| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527283
Identifier: 222527283
GI number: 222527283
Start: 5029199
End: 5030698
Strand: Reverse
Name: 222527283
Synonym: Chy400_4068
Alternate gene names: NA
Gene position: 5030698-5029199 (Counterclockwise)
Preceding gene: 222527285
Following gene: 222527267
Centisome position: 95.48
GC content: 44.4
Gene sequence:
>1500_bases ATGAGGTGGTTCATCAATGCCCAAAAGATGGTGGTTTTTCTCCTGTTGCTTGGGTCTGGATTTTTAGCCGTCTATAACTT AGATGGTTATCCTGATTTCATGGCATTAGACGAAGGTTTTCGGCTCTATTTTGCGAGAAATGTGACTGAACATGGAAAAT GGGCTATTCTGACCCAAGATGGGTATCAGGAATATTGGCGTGATTCAACAGGTTTGCTTGTTCTCGGTTCTGTTATTGCT GCATTTAAGCTGTTTGGCCCCTCGTTATGGCTCGCTCGTTTGCTGGTTAGTGTGTTTTTGATCGCTGGTGTCGTTACTGT TTACCTTGTCGTTCATAACTGGTATGGTCAGCAGGCTGCCATACTCGCTGTTGCGTTATTTCTGTTCTTCGGTCCGCCAT GGCTTAATAGTGTGACAATGGGGCGCTGTGTATACGGCGAAGTTCCCGCGTTGGTTCTCTTCATTACAGGATGCTGGCTA TGGTCACGTGCCGTAATTCAACCATCACGTTTTTTGCCGGCGGCCAGTCTGACATTTGCGCTCGCCGTGCTGGCTAAGGA CCTCTTCGCACCGGTCATTATTGCCGCAATTGTCATCACATCTGTCTATCAGCGTTGGCGTGGGGTGATCGTCCCTCGCT TATGTGTCATATTGCCAATGGTGGCATGCCTGGTTGCATTCACTGGTTGGTCGTTGTTTCAATACATTATGAGCCTATTG AGTGGCTTTGGTCATCAACATAACCTTGTGCATTTGTCGTTGAGCCGGGTTATGATTGTTTCTCCACTGCTTTGGTTTCA AAATGCGAAATTTCTTTATGATAATGGGGTGCTATTTGTTATTCCATCTGTGTTGTATGTGTTATTTATTCGCAAGACTA ACATTGATTCAGGTTTTCTGGTTTTGTCTTTCTTCCTGGTAGTCTGGTCAATCTGGTATATCGGTTTCTCAATTGGCTGG CCACGCTATGCGTATCCGATTTGGGCTGTTGGCGGTATCATGCTGGCAATACTGTTAGATGATATTCGGGTTATGATGCA CCGGTATATCACGGAGGAGCCAAAGCGTTTATTAGCACAATTGGCCTACCCGATATTTATAGGTTTGTCTTGTGTCATTA TTGTCCTGTGGCCAGCCCAGAATACTGTTCGTCGTCTTTTTGCAGAAGCGAATGATGATGCGCAAATGATGGCAATGTAT ATCGACAGGTATATACCTGCTGATGCTCGTATTGTATCTGGGCAATGGGACATATGGTTCTATAGTTCAAGAACCTATAT TCCTATTCCCGCCGAATATTATGAATCAAAGATCGCTAAGCAGGTCGGTAAACATGTTGCTATATCGCATTTTACCGATA TGAATGATCTGCGAGCTGAATACATCATTGATGGTCACGAAAATCAGGTTGTTGAAATGGTGCCATTTTCTTCACTCCAG GATGATTATGAATTGGTGTATCAGAATGCCTCATACCGGTTGTATCGATTGAAGCCTTGA
Upstream 100 bases:
>100_bases TCAGGAGACGATTCTGCCGATTCCCTCGCAATCATGCTGACTTTCTCATACGTGCCTCCACTGGCGAATGTTGAACCTCT GAAGTTCATGAGGAGCGCAT
Downstream 100 bases:
>100_bases TGGCGTTGTTTTATCACCTCCCCTTGACTCGATAAATCGATACCGTTGCATTCTCGTACACCGGCTCTAACGTATCAGCG CTTTGCCTGGTCAGCTCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MRWFINAQKMVVFLLLLGSGFLAVYNLDGYPDFMALDEGFRLYFARNVTEHGKWAILTQDGYQEYWRDSTGLLVLGSVIA AFKLFGPSLWLARLLVSVFLIAGVVTVYLVVHNWYGQQAAILAVALFLFFGPPWLNSVTMGRCVYGEVPALVLFITGCWL WSRAVIQPSRFLPAASLTFALAVLAKDLFAPVIIAAIVITSVYQRWRGVIVPRLCVILPMVACLVAFTGWSLFQYIMSLL SGFGHQHNLVHLSLSRVMIVSPLLWFQNAKFLYDNGVLFVIPSVLYVLFIRKTNIDSGFLVLSFFLVVWSIWYIGFSIGW PRYAYPIWAVGGIMLAILLDDIRVMMHRYITEEPKRLLAQLAYPIFIGLSCVIIVLWPAQNTVRRLFAEANDDAQMMAMY IDRYIPADARIVSGQWDIWFYSSRTYIPIPAEYYESKIAKQVGKHVAISHFTDMNDLRAEYIIDGHENQVVEMVPFSSLQ DDYELVYQNASYRLYRLKP
Sequences:
>Translated_499_residues MRWFINAQKMVVFLLLLGSGFLAVYNLDGYPDFMALDEGFRLYFARNVTEHGKWAILTQDGYQEYWRDSTGLLVLGSVIA AFKLFGPSLWLARLLVSVFLIAGVVTVYLVVHNWYGQQAAILAVALFLFFGPPWLNSVTMGRCVYGEVPALVLFITGCWL WSRAVIQPSRFLPAASLTFALAVLAKDLFAPVIIAAIVITSVYQRWRGVIVPRLCVILPMVACLVAFTGWSLFQYIMSLL SGFGHQHNLVHLSLSRVMIVSPLLWFQNAKFLYDNGVLFVIPSVLYVLFIRKTNIDSGFLVLSFFLVVWSIWYIGFSIGW PRYAYPIWAVGGIMLAILLDDIRVMMHRYITEEPKRLLAQLAYPIFIGLSCVIIVLWPAQNTVRRLFAEANDDAQMMAMY IDRYIPADARIVSGQWDIWFYSSRTYIPIPAEYYESKIAKQVGKHVAISHFTDMNDLRAEYIIDGHENQVVEMVPFSSLQ DDYELVYQNASYRLYRLKP >Mature_499_residues MRWFINAQKMVVFLLLLGSGFLAVYNLDGYPDFMALDEGFRLYFARNVTEHGKWAILTQDGYQEYWRDSTGLLVLGSVIA AFKLFGPSLWLARLLVSVFLIAGVVTVYLVVHNWYGQQAAILAVALFLFFGPPWLNSVTMGRCVYGEVPALVLFITGCWL WSRAVIQPSRFLPAASLTFALAVLAKDLFAPVIIAAIVITSVYQRWRGVIVPRLCVILPMVACLVAFTGWSLFQYIMSLL SGFGHQHNLVHLSLSRVMIVSPLLWFQNAKFLYDNGVLFVIPSVLYVLFIRKTNIDSGFLVLSFFLVVWSIWYIGFSIGW PRYAYPIWAVGGIMLAILLDDIRVMMHRYITEEPKRLLAQLAYPIFIGLSCVIIVLWPAQNTVRRLFAEANDDAQMMAMY IDRYIPADARIVSGQWDIWFYSSRTYIPIPAEYYESKIAKQVGKHVAISHFTDMNDLRAEYIIDGHENQVVEMVPFSSLQ DDYELVYQNASYRLYRLKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57053; Mature: 57053
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWFINAQKMVVFLLLLGSGFLAVYNLDGYPDFMALDEGFRLYFARNVTEHGKWAILTQD CCEEECHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCEEEEEECCCCCCCEEEEECC GYQEYWRDSTGLLVLGSVIAAFKLFGPSLWLARLLVSVFLIAGVVTVYLVVHNWYGQQAA CHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ILAVALFLFFGPPWLNSVTMGRCVYGEVPALVLFITGCWLWSRAVIQPSRFLPAASLTFA HHHHHHHHHHCCCCCCCHHCCCEECCCHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHH LAVLAKDLFAPVIIAAIVITSVYQRWRGVIVPRLCVILPMVACLVAFTGWSLFQYIMSLL HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGFGHQHNLVHLSLSRVMIVSPLLWFQNAKFLYDNGVLFVIPSVLYVLFIRKTNIDSGFL HCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHH VLSFFLVVWSIWYIGFSIGWPRYAYPIWAVGGIMLAILLDDIRVMMHRYITEEPKRLLAQ HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAYPIFIGLSCVIIVLWPAQNTVRRLFAEANDDAQMMAMYIDRYIPADARIVSGQWDIWF HHHHHHHHHHHHEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCEEEEE YSSRTYIPIPAEYYESKIAKQVGKHVAISHFTDMNDLRAEYIIDGHENQVVEMVPFSSLQ ECCEEEECCCHHHHHHHHHHHHCCCEEHHHCCCHHHCCHHHEEECCCCCEEEECCCCCCC DDYELVYQNASYRLYRLKP HHHHHHEECCCEEEEEECC >Mature Secondary Structure MRWFINAQKMVVFLLLLGSGFLAVYNLDGYPDFMALDEGFRLYFARNVTEHGKWAILTQD CCEEECHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCEEEEEECCCCCCCEEEEECC GYQEYWRDSTGLLVLGSVIAAFKLFGPSLWLARLLVSVFLIAGVVTVYLVVHNWYGQQAA CHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ILAVALFLFFGPPWLNSVTMGRCVYGEVPALVLFITGCWLWSRAVIQPSRFLPAASLTFA HHHHHHHHHHCCCCCCCHHCCCEECCCHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHH LAVLAKDLFAPVIIAAIVITSVYQRWRGVIVPRLCVILPMVACLVAFTGWSLFQYIMSLL HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGFGHQHNLVHLSLSRVMIVSPLLWFQNAKFLYDNGVLFVIPSVLYVLFIRKTNIDSGFL HCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHH VLSFFLVVWSIWYIGFSIGWPRYAYPIWAVGGIMLAILLDDIRVMMHRYITEEPKRLLAQ HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAYPIFIGLSCVIIVLWPAQNTVRRLFAEANDDAQMMAMYIDRYIPADARIVSGQWDIWF HHHHHHHHHHHHEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCEEEEE YSSRTYIPIPAEYYESKIAKQVGKHVAISHFTDMNDLRAEYIIDGHENQVVEMVPFSSLQ ECCEEEECCCHHHHHHHHHHHHCCCEEHHHCCCHHHCCHHHEEECCCCCEEEECCCCCCC DDYELVYQNASYRLYRLKP HHHHHHEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA