Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
---|---|
Accession | NC_012032 |
Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222527322
Identifier: 222527322
GI number: 222527322
Start: 5085210
End: 5085893
Strand: Reverse
Name: 222527322
Synonym: Chy400_4107
Alternate gene names: NA
Gene position: 5085893-5085210 (Counterclockwise)
Preceding gene: 222527326
Following gene: 222527317
Centisome position: 96.53
GC content: 62.87
Gene sequence:
>684_bases ATGCAGGATAAAGATAGCGGCGGGTTGGCGCGCCAGCGGGTTAAAACCTTGCCTCAATCTGTGGAAGCCCCTCCGGGGTT GGCCTGGCGGCGGGGAGGGGGTATCGGGCGGCGAATTGGAAGGGGGCGAGTTAGTGTGGATCGGCGGGTAAAACCCTGCC TCAATGCATTAAAGCCCCTGCGGGGCTGCCTGACGGCGGGGAGGGGTGACGGTCGTGCCATGATGTGCTGGATGGATTGC CTTACCCGCTCGTTGTGCGCGTGTCGCGACGTTTGGATTGCGGCAGCGCAGCCGTGCTCACGATCCGGCGCGTGGCACGC CGTTGGCCATCCTGGTCACGGGGATGCAAAAGGAGTATGCGACACGCCCCCACCCTCACCCGCCCCCAGCTATGCATTAC CTACAACTGGTGTCAACCACGTGCGTATCAGCGAGTATGATCGCTATGGGTGCTGTTGTGGGCGACTGGCCCGGTGGCAG TGCGCCGCTCCAGCCGTGCTATCACATGCCGGATGGGTTGCCTTACGCACGCATCATGTGCGTGTCGCGCGGTATGGAGT GCGGCAGCCATGCTGCCGCAGCAGCCGTGCTCACGATCCGGCGCGTGGTACGCCGTCGACCACCCTGGTCACGGGGATGT TTTGTGTACTCGTCACGATCATAGGGTCTGTCAGGAATGAATGA
Upstream 100 bases:
>100_bases ACTCCTCTGCCTGGACACAGCCACTTTGCTGGGTTCCAGGATGATGATACGGGGAAACGGACAGTTGGTATTATACAACA AAATTCTTGCGTAATAAGTC
Downstream 100 bases:
>100_bases GAGAACTTCTTGTAAATGTTTTTGAAATAGGTTCTACTCTTCATCAGGCCACGGATCGGCGCTGAACTGATCGTGTACCT CTTGCAATTGCACGTCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MQDKDSGGLARQRVKTLPQSVEAPPGLAWRRGGGIGRRIGRGRVSVDRRVKPCLNALKPLRGCLTAGRGDGRAMMCWMDC LTRSLCACRDVWIAAAQPCSRSGAWHAVGHPGHGDAKGVCDTPPPSPAPSYALPTTGVNHVRISEYDRYGCCCGRLARWQ CAAPAVLSHAGWVALRTHHVRVARYGVRQPCCRSSRAHDPARGTPSTTLVTGMFCVLVTIIGSVRNE
Sequences:
>Translated_227_residues MQDKDSGGLARQRVKTLPQSVEAPPGLAWRRGGGIGRRIGRGRVSVDRRVKPCLNALKPLRGCLTAGRGDGRAMMCWMDC LTRSLCACRDVWIAAAQPCSRSGAWHAVGHPGHGDAKGVCDTPPPSPAPSYALPTTGVNHVRISEYDRYGCCCGRLARWQ CAAPAVLSHAGWVALRTHHVRVARYGVRQPCCRSSRAHDPARGTPSTTLVTGMFCVLVTIIGSVRNE >Mature_227_residues MQDKDSGGLARQRVKTLPQSVEAPPGLAWRRGGGIGRRIGRGRVSVDRRVKPCLNALKPLRGCLTAGRGDGRAMMCWMDC LTRSLCACRDVWIAAAQPCSRSGAWHAVGHPGHGDAKGVCDTPPPSPAPSYALPTTGVNHVRISEYDRYGCCCGRLARWQ CAAPAVLSHAGWVALRTHHVRVARYGVRQPCCRSSRAHDPARGTPSTTLVTGMFCVLVTIIGSVRNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24432; Mature: 24432
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 6.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDKDSGGLARQRVKTLPQSVEAPPGLAWRRGGGIGRRIGRGRVSVDRRVKPCLNALKPL CCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHH RGCLTAGRGDGRAMMCWMDCLTRSLCACRDVWIAAAQPCSRSGAWHAVGHPGHGDAKGVC HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC DTPPPSPAPSYALPTTGVNHVRISEYDRYGCCCGRLARWQCAAPAVLSHAGWVALRTHHV CCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHCCEEEHHHHHH RVARYGVRQPCCRSSRAHDPARGTPSTTLVTGMFCVLVTIIGSVRNE HHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQDKDSGGLARQRVKTLPQSVEAPPGLAWRRGGGIGRRIGRGRVSVDRRVKPCLNALKPL CCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHH RGCLTAGRGDGRAMMCWMDCLTRSLCACRDVWIAAAQPCSRSGAWHAVGHPGHGDAKGVC HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC DTPPPSPAPSYALPTTGVNHVRISEYDRYGCCCGRLARWQCAAPAVLSHAGWVALRTHHV CCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHCCEEEHHHHHH RVARYGVRQPCCRSSRAHDPARGTPSTTLVTGMFCVLVTIIGSVRNE HHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA