGALTGCGSWSPVNPVTSVAPTAAGNTSLQVVALDEFAGLSILALGVKPTSV
HHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEE
FLTFGYASAKAVFDAAGVQTVLASRDGGNLEALTALKPATIVGVSIPTTVAAQEKLELIA
EEEECCCHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHCC
PTTVIEYTASWQDQLKVTGTAVGRAEAAAALIDRIERGLTTLKTDLSSAGKAGQTISVIG
CCEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
SIAGNSFALSRTGLVGSILEQVGLQRPAAQDISTEPTNPFITISAERLNDHDADVIFLLS
HHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCEEEEEE
GGAYNPDTLITSALWATLGAVKANRVVNVVAELWLSSNAFSVDWIVQDVRAALLGDGTVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC
TESDIVNRWQTFVATQQ
CHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIATTSVETDMSTLDALVHHAPNTTDLGELAMWLQINGAAHLSLFERIELAERLVTRRRF
CCCCCCCCHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
LIGTGLLALGALTGCGSWSPVNPVTSVAPTAAGNTSLQVVALDEFAGLSILALGVKPTSV
HHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEE
FLTFGYASAKAVFDAAGVQTVLASRDGGNLEALTALKPATIVGVSIPTTVAAQEKLELIA
EEEECCCHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHCC
PTTVIEYTASWQDQLKVTGTAVGRAEAAAALIDRIERGLTTLKTDLSSAGKAGQTISVIG
CCEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
SIAGNSFALSRTGLVGSILEQVGLQRPAAQDISTEPTNPFITISAERLNDHDADVIFLLS
HHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCEEEEEE
GGAYNPDTLITSALWATLGAVKANRVVNVVAELWLSSNAFSVDWIVQDVRAALLGDGTVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC
TESDIVNRWQTFVATQQ
CHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]