| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527148
Identifier: 222527148
GI number: 222527148
Start: 4878658
End: 4879470
Strand: Reverse
Name: 222527148
Synonym: Chy400_3930
Alternate gene names: NA
Gene position: 4879470-4878658 (Counterclockwise)
Preceding gene: 222527149
Following gene: 222527147
Centisome position: 92.61
GC content: 54.61
Gene sequence:
>813_bases ATGTACCACGACGATGATGATGACGATGAGATTCGACAGCGGGCCAGACGGCTGATGCGTTTGCGCCGTGAACGCGAATG GTTCGATGACGACGATTATTTGGATGTGCAACCCAGAATCGGTTATCGGTCACAGCCAATCCGAAGTGGTATTTCGGGTT CGGTCATCGTTCTCCTAATAGTCGTGCTGTTGATCGGGATTGGCGGTTTCTGGATAACACAGCGCATCAGTGCCCTTGGC AGTGCAATCCCGAATGTGCAGGTGATCGTCCAGACGCCGACACCCCAGATCATCAGCGGTGCGGCTGTCGTGCAGCGAAT ACAGCAACTCAGCCGACTCGAAACCAGCAAATACACCATTGAGCGGGTTATTGATATCCGCCAGGGCAGCAATATTCCGA TTATCGGTGATTGGCTGGCCAGCGATGCGATATTACTCATCGCTCACGGCACGGTGGTGGTAGGGGTCGATCTGAGTCAG ATCACCCCTGATGCGGTCACTGTTTCGCCTGATGGCCGGCAAATTACCGTGCGTCTACCACCGGTACAGGTCTTTAGCGC AACCCTTGACAACAGCAAAACTCGTGTCTACAGTCGTGAACGTGGTTTACTGGCTCCAGACAATCCAAATCTGGAGACAA TAGCTCGCCAGGCGGCTGAACAGCAAATTCTGCAGGCAGCCTGCGAGGATGGGATTATGGAGGAGGGTACGCGCAATGCA GAGCTGGCACTCCGCCAGTTTCTGGGCCTGATCGATGGTGCAGTTGTCGAGGTCGTGACCTCACCTCCAGCATCATGTAC GGTCTCGCCATGA
Upstream 100 bases:
>100_bases TTACCGCCTCTATGGCCTGGGTGCGGTTGCAATTCATGTCGGTGCAAAAAAGATGTAGTGACAATGACCATCACTTCAAA CACTTGCATGAGGTTGCCCC
Downstream 100 bases:
>100_bases TGGAAACGATAAAGGCGCTTCACATGAGTGTTCCCGTATGGAGTAGTGATTGGGGGATTGGGAGAATACGCTGATGAATA CCTGCTGCCTATCTTCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MYHDDDDDDEIRQRARRLMRLRREREWFDDDDYLDVQPRIGYRSQPIRSGISGSVIVLLIVVLLIGIGGFWITQRISALG SAIPNVQVIVQTPTPQIISGAAVVQRIQQLSRLETSKYTIERVIDIRQGSNIPIIGDWLASDAILLIAHGTVVVGVDLSQ ITPDAVTVSPDGRQITVRLPPVQVFSATLDNSKTRVYSRERGLLAPDNPNLETIARQAAEQQILQAACEDGIMEEGTRNA ELALRQFLGLIDGAVVEVVTSPPASCTVSP
Sequences:
>Translated_270_residues MYHDDDDDDEIRQRARRLMRLRREREWFDDDDYLDVQPRIGYRSQPIRSGISGSVIVLLIVVLLIGIGGFWITQRISALG SAIPNVQVIVQTPTPQIISGAAVVQRIQQLSRLETSKYTIERVIDIRQGSNIPIIGDWLASDAILLIAHGTVVVGVDLSQ ITPDAVTVSPDGRQITVRLPPVQVFSATLDNSKTRVYSRERGLLAPDNPNLETIARQAAEQQILQAACEDGIMEEGTRNA ELALRQFLGLIDGAVVEVVTSPPASCTVSP >Mature_270_residues MYHDDDDDDEIRQRARRLMRLRREREWFDDDDYLDVQPRIGYRSQPIRSGISGSVIVLLIVVLLIGIGGFWITQRISALG SAIPNVQVIVQTPTPQIISGAAVVQRIQQLSRLETSKYTIERVIDIRQGSNIPIIGDWLASDAILLIAHGTVVVGVDLSQ ITPDAVTVSPDGRQITVRLPPVQVFSATLDNSKTRVYSRERGLLAPDNPNLETIARQAAEQQILQAACEDGIMEEGTRNA ELALRQFLGLIDGAVVEVVTSPPASCTVSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29726; Mature: 29726
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHDDDDDDEIRQRARRLMRLRREREWFDDDDYLDVQPRIGYRSQPIRSGISGSVIVLLI CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHCCCCCHHHHHHH VVLLIGIGGFWITQRISALGSAIPNVQVIVQTPTPQIISGAAVVQRIQQLSRLETSKYTI HHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH ERVIDIRQGSNIPIIGDWLASDAILLIAHGTVVVGVDLSQITPDAVTVSPDGRQITVRLP HHHHHHHCCCCCCEEEHHHCCCEEEEEECCEEEEEEEHHHCCCCEEEECCCCCEEEEECC PVQVFSATLDNSKTRVYSRERGLLAPDNPNLETIARQAAEQQILQAACEDGIMEEGTRNA CHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCHH ELALRQFLGLIDGAVVEVVTSPPASCTVSP HHHHHHHHHHHHHHHHEEECCCCCCCCCCC >Mature Secondary Structure MYHDDDDDDEIRQRARRLMRLRREREWFDDDDYLDVQPRIGYRSQPIRSGISGSVIVLLI CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHCCCCCHHHHHHH VVLLIGIGGFWITQRISALGSAIPNVQVIVQTPTPQIISGAAVVQRIQQLSRLETSKYTI HHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH ERVIDIRQGSNIPIIGDWLASDAILLIAHGTVVVGVDLSQITPDAVTVSPDGRQITVRLP HHHHHHHCCCCCCEEEHHHCCCEEEEEECCEEEEEEEHHHCCCCEEEECCCCCEEEEECC PVQVFSATLDNSKTRVYSRERGLLAPDNPNLETIARQAAEQQILQAACEDGIMEEGTRNA CHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCHH ELALRQFLGLIDGAVVEVVTSPPASCTVSP HHHHHHHHHHHHHHHHEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA