Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222527328

Identifier: 222527328

GI number: 222527328

Start: 5095972

End: 5097141

Strand: Reverse

Name: 222527328

Synonym: Chy400_4114

Alternate gene names: NA

Gene position: 5097141-5095972 (Counterclockwise)

Preceding gene: 222527329

Following gene: 222527327

Centisome position: 96.74

GC content: 56.75

Gene sequence:

>1170_bases
ATGAGCGTTATATCTTCCCCGGCCTACAAGCGTGCCCTTCAGTTCATTACCCTCATGGGTGTCGTGAGTCTGCTGGCCGA
TATGGTCTACGAGGGTGGCCGAAGTCTGAGTGGTCAGTATCTGGCCTTGCTCGGTGCCAGTGGTGCGGTTGTGGGGTTGA
CGGCAGGGATTGGCGAGCTGATCGGCTATGGGTTGCGTCTGGTCTTCGGTTATCTCAGCGACCGCACCCGGCGCTACTGG
TTGCTGACTATTCTTGGCTATAGTTTGACGGTTATTGCAGTCCCGTTGCTCGCTTTAGCCAATGCGTGGCCTTTGGCTGT
TGGTCTGTTGATGGTTGAGCGTTTGAGCAAAGCGTTACGCAGTCCGGCGAAAGATACCCTGATCTCATACGCTGCTGATC
GAGTAGGTGCAGGTAAAGGCTTTGGGCTGCACGAAGTGCTGGATCAGATTGGTGCAGTGCTGGCGCCGCTGCTGCTGGCC
GGAATCCTGGCATTCAGTGGGAACTTTCAACTGGCGTTTGGGGTATTGATTATTCCTGGCCTGCTCTGCATGATGGTCTT
GTTGATGGCACGGATGCGCTTTCCACAGCCTGCCGATTTAGCGCGACAAACCCCGGCAATAACCACAACCGGCTTTTCGC
GTCAGTTCTGGTATTACTTGGCCGGCGTTGCCCTCTTTGCGGCGGCCAGTGTTGATTTTGCCCTGGCTGCCTACCATCTA
CAGCGCCTGCAAATCGTTCAGCCGGCGGGTATTCCTGCATTGTACGCGCTGGCGATGACGGTTGATGCTGTTGCTGCGTT
CGGCTTTGGCTTGCTCTACGACCGGATTGGCCTTGGCGCATTGGTTGGGGTAACCGCTCTGGGAGCTTTGAGCACCCCAC
TTCTCTTCAGTACCGGTCTGCTTACCGTTATCATCGGTGTTGTCCTTTGGGGGGCAGTGTTAGGAGCGCAAGAGTCAATC
TTGCGCGCTGCGGTAGGCCAATTGGCACCACCTGATCGGCGAGGTGCGGCGTATGGCCTGTTTCACGCCGGTTTTGGTGT
GAGCTGGTTTGTCGGCAGCGCTTGTCTTGGTTTGTTGTATGATAGAGCACTACCGGCGCTGATTGGTGTCTCGGCGGCGC
TCTACCTGGGTGCGGCGCTGGTGTTGTTCTACGTTGCCCGTCGGCAATGA

Upstream 100 bases:

>100_bases
GGAAGACGTTAATAGACGTTAATATCTGTTGCGTTTTTACCTGCTGGTCACATCTTTCTGTCCAGGTCATTGGTACAGGA
CATGCGTCGAGAGGTTTGCC

Downstream 100 bases:

>100_bases
TGTCGACGATTCGCTACATGGATATTGATAGTTGACCTCGACAGTCGCAGGATGCGATCCCTCCGCCCCGCTGCGCGAGG
GATTGCCATTTCGGCAATGA

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSVISSPAYKRALQFITLMGVVSLLADMVYEGGRSLSGQYLALLGASGAVVGLTAGIGELIGYGLRLVFGYLSDRTRRYW
LLTILGYSLTVIAVPLLALANAWPLAVGLLMVERLSKALRSPAKDTLISYAADRVGAGKGFGLHEVLDQIGAVLAPLLLA
GILAFSGNFQLAFGVLIIPGLLCMMVLLMARMRFPQPADLARQTPAITTTGFSRQFWYYLAGVALFAAASVDFALAAYHL
QRLQIVQPAGIPALYALAMTVDAVAAFGFGLLYDRIGLGALVGVTALGALSTPLLFSTGLLTVIIGVVLWGAVLGAQESI
LRAAVGQLAPPDRRGAAYGLFHAGFGVSWFVGSACLGLLYDRALPALIGVSAALYLGAALVLFYVARRQ

Sequences:

>Translated_389_residues
MSVISSPAYKRALQFITLMGVVSLLADMVYEGGRSLSGQYLALLGASGAVVGLTAGIGELIGYGLRLVFGYLSDRTRRYW
LLTILGYSLTVIAVPLLALANAWPLAVGLLMVERLSKALRSPAKDTLISYAADRVGAGKGFGLHEVLDQIGAVLAPLLLA
GILAFSGNFQLAFGVLIIPGLLCMMVLLMARMRFPQPADLARQTPAITTTGFSRQFWYYLAGVALFAAASVDFALAAYHL
QRLQIVQPAGIPALYALAMTVDAVAAFGFGLLYDRIGLGALVGVTALGALSTPLLFSTGLLTVIIGVVLWGAVLGAQESI
LRAAVGQLAPPDRRGAAYGLFHAGFGVSWFVGSACLGLLYDRALPALIGVSAALYLGAALVLFYVARRQ
>Mature_388_residues
SVISSPAYKRALQFITLMGVVSLLADMVYEGGRSLSGQYLALLGASGAVVGLTAGIGELIGYGLRLVFGYLSDRTRRYWL
LTILGYSLTVIAVPLLALANAWPLAVGLLMVERLSKALRSPAKDTLISYAADRVGAGKGFGLHEVLDQIGAVLAPLLLAG
ILAFSGNFQLAFGVLIIPGLLCMMVLLMARMRFPQPADLARQTPAITTTGFSRQFWYYLAGVALFAAASVDFALAAYHLQ
RLQIVQPAGIPALYALAMTVDAVAAFGFGLLYDRIGLGALVGVTALGALSTPLLFSTGLLTVIIGVVLWGAVLGAQESIL
RAAVGQLAPPDRRGAAYGLFHAGFGVSWFVGSACLGLLYDRALPALIGVSAALYLGAALVLFYVARRQ

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40859; Mature: 40728

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVISSPAYKRALQFITLMGVVSLLADMVYEGGRSLSGQYLALLGASGAVVGLTAGIGEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHHHHH
IGYGLRLVFGYLSDRTRRYWLLTILGYSLTVIAVPLLALANAWPLAVGLLMVERLSKALR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
SPAKDTLISYAADRVGAGKGFGLHEVLDQIGAVLAPLLLAGILAFSGNFQLAFGVLIIPG
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LLCMMVLLMARMRFPQPADLARQTPAITTTGFSRQFWYYLAGVALFAAASVDFALAAYHL
HHHHHHHHHHHCCCCCCHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRLQIVQPAGIPALYALAMTVDAVAAFGFGLLYDRIGLGALVGVTALGALSTPLLFSTGL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTVIIGVVLWGAVLGAQESILRAAVGQLAPPDRRGAAYGLFHAGFGVSWFVGSACLGLLY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHH
DRALPALIGVSAALYLGAALVLFYVARRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVISSPAYKRALQFITLMGVVSLLADMVYEGGRSLSGQYLALLGASGAVVGLTAGIGEL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]