| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527015
Identifier: 222527015
GI number: 222527015
Start: 4726569
End: 4727273
Strand: Direct
Name: 222527015
Synonym: Chy400_3794
Alternate gene names: NA
Gene position: 4726569-4727273 (Clockwise)
Preceding gene: 222527014
Following gene: 222527023
Centisome position: 89.71
GC content: 56.88
Gene sequence:
>705_bases ATGAGTGATCTCCTCGGTGCTTTGGGTCAGGCCTGGCCACGGCTACTCCTCTATCCAGGTGGCCTCAGTGCAATGCTGGC CGTCGTTATGTTTGCTCGTCTGCGGGGTGTGACCATTACTCGCGACCGTCATATCACAACGCTCATCGACACCTTGCCGC CACTGTGCGTCCTCACACTTCTCCCACTGGCACCGGCAGCTTCATTTGCCTACGGTCTTGATCTGGCGACCACATTACTC TTGCTCATGTGGCCGGTTATGCACCAGGCCGCTCAGGAACGGCGTGATCCCCGCGACGTGATCAATCAATATCTCCCCAT CATCATGGCGGCCATGGTATTTGCCAGTATCACTAACACCCTCAGCCTCAGTGGCCTGCTCCGCTGGCCGGCAGAACCAC TGCCGCAGATCGGTTACAGTCTGGGCATCGTGGCATGGTTTGTTGGATCATCTCAAATTATGTCAACAAGGCCCAATCTG GCAACCGCCTGTAGCGAGCTGGGGTTCGTGATGGTCGGTGTTTTGCCGCTGAGTGCTGGATTGCAGGCCCTGCCTGTTCC TGGCGAAATAGCGGGATGGGGAATTGTGTTCGCAAGTGTGGTTATCGCGATGGTTATCACCATCGGCGCCGGCTATCTTC CGCGCTGGATACGCTATCTGATAGCCGGTGCAACACTGCTGGCGAGTGGTCTGGCGATAGGATAA
Upstream 100 bases:
>100_bases GATCACGAACTGCTGCGACTGCACCCGGTCTGGCACTGCTGGCCCTGATCTGTTTGATCGGTGCTCTGGCCTGGCTGATG TTGCGCTGGCGGAGAGGTGT
Downstream 100 bases:
>100_bases GCTATGCGGCATCGACCGAGCGATAACCACCATTCCCGTGTGGATGGAAGGTCTCACTCAGGTTCGCAATGATCGTGCGG GCCAGATTCATCTCCGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSDLLGALGQAWPRLLLYPGGLSAMLAVVMFARLRGVTITRDRHITTLIDTLPPLCVLTLLPLAPAASFAYGLDLATTLL LLMWPVMHQAAQERRDPRDVINQYLPIIMAAMVFASITNTLSLSGLLRWPAEPLPQIGYSLGIVAWFVGSSQIMSTRPNL ATACSELGFVMVGVLPLSAGLQALPVPGEIAGWGIVFASVVIAMVITIGAGYLPRWIRYLIAGATLLASGLAIG
Sequences:
>Translated_234_residues MSDLLGALGQAWPRLLLYPGGLSAMLAVVMFARLRGVTITRDRHITTLIDTLPPLCVLTLLPLAPAASFAYGLDLATTLL LLMWPVMHQAAQERRDPRDVINQYLPIIMAAMVFASITNTLSLSGLLRWPAEPLPQIGYSLGIVAWFVGSSQIMSTRPNL ATACSELGFVMVGVLPLSAGLQALPVPGEIAGWGIVFASVVIAMVITIGAGYLPRWIRYLIAGATLLASGLAIG >Mature_233_residues SDLLGALGQAWPRLLLYPGGLSAMLAVVMFARLRGVTITRDRHITTLIDTLPPLCVLTLLPLAPAASFAYGLDLATTLLL LMWPVMHQAAQERRDPRDVINQYLPIIMAAMVFASITNTLSLSGLLRWPAEPLPQIGYSLGIVAWFVGSSQIMSTRPNLA TACSELGFVMVGVLPLSAGLQALPVPGEIAGWGIVFASVVIAMVITIGAGYLPRWIRYLIAGATLLASGLAIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24904; Mature: 24773
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLLGALGQAWPRLLLYPGGLSAMLAVVMFARLRGVTITRDRHITTLIDTLPPLCVLTL CHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHH LPLAPAASFAYGLDLATTLLLLMWPVMHQAAQERRDPRDVINQYLPIIMAAMVFASITNT HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LSLSGLLRWPAEPLPQIGYSLGIVAWFVGSSQIMSTRPNLATACSELGFVMVGVLPLSAG HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC LQALPVPGEIAGWGIVFASVVIAMVITIGAGYLPRWIRYLIAGATLLASGLAIG CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDLLGALGQAWPRLLLYPGGLSAMLAVVMFARLRGVTITRDRHITTLIDTLPPLCVLTL HHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHH LPLAPAASFAYGLDLATTLLLLMWPVMHQAAQERRDPRDVINQYLPIIMAAMVFASITNT HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LSLSGLLRWPAEPLPQIGYSLGIVAWFVGSSQIMSTRPNLATACSELGFVMVGVLPLSAG HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC LQALPVPGEIAGWGIVFASVVIAMVITIGAGYLPRWIRYLIAGATLLASGLAIG CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA