| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527057
Identifier: 222527057
GI number: 222527057
Start: 4780810
End: 4781424
Strand: Reverse
Name: 222527057
Synonym: Chy400_3836
Alternate gene names: NA
Gene position: 4781424-4780810 (Counterclockwise)
Preceding gene: 222527060
Following gene: 222527054
Centisome position: 90.75
GC content: 58.37
Gene sequence:
>615_bases ATGGCCTATCCTTCAACCTGCTCTACAGACAACCTATCCGCGGTCATCCGCCTAATCTGCGTCTATCCGTGTCCCCGCCA AATGCTGCCCACGGCCGCTGGTGGATATGCTAATGGCCCATCCTTCAACCTGCTCTACAGACAACCTATCCGCGGTCATC CGCCTAATCTGCGTCTATCCGTGTCCCCGCCAAATGCTGCCCACGGCCGCTGGTGGATATGCCAATGGCCCATCCTTCAA CCTGCTCTACAGACAACCTATCCGCGGTCATCCGCCCAATCTGCGTCTATCCGTGTCCCCGCCAAATGCTGCCCACGGCC GCTGGTGGATATGCCAATGGCCCATCCTTCAACCTGCTCTACAGACAACCTATCCGCGGTCATCCGCCTAATCTGCGTCT ATCCGTGTCCCCGCCAAATGCTGCCCACGGCCGCTGGTGGATATGCCAATGGCCCATCCTTCAACCTGCTCTACAGACAA CCTATCCGCGGTCATCCGCCTAATCTGCGTCTATCCGTGTCCCCGCCAAATGCTGCCCACGGCCGCTGGTGGATATGCCA ATGGCCCATCCTTCAACCTGCTCTACAGACAACCTATCCGCGTGCATCCGCCTAA
Upstream 100 bases:
>100_bases TCAACCTGCTCTACAGACAACCTATCCGCGGTCATCCGCCTAATCTGCGTCTATCCGTGTCCCCGCCAAATGCTGCCCAC GGCCGCTGGTGGATATGCCA
Downstream 100 bases:
>100_bases TCCGCGTCTATCCGTGTCCCCGCATATGGAGCTGCAAGGGCGTGTAGACTTCAACGTCCAGATCACGTTTAGGGTGTCTT CTCTTCCGCAGTTAACCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MAYPSTCSTDNLSAVIRLICVYPCPRQMLPTAAGGYANGPSFNLLYRQPIRGHPPNLRLSVSPPNAAHGRWWICQWPILQ PALQTTYPRSSAQSASIRVPAKCCPRPLVDMPMAHPSTCSTDNLSAVIRLICVYPCPRQMLPTAAGGYANGPSFNLLYRQ PIRGHPPNLRLSVSPPNAAHGRWWICQWPILQPALQTTYPRASA
Sequences:
>Translated_204_residues MAYPSTCSTDNLSAVIRLICVYPCPRQMLPTAAGGYANGPSFNLLYRQPIRGHPPNLRLSVSPPNAAHGRWWICQWPILQ PALQTTYPRSSAQSASIRVPAKCCPRPLVDMPMAHPSTCSTDNLSAVIRLICVYPCPRQMLPTAAGGYANGPSFNLLYRQ PIRGHPPNLRLSVSPPNAAHGRWWICQWPILQPALQTTYPRASA >Mature_203_residues AYPSTCSTDNLSAVIRLICVYPCPRQMLPTAAGGYANGPSFNLLYRQPIRGHPPNLRLSVSPPNAAHGRWWICQWPILQP ALQTTYPRSSAQSASIRVPAKCCPRPLVDMPMAHPSTCSTDNLSAVIRLICVYPCPRQMLPTAAGGYANGPSFNLLYRQP IRGHPPNLRLSVSPPNAAHGRWWICQWPILQPALQTTYPRASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22450; Mature: 22319
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYPSTCSTDNLSAVIRLICVYPCPRQMLPTAAGGYANGPSFNLLYRQPIRGHPPNLRLS CCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE VSPPNAAHGRWWICQWPILQPALQTTYPRSSAQSASIRVPAKCCPRPLVDMPMAHPSTCS ECCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCCCC TDNLSAVIRLICVYPCPRQMLPTAAGGYANGPSFNLLYRQPIRGHPPNLRLSVSPPNAAH CCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCC GRWWICQWPILQPALQTTYPRASA CCEEEEECCHHHHHHHHCCCCCCC >Mature Secondary Structure AYPSTCSTDNLSAVIRLICVYPCPRQMLPTAAGGYANGPSFNLLYRQPIRGHPPNLRLS CCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE VSPPNAAHGRWWICQWPILQPALQTTYPRSSAQSASIRVPAKCCPRPLVDMPMAHPSTCS ECCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCCCC TDNLSAVIRLICVYPCPRQMLPTAAGGYANGPSFNLLYRQPIRGHPPNLRLSVSPPNAAH CCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCC GRWWICQWPILQPALQTTYPRASA CCEEEEECCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA