| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yiiP [C]
Identifier: 222526953
GI number: 222526953
Start: 4650509
End: 4651483
Strand: Direct
Name: yiiP [C]
Synonym: Chy400_3731
Alternate gene names: 222526953
Gene position: 4650509-4651483 (Clockwise)
Preceding gene: 222526951
Following gene: 222526954
Centisome position: 88.26
GC content: 58.77
Gene sequence:
>975_bases GTGAGTCAACGACAAACGCTAACCCGCTATGCCTGGCTCGCAATTGGCGCTGCCATCGCGACCATTGGTCTTAAATCAGG CGCATTCTGGTTGACCGGCTCAATCGGTATTCTGGCCGATGCCCTCGAATCGCTGGTGAACCTGGCTGCGGCTGTTATTG CATTGATTATGTTAACGATTGCCGCGCGCCCCGCCGATGAAGAGCACGCCTACGGGCACGGCAAGGCCGAATACTTTGCC GGTGCGTTGGAAGGTGTCTTCATCATTATTGCCGCCATGGGGATTGGCTGGACAGCCATTCAGCGCATTTTATCTCCACA ACCACTCGATCATACCGTCGCCGGTTTGCTGGTCGCCGGTATTGCTACCCTGATCAACGGTGGCGTAGCCATCGTTCTGT TGCGGGCCGGACGGCGCCACGACTCGCTCACCCTCGAAGCTGATGGTCAACACCTGCTGACCGATGTCTGGACATCGCTG GCAGTGGTGGCCGGCATTGGTCTGGTCGCTCTCACCGGCTGGTATGTCCTCGATCCGCTGATTGCACTGGCAGTAGCGGT GAATATTACCTTCACCGGAATCGGGCTGGTACGCCGTGCTGTCCTGGGGCTGATGGATACCGCTTTGCCGGCGAGCGAGC TGGCGGCAATCCACAATGCGCTCGCCGATCTCAACAATTACGGGTGCGATTACCATGCTCTGCGTACCCGTCAATCAGGC GCAAGGCGCTTTATCTCGTTTCACCTTCTTGTACCCGACACCTGGAGTATCCAACAGGCGCACGCGATGGCCGAGCAGGT CGAAGCGGCAGTGCGGGCTGCGGTGCCAAACAGCACGGTCTTCACCCATCTCGAACCGCGCAACGATCCAACCGCACTTG CCGATGTTGGGCTGGATCGAGATGAAGCGTGTGTGCTTGCCGACTCTCACTCTCCTTTCCTCGCGGCTGAGCAGGCAGAG AGGGGAAGGTGGTAA
Upstream 100 bases:
>100_bases ACCGATTGCGCTTCCCGAAGATTCGGCTGCGATCTTGCCAAAACCGCCATGATCCGGCTATTCTGGTTGGTGAAACGTGG AACTAACGCGGAGCACAACG
Downstream 100 bases:
>100_bases ATCGCTTGCACCACCTTCCCCGGCTTGCTCATCTTTCCCACCAGTAGAGATGCTTGGCCACCCCTTGCAGAACACAGCTA ACACCAGTATGCCTGGTACG
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSQRQTLTRYAWLAIGAAIATIGLKSGAFWLTGSIGILADALESLVNLAAAVIALIMLTIAARPADEEHAYGHGKAEYFA GALEGVFIIIAAMGIGWTAIQRILSPQPLDHTVAGLLVAGIATLINGGVAIVLLRAGRRHDSLTLEADGQHLLTDVWTSL AVVAGIGLVALTGWYVLDPLIALAVAVNITFTGIGLVRRAVLGLMDTALPASELAAIHNALADLNNYGCDYHALRTRQSG ARRFISFHLLVPDTWSIQQAHAMAEQVEAAVRAAVPNSTVFTHLEPRNDPTALADVGLDRDEACVLADSHSPFLAAEQAE RGRW
Sequences:
>Translated_324_residues MSQRQTLTRYAWLAIGAAIATIGLKSGAFWLTGSIGILADALESLVNLAAAVIALIMLTIAARPADEEHAYGHGKAEYFA GALEGVFIIIAAMGIGWTAIQRILSPQPLDHTVAGLLVAGIATLINGGVAIVLLRAGRRHDSLTLEADGQHLLTDVWTSL AVVAGIGLVALTGWYVLDPLIALAVAVNITFTGIGLVRRAVLGLMDTALPASELAAIHNALADLNNYGCDYHALRTRQSG ARRFISFHLLVPDTWSIQQAHAMAEQVEAAVRAAVPNSTVFTHLEPRNDPTALADVGLDRDEACVLADSHSPFLAAEQAE RGRW >Mature_323_residues SQRQTLTRYAWLAIGAAIATIGLKSGAFWLTGSIGILADALESLVNLAAAVIALIMLTIAARPADEEHAYGHGKAEYFAG ALEGVFIIIAAMGIGWTAIQRILSPQPLDHTVAGLLVAGIATLINGGVAIVLLRAGRRHDSLTLEADGQHLLTDVWTSLA VVAGIGLVALTGWYVLDPLIALAVAVNITFTGIGLVRRAVLGLMDTALPASELAAIHNALADLNNYGCDYHALRTRQSGA RRFISFHLLVPDTWSIQQAHAMAEQVEAAVRAAVPNSTVFTHLEPRNDPTALADVGLDRDEACVLADSHSPFLAAEQAER GRW
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=264, Percent_Identity=35.6060606060606, Blast_Score=149, Evalue=3e-37, Organism=Caenorhabditis elegans, GI193210990, Length=253, Percent_Identity=26.8774703557312, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 34297; Mature: 34166
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRQTLTRYAWLAIGAAIATIGLKSGAFWLTGSIGILADALESLVNLAAAVIALIMLTI CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH AARPADEEHAYGHGKAEYFAGALEGVFIIIAAMGIGWTAIQRILSPQPLDHTVAGLLVAG HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH IATLINGGVAIVLLRAGRRHDSLTLEADGQHLLTDVWTSLAVVAGIGLVALTGWYVLDPL HHHHHCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALAVAVNITFTGIGLVRRAVLGLMDTALPASELAAIHNALADLNNYGCDYHALRTRQSG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ARRFISFHLLVPDTWSIQQAHAMAEQVEAAVRAAVPNSTVFTHLEPRNDPTALADVGLDR HHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCC DEACVLADSHSPFLAAEQAERGRW CCEEEEECCCCCCEEHHHHHCCCC >Mature Secondary Structure SQRQTLTRYAWLAIGAAIATIGLKSGAFWLTGSIGILADALESLVNLAAAVIALIMLTI CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH AARPADEEHAYGHGKAEYFAGALEGVFIIIAAMGIGWTAIQRILSPQPLDHTVAGLLVAG HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH IATLINGGVAIVLLRAGRRHDSLTLEADGQHLLTDVWTSLAVVAGIGLVALTGWYVLDPL HHHHHCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALAVAVNITFTGIGLVRRAVLGLMDTALPASELAAIHNALADLNNYGCDYHALRTRQSG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ARRFISFHLLVPDTWSIQQAHAMAEQVEAAVRAAVPNSTVFTHLEPRNDPTALADVGLDR HHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCC DEACVLADSHSPFLAAEQAERGRW CCEEEEECCCCCCEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]