| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527285
Identifier: 222527285
GI number: 222527285
Start: 5032054
End: 5032560
Strand: Reverse
Name: 222527285
Synonym: Chy400_4070
Alternate gene names: NA
Gene position: 5032560-5032054 (Counterclockwise)
Preceding gene: 222527310
Following gene: 222527283
Centisome position: 95.51
GC content: 63.71
Gene sequence:
>507_bases ATGTCGTGGCGTCCCCTGCGGGGCTGTCCTGACAGCTTTTCATTACCCACATGTCACGCTGCGTTAGTCCGGGCTGCAAG CGCTCCCCGTAGCGCAGGTAGCGTGGCGCAGGCTTCCAGCCTGCGTGCAGGCATCCCCACCATCGCCGGCAGGTGCTGGC CGTGGCCGCTGGTGCGCAGGCACGAACCTATTGCAACAACACGTCTACGCGCAGGTATCGCATGCAAGCCTGACCGACTC GATGATCGGCACGAGCACGTTCAGCACTCCCGTGACCATGATGGGGAACGGTATACCACGCGCCGGATCGTGAGCGTAGC TGGTGCGGCAGCCATGCTGCTGCACTCCAAACCACGCGACACGCGCATAACGAGCGGGTACAGCAATCCTTCCAGCACGC GCCGGCACGGCTGGAGCGGCGCTCTGCCACCGGGCCAGTCGCTCAAACCAGCACCCCTAGCGATCATCCCCGCTGATACG CACGTGGTTGACACCAGTTATGGGTAA
Upstream 100 bases:
>100_bases TCACTTCTGTGGAGAAATCACGCCATGGCCTGGAACTCGTTCACACTCAGCAAGAGGCGATTATGTAGCGCCAAACCGCA GTCCTGGTGGTTTGGCGTGA
Downstream 100 bases:
>100_bases TACATAGGTCCTGACAGCGGGGGGCTTGCATACTGATGCATCATAGCCCCTGAGTGGCTTGCAGGTGGTTAGAGAGGGCT GTAGTCCGCATAAAGCAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSWRPLRGCPDSFSLPTCHAALVRAASAPRSAGSVAQASSLRAGIPTIAGRCWPWPLVRRHEPIATTRLRAGIACKPDRL DDRHEHVQHSRDHDGERYTTRRIVSVAGAAAMLLHSKPRDTRITSGYSNPSSTRRHGWSGALPPGQSLKPAPLAIIPADT HVVDTSYG
Sequences:
>Translated_168_residues MSWRPLRGCPDSFSLPTCHAALVRAASAPRSAGSVAQASSLRAGIPTIAGRCWPWPLVRRHEPIATTRLRAGIACKPDRL DDRHEHVQHSRDHDGERYTTRRIVSVAGAAAMLLHSKPRDTRITSGYSNPSSTRRHGWSGALPPGQSLKPAPLAIIPADT HVVDTSYG >Mature_167_residues SWRPLRGCPDSFSLPTCHAALVRAASAPRSAGSVAQASSLRAGIPTIAGRCWPWPLVRRHEPIATTRLRAGIACKPDRLD DRHEHVQHSRDHDGERYTTRRIVSVAGAAAMLLHSKPRDTRITSGYSNPSSTRRHGWSGALPPGQSLKPAPLAIIPADTH VVDTSYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18206; Mature: 18075
Theoretical pI: Translated: 11.23; Mature: 11.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWRPLRGCPDSFSLPTCHAALVRAASAPRSAGSVAQASSLRAGIPTIAGRCWPWPLVRR CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHCCCCCCCHHHHC HEPIATTRLRAGIACKPDRLDDRHEHVQHSRDHDGERYTTRRIVSVAGAAAMLLHSKPRD CCCCHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC TRITSGYSNPSSTRRHGWSGALPPGQSLKPAPLAIIPADTHVVDTSYG CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCC >Mature Secondary Structure SWRPLRGCPDSFSLPTCHAALVRAASAPRSAGSVAQASSLRAGIPTIAGRCWPWPLVRR CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHCCCCCCCHHHHC HEPIATTRLRAGIACKPDRLDDRHEHVQHSRDHDGERYTTRRIVSVAGAAAMLLHSKPRD CCCCHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC TRITSGYSNPSSTRRHGWSGALPPGQSLKPAPLAIIPADTHVVDTSYG CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA