Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222526956

Identifier: 222526956

GI number: 222526956

Start: 4654854

End: 4655861

Strand: Direct

Name: 222526956

Synonym: Chy400_3734

Alternate gene names: NA

Gene position: 4654854-4655861 (Clockwise)

Preceding gene: 222526954

Following gene: 222526957

Centisome position: 88.35

GC content: 56.85

Gene sequence:

>1008_bases
ATGAGGTCGCGCTGGCTGCACCTGTTGTTCATGGCAGTTGTAGCGACGTTATTGACCGCGCTGATGCCGGCTGTGCCAGC
TCAGGCGCAGAACCGCATCTGCTTTAATGAAGTTCCCGATTGTATTGAGGGACGATTTGCCGAATACTGGCAGCAGAACG
GTGGGTTGCCAGTGTTTGGTTTTCCGATAACACCGGCTTTCCAGCAAGAGGTTGAAGGCAAGGTGCGGCTGGTGCAAATC
TTTGAGCGCAATCGCTTTGAGCTGCATCCAGAGAACGCGCGCCCATATGACGTTTTGCTCGGTCGGCTGGGTGACGATCT
CTTGCAGCGGAGGGGCACACCCTGGCAAAACGAACCCAAAGCTCCAACCACATCACAGGCCGGTTGTCGCTACTTCGCAC
AGACACAACACCTGGTCTGCGATGCATTCCTGCGCTACTGGCAATCGCATGGCCTGGACTTCGACGGACGGCGTGGCTTT
AGCGAAGCTGAGAGTCTGGCCCTGTTTGGATTGCCGCTCACCGAGCCACGCCTGGAGACCAACTCTTCCGGCGATACGGT
CTTGACCCAGTGGTTCGAGCGGGCGCGCTTTGAATTACACACCAATCTTGGGCCTGACGTTGTCCTGCTTGGTTTGTTGG
GCCGCGAGGCATTTGCCCCGCAACCCCCACAACCAGCGCCACCACCGGCTCCAGCCGATCCCTGCGCCGATATTCCGGCA
CCGATCAATGGCGAGATCACCACTGCCTGTATTACGGATAACGTTACCGAGATAGCTGCCGGTGGTTTTGGCTTTACCCC
CGGTGAACGGGTAGGCACGTATATCACGCAGGTAGAAACCGGTCAGGTAGTTGGCCTTGAGGTGGTAGGCGATAACACAG
CCGATGCCGATGGCTTCTACGGTTTGATAATCCTCGGGCCAAACCTGTTACCGAAGGGACTGTATGCGCTCACCATGGAA
GGGGTACAGTCGGGCTTTAAGGTTATCGTCTACTTCAAGCGGGTATAG

Upstream 100 bases:

>100_bases
TTTAACTAGTGAACACATGTTTGACTGTACAACCTGCCTCAGGTATAATACAAGAGCCGGTCACACCGTTGTATGCTCTT
GAAACTGCATGGAGGTTTTT

Downstream 100 bases:

>100_bases
CCGGTAGTGTTGTAGCCTTCATACTCCCCACGCAGGCGACCGGTGCGTGGGGAGTGTTTGATGTATTGGCAGGATGGTCT
CCACTCAGTGTGTAAGACTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MRSRWLHLLFMAVVATLLTALMPAVPAQAQNRICFNEVPDCIEGRFAEYWQQNGGLPVFGFPITPAFQQEVEGKVRLVQI
FERNRFELHPENARPYDVLLGRLGDDLLQRRGTPWQNEPKAPTTSQAGCRYFAQTQHLVCDAFLRYWQSHGLDFDGRRGF
SEAESLALFGLPLTEPRLETNSSGDTVLTQWFERARFELHTNLGPDVVLLGLLGREAFAPQPPQPAPPPAPADPCADIPA
PINGEITTACITDNVTEIAAGGFGFTPGERVGTYITQVETGQVVGLEVVGDNTADADGFYGLIILGPNLLPKGLYALTME
GVQSGFKVIVYFKRV

Sequences:

>Translated_335_residues
MRSRWLHLLFMAVVATLLTALMPAVPAQAQNRICFNEVPDCIEGRFAEYWQQNGGLPVFGFPITPAFQQEVEGKVRLVQI
FERNRFELHPENARPYDVLLGRLGDDLLQRRGTPWQNEPKAPTTSQAGCRYFAQTQHLVCDAFLRYWQSHGLDFDGRRGF
SEAESLALFGLPLTEPRLETNSSGDTVLTQWFERARFELHTNLGPDVVLLGLLGREAFAPQPPQPAPPPAPADPCADIPA
PINGEITTACITDNVTEIAAGGFGFTPGERVGTYITQVETGQVVGLEVVGDNTADADGFYGLIILGPNLLPKGLYALTME
GVQSGFKVIVYFKRV
>Mature_335_residues
MRSRWLHLLFMAVVATLLTALMPAVPAQAQNRICFNEVPDCIEGRFAEYWQQNGGLPVFGFPITPAFQQEVEGKVRLVQI
FERNRFELHPENARPYDVLLGRLGDDLLQRRGTPWQNEPKAPTTSQAGCRYFAQTQHLVCDAFLRYWQSHGLDFDGRRGF
SEAESLALFGLPLTEPRLETNSSGDTVLTQWFERARFELHTNLGPDVVLLGLLGREAFAPQPPQPAPPPAPADPCADIPA
PINGEITTACITDNVTEIAAGGFGFTPGERVGTYITQVETGQVVGLEVVGDNTADADGFYGLIILGPNLLPKGLYALTME
GVQSGFKVIVYFKRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36917; Mature: 36917

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRWLHLLFMAVVATLLTALMPAVPAQAQNRICFNEVPDCIEGRFAEYWQQNGGLPVFG
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHCCHHHHHHHHHHHHHCCCCEEEE
FPITPAFQQEVEGKVRLVQIFERNRFELHPENARPYDVLLGRLGDDLLQRRGTPWQNEPK
CCCCHHHHHHHCCCEEEEEEHHCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
APTTSQAGCRYFAQTQHLVCDAFLRYWQSHGLDFDGRRGFSEAESLALFGLPLTEPRLET
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCEEEECCCCCCCCCCC
NSSGDTVLTQWFERARFELHTNLGPDVVLLGLLGREAFAPQPPQPAPPPAPADPCADIPA
CCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCC
PINGEITTACITDNVTEIAAGGFGFTPGERVGTYITQVETGQVVGLEVVGDNTADADGFY
CCCCCEEEEEECCCHHHHHCCCCCCCCHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCE
GLIILGPNLLPKGLYALTMEGVQSGFKVIVYFKRV
EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECC
>Mature Secondary Structure
MRSRWLHLLFMAVVATLLTALMPAVPAQAQNRICFNEVPDCIEGRFAEYWQQNGGLPVFG
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHCCHHHHHHHHHHHHHCCCCEEEE
FPITPAFQQEVEGKVRLVQIFERNRFELHPENARPYDVLLGRLGDDLLQRRGTPWQNEPK
CCCCHHHHHHHCCCEEEEEEHHCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
APTTSQAGCRYFAQTQHLVCDAFLRYWQSHGLDFDGRRGFSEAESLALFGLPLTEPRLET
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCEEEECCCCCCCCCCC
NSSGDTVLTQWFERARFELHTNLGPDVVLLGLLGREAFAPQPPQPAPPPAPADPCADIPA
CCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCC
PINGEITTACITDNVTEIAAGGFGFTPGERVGTYITQVETGQVVGLEVVGDNTADADGFY
CCCCCEEEEEECCCHHHHHCCCCCCCCHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCE
GLIILGPNLLPKGLYALTMEGVQSGFKVIVYFKRV
EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA