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The map label for this gene is 222527345

Identifier: 222527345

GI number: 222527345

Start: 5118140

End: 5118811

Strand: Reverse

Name: 222527345

Synonym: Chy400_4133

Alternate gene names: NA

Gene position: 5118811-5118140 (Counterclockwise)

Preceding gene: 222527346

Following gene: 222527344

Centisome position: 97.15

GC content: 54.46

Gene sequence:

>672_bases
GTGCGCGATTTTACCTCGATTGATGATATTTTCAGCCGCCCGCGCGACGAAAACATCGAGCTGCTCAAGATGTGGGCAGG
GACGACGCTGGCTTTTGCGATTGTGCAAACTGGCGCATCAAATCTGCTGAGTAGCACGTTCTTTGTGAACCTGGTCGTGG
CGGCAGTGGTGGCCGGAGTGGCCTTCGTCCTGCACGAGCTGGCGCATAGAGTGGTGGCCCGTAGCTACGGCGCAGAGGCT
CATTTCATTGCGAATGATCGATGGTTGCTCTTGTCTATCGCGATCAGTTTTTTTGGCCTCTTTATTGCAGCACCGGGCGC
TGTCTGGCACCGTGGTCTGTTGACGATGCGCCAGAGCGGGATCATTGCGCTGGCCGGCCCGGTGACCAACCTGGTGTTGT
CGGTGTTGTTTCTCTTGCTGCTCTTTCCGGTTGTGATCTTGCAACCACCATTTGTTGATCTGCTGGTGACGATCTGCTAT
GTCGGATTTCGCTTCAACGCCTGGATTGGTCTGTTCAATATGATCCCGGCTGGCCCGTTTGATGGGGCGAAGGTGCTGGC
CTGGGACTGGCGGGTATTTGCGGTGACGACAGCCGTTGGGGTTGGTTTGAGTTTTCTGCTTAGCGATGATCTGTTGTTTA
CATTAATACAAACCTTCGTTCGCCTGTTGTAA

Upstream 100 bases:

>100_bases
CCGACAACGGTGCCTGCGCAAGGGTAAGTCTCTCCAGAGTATTGCCAAAGCGGGTATAATACAGGAGAGCTGTATCTAAT
GAACCACTGTGGGAGATGCC

Downstream 100 bases:

>100_bases
ATAGCTGCTGAGGTTTTCATGCGTATTCCATTAATCGCCGGCAACTGGAAGATGTACAAGACGGTTGGCGAAGCAACGAC
GCTGGTGCGCGATTTGCTGG

Product: peptidase M50

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MRDFTSIDDIFSRPRDENIELLKMWAGTTLAFAIVQTGASNLLSSTFFVNLVVAAVVAGVAFVLHELAHRVVARSYGAEA
HFIANDRWLLLSIAISFFGLFIAAPGAVWHRGLLTMRQSGIIALAGPVTNLVLSVLFLLLLFPVVILQPPFVDLLVTICY
VGFRFNAWIGLFNMIPAGPFDGAKVLAWDWRVFAVTTAVGVGLSFLLSDDLLFTLIQTFVRLL

Sequences:

>Translated_223_residues
MRDFTSIDDIFSRPRDENIELLKMWAGTTLAFAIVQTGASNLLSSTFFVNLVVAAVVAGVAFVLHELAHRVVARSYGAEA
HFIANDRWLLLSIAISFFGLFIAAPGAVWHRGLLTMRQSGIIALAGPVTNLVLSVLFLLLLFPVVILQPPFVDLLVTICY
VGFRFNAWIGLFNMIPAGPFDGAKVLAWDWRVFAVTTAVGVGLSFLLSDDLLFTLIQTFVRLL
>Mature_223_residues
MRDFTSIDDIFSRPRDENIELLKMWAGTTLAFAIVQTGASNLLSSTFFVNLVVAAVVAGVAFVLHELAHRVVARSYGAEA
HFIANDRWLLLSIAISFFGLFIAAPGAVWHRGLLTMRQSGIIALAGPVTNLVLSVLFLLLLFPVVILQPPFVDLLVTICY
VGFRFNAWIGLFNMIPAGPFDGAKVLAWDWRVFAVTTAVGVGLSFLLSDDLLFTLIQTFVRLL

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 24486; Mature: 24486

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDFTSIDDIFSRPRDENIELLKMWAGTTLAFAIVQTGASNLLSSTFFVNLVVAAVVAGV
CCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFVLHELAHRVVARSYGAEAHFIANDRWLLLSIAISFFGLFIAAPGAVWHRGLLTMRQSG
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
IIALAGPVTNLVLSVLFLLLLFPVVILQPPFVDLLVTICYVGFRFNAWIGLFNMIPAGPF
EEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DGAKVLAWDWRVFAVTTAVGVGLSFLLSDDLLFTLIQTFVRLL
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRDFTSIDDIFSRPRDENIELLKMWAGTTLAFAIVQTGASNLLSSTFFVNLVVAAVVAGV
CCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFVLHELAHRVVARSYGAEAHFIANDRWLLLSIAISFFGLFIAAPGAVWHRGLLTMRQSG
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
IIALAGPVTNLVLSVLFLLLLFPVVILQPPFVDLLVTICYVGFRFNAWIGLFNMIPAGPF
EEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DGAKVLAWDWRVFAVTTAVGVGLSFLLSDDLLFTLIQTFVRLL
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]