| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527152
Identifier: 222527152
GI number: 222527152
Start: 4881995
End: 4882954
Strand: Reverse
Name: 222527152
Synonym: Chy400_3934
Alternate gene names: NA
Gene position: 4882954-4881995 (Counterclockwise)
Preceding gene: 222527153
Following gene: 222527151
Centisome position: 92.67
GC content: 57.5
Gene sequence:
>960_bases ATGCGTGTTCTGCTTTCGTGGCTACTCCGTCTGGTCGGGCCGGCGCTGTTGCTGTGGTTTATCGTGACCTGCGATCTCAA CCTGTTGTGGCAGACTATGCGTTCGGCTGATCTGGTGCCGGTTCTCTGGTCGCTGGCCCTGCTGCCACCGTTCATTATCA TCAAGTCGTGGCGATGGATTCAGATCATGCGGGCGATGAATCTCTCCCTCGATCTGCCAACGGCCTGTGCCCTCTACATG GTCGGTATCTTTTACGGAACGACAACGCCGGGGCAAGCTGGTGATCTGTTGAAGGCGATGTATCTGCGCGAACGGGGTCA ACCGACAGCGCCGGCACTGCTCTCGGTTGTGCTGGATCGGCTGTGTGATCTGATCATTATGGCCCTGTTGGGGATGATTG GCGTCTTCGCGCTGGGTCAGCTCCTCCCCAGCCGTGAGCTACAACAGATGATCGTGATCGCGATGGGTGTTGGTCTGCTC ACGATCACGGTGGTCTTGACGGCAAGGCGGCCACGTTCGTGGGTGCTGACCACACTCTTGCCGCGATTTGCGCCACGGCT GCGCTCCCGCCTGGATCGCTGGAATGAGCAGATGCACAGTCTGACGCTGACGCCGACCCTTATCGCAACGCTCGGTGGGG CAACGCTGGTCTCGGCCTTTTTCACCTTCTTCCGACTCTGGTTGCTCTTCCTGGCCCTTGATCTAAGTGCCGTGCCGTTC CTGGTCTTTGTTGGTGCATCGGCGTTGATTGCCGTGTTGCAGGCATTGCCCATCTCGATTGGCGGTCTTGGCGTGCGTGA TGTGGTACTGGTCGCGATTCTCGCCGCCTACGGCTATTCACAAGAGCAGGCGTTAACGCTATCGGCGCTCTTCTTGCTCA TCAATGTTGAACACATTATCGTCGGCTTTATCGTTTCGTTATGGTTTCCCCTCGGGCGAAGTGGTACAATTACTCCATGA
Upstream 100 bases:
>100_bases TGGCAGCATTATTGTCTTTATGTTCGGACTGAACGCCGAACAGGTTGCCGCACTCCGCTTTCAGCGCCCCCTGCGTAGCA ATGAAGAGGAGTAGTTCGTG
Downstream 100 bases:
>100_bases CATATCAGCGCTACGCGACCGTGTATGATGGTAGCGGTCAGATACGTTTTGCGCTGCTGACCGCCCTCTATCTGGAAGAG TTGTTGCAACGCCATCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MRVLLSWLLRLVGPALLLWFIVTCDLNLLWQTMRSADLVPVLWSLALLPPFIIIKSWRWIQIMRAMNLSLDLPTACALYM VGIFYGTTTPGQAGDLLKAMYLRERGQPTAPALLSVVLDRLCDLIIMALLGMIGVFALGQLLPSRELQQMIVIAMGVGLL TITVVLTARRPRSWVLTTLLPRFAPRLRSRLDRWNEQMHSLTLTPTLIATLGGATLVSAFFTFFRLWLLFLALDLSAVPF LVFVGASALIAVLQALPISIGGLGVRDVVLVAILAAYGYSQEQALTLSALFLLINVEHIIVGFIVSLWFPLGRSGTITP
Sequences:
>Translated_319_residues MRVLLSWLLRLVGPALLLWFIVTCDLNLLWQTMRSADLVPVLWSLALLPPFIIIKSWRWIQIMRAMNLSLDLPTACALYM VGIFYGTTTPGQAGDLLKAMYLRERGQPTAPALLSVVLDRLCDLIIMALLGMIGVFALGQLLPSRELQQMIVIAMGVGLL TITVVLTARRPRSWVLTTLLPRFAPRLRSRLDRWNEQMHSLTLTPTLIATLGGATLVSAFFTFFRLWLLFLALDLSAVPF LVFVGASALIAVLQALPISIGGLGVRDVVLVAILAAYGYSQEQALTLSALFLLINVEHIIVGFIVSLWFPLGRSGTITP >Mature_319_residues MRVLLSWLLRLVGPALLLWFIVTCDLNLLWQTMRSADLVPVLWSLALLPPFIIIKSWRWIQIMRAMNLSLDLPTACALYM VGIFYGTTTPGQAGDLLKAMYLRERGQPTAPALLSVVLDRLCDLIIMALLGMIGVFALGQLLPSRELQQMIVIAMGVGLL TITVVLTARRPRSWVLTTLLPRFAPRLRSRLDRWNEQMHSLTLTPTLIATLGGATLVSAFFTFFRLWLLFLALDLSAVPF LVFVGASALIAVLQALPISIGGLGVRDVVLVAILAAYGYSQEQALTLSALFLLINVEHIIVGFIVSLWFPLGRSGTITP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35221; Mature: 35221
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLLSWLLRLVGPALLLWFIVTCDLNLLWQTMRSADLVPVLWSLALLPPFIIIKSWRWI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QIMRAMNLSLDLPTACALYMVGIFYGTTTPGQAGDLLKAMYLRERGQPTAPALLSVVLDR HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH LCDLIIMALLGMIGVFALGQLLPSRELQQMIVIAMGVGLLTITVVLTARRPRSWVLTTLL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH PRFAPRLRSRLDRWNEQMHSLTLTPTLIATLGGATLVSAFFTFFRLWLLFLALDLSAVPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVFVGASALIAVLQALPISIGGLGVRDVVLVAILAAYGYSQEQALTLSALFLLINVEHII HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VGFIVSLWFPLGRSGTITP HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRVLLSWLLRLVGPALLLWFIVTCDLNLLWQTMRSADLVPVLWSLALLPPFIIIKSWRWI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QIMRAMNLSLDLPTACALYMVGIFYGTTTPGQAGDLLKAMYLRERGQPTAPALLSVVLDR HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH LCDLIIMALLGMIGVFALGQLLPSRELQQMIVIAMGVGLLTITVVLTARRPRSWVLTTLL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH PRFAPRLRSRLDRWNEQMHSLTLTPTLIATLGGATLVSAFFTFFRLWLLFLALDLSAVPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVFVGASALIAVLQALPISIGGLGVRDVVLVAILAAYGYSQEQALTLSALFLLINVEHII HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VGFIVSLWFPLGRSGTITP HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA