Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is yjcG [C]

Identifier: 222526880

GI number: 222526880

Start: 4555683

End: 4557869

Strand: Direct

Name: yjcG [C]

Synonym: Chy400_3657

Alternate gene names: 222526880

Gene position: 4555683-4557869 (Clockwise)

Preceding gene: 222526879

Following gene: 222526881

Centisome position: 86.46

GC content: 57.29

Gene sequence:

>2187_bases
ATGAGCGCGCAATTCTGGCTTGGTCTGTTTCAACTTTTTCTGGTCGTCGGTGGCGCGCTGGCCGTGTCACTTTTCATCAT
TGATCGGCTCTTCCCTCCGGTACGGCAGACGACAGGATCAGATACGGCTAATGTCCGCAGACTGCGGATTGGCCCCGCTT
CAACCGCTGTCCCTCCTCCACTACGCTGGCCGCTGGCACCGGCCTGGTTGCCGCAATACTGGCAGGAAAACCTGCGTCTG
GTCGGGCCACTCCTCGTCATCTGGTTGCTGAGCTTTGTGCTACCGGTTGTGCTCTCAGCACCACTCAACCAGATCAGCAT
TCTGACCGGCTTCCCCCTCGGCTATTACATGAGTGCGCAGGGAACGCTCATCTGTTTCGTTGTGCTCATCTTCGTCTACA
ACTGGCGCATGCACATCCTTGATCGGCGGTACGGCGTCGATCCTCCCGAAACGCCAGATGCACAGCAGATACGCCGGCGC
TACTCGCTCCGCTATCTGGGATTCACCATCGGATTGCTGGTTCTGTTGATCGTCTTTATCATTCTTGAGACACAGTTTCG
CCTGCCATCGTTTCTCATCGATTGGAGCTTTCTTGCCCTGACGATTGGTCTCTACGCTGTGATCGGCATTCGTTCACGCG
CCGATACCCTCGATGCCTATTATGTTGCCGAGCGGAAAGTTCCCGGTATTCTCAACGGCCTGGCCACCGGTTCAGACTGG
ATGAGCGCAGCGTCGTTTATCAGTATGGCCGGCGCCCTCTATCTTTTGGGGTTTGAAGGGCTGGCCTATATCACCGGTTG
GACGGGTGGCTACGTGTTGCTGGTATTGCTCCTTGCCCCCTATCTACGCAAATTCGGTCAGTACACACTCGTCGATTTTA
TTGGTGCCCGCTATCCGGGCGCCGGCGCACGAGTGATCGCTGCCGTCCTCAGCATCATCATCTGCTTCACCTATGTCACG
GCACAGGTAACGGGGATCGGGATCATTATGAGCCGGTTTCTCGGTCTCAACTACATGGTCGGCGTGATCGTTGGCCTGGC
AGCCGTCCTGCTCTGTTCGTACCTTGGTGGGATGAAGGCGATCACCTGGACGCAAGGCGTGCAGGGGATTATTCTGGTGT
TTGCCTACCTGGTGCCGGTGACCTGGCTGGCCTTCAAGCTGACCGGCGTAGCCTTGCCGCAGGTTATGTACGGTGAAGCC
CTCAGCAATATTGATCGTCTGGAACAGGCGCAGGGGCTTGCGAGCTATGTTGCCCCCTTCAACGACTGGTCAATCTGGAA
CTATCTGGCCCTTTCGCTCTGTTTGATGCTGGGAACAGCCGGCATGCCGCACATTCTGGTGCGCTTCTACACCGTACCCA
CTGTCCGTGACAGTCGCAGTAGTGTAGCCTGGGCACTGGTCTGGATTTGTGTGCTCTATCTGACTGCACCCGCCTACGCT
GCCTTCTCACGCTGGGAGATTTTAAGCTCGGTGGTGGGGAGACCGGTTGCCGGGTTGCCTGAATGGACCAGCCGGTGGGC
AAGTACCGGTCTGCTCAAGATTGCCGATGCCCCTGAGGTGGGTGGCAATGGTGATGGTATTTTGCAGTACCACGAATTAC
AGATCGACCAGGATTTGGTGGTGTTATCTACGCCGGAGATTGCCGAACTACCGTCTACCGTCGTGGCATTAGTTGCTGCC
GGCGGTATGGCCGCAGCGCTCAGTACTGCCGATGGTCTGTTGATGGTGATCGCCTCGGCAACGGTACACGACATCTACCA
TCGTACCCTCAACCCACGCGCCTCTTCCCGTGAACGCCTGTTGCTTGGCCGACTGGCGATCCTGGTCGTCGCAATCCTGG
CGGCACTGACGGCATTGCAACGGTTGGCCATTATCGTACAACTGGTGGCCTGGGCCTTTTCGTTCGCCGCAGCGACGATC
TTTCCGGTGCTGGTGCTGGGCATTTTCTGGAAGCGCACGAACAGTCGTGGCGCAGTGGCCGGTATGATCAGCGGCTTCCT
GGTAACGGCCAGTTATATGGCGATTACGTACATTCTCCCCGAATGGACACTCTTTGGCATTTCCAGCTCGGCAGCCGGTA
TCTTCGGTCTCCCCGTCAATTTCCTGGTCACCTGGCTGGTCAGCCGGTATGGGCCACCACCTGATCCAGAAGTAACCGCA
CTGGTGGATTACGTGCGCTATCCGTGA

Upstream 100 bases:

>100_bases
TCGGGAAAGGCGCACGCTTCATCTTTACCCTACCGCTGGCACCGCAGATGGCGTTCGTGCGCGTAGACCATCCCGTCACG
GTTGAGGCAGTTGACACGCT

Downstream 100 bases:

>100_bases
TCACGCTGCGGAGATGACAGGTTGGCGTAGAACGGCGGGTTAAAGCGTCGGGGGTTCTGCGGAGCGGCGGGTTAACACCC
TGCCTCAATTCGTGGAAGGC

Product: SSS sodium solute transporter superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 728; Mature: 727

Protein sequence:

>728_residues
MSAQFWLGLFQLFLVVGGALAVSLFIIDRLFPPVRQTTGSDTANVRRLRIGPASTAVPPPLRWPLAPAWLPQYWQENLRL
VGPLLVIWLLSFVLPVVLSAPLNQISILTGFPLGYYMSAQGTLICFVVLIFVYNWRMHILDRRYGVDPPETPDAQQIRRR
YSLRYLGFTIGLLVLLIVFIILETQFRLPSFLIDWSFLALTIGLYAVIGIRSRADTLDAYYVAERKVPGILNGLATGSDW
MSAASFISMAGALYLLGFEGLAYITGWTGGYVLLVLLLAPYLRKFGQYTLVDFIGARYPGAGARVIAAVLSIIICFTYVT
AQVTGIGIIMSRFLGLNYMVGVIVGLAAVLLCSYLGGMKAITWTQGVQGIILVFAYLVPVTWLAFKLTGVALPQVMYGEA
LSNIDRLEQAQGLASYVAPFNDWSIWNYLALSLCLMLGTAGMPHILVRFYTVPTVRDSRSSVAWALVWICVLYLTAPAYA
AFSRWEILSSVVGRPVAGLPEWTSRWASTGLLKIADAPEVGGNGDGILQYHELQIDQDLVVLSTPEIAELPSTVVALVAA
GGMAAALSTADGLLMVIASATVHDIYHRTLNPRASSRERLLLGRLAILVVAILAALTALQRLAIIVQLVAWAFSFAAATI
FPVLVLGIFWKRTNSRGAVAGMISGFLVTASYMAITYILPEWTLFGISSSAAGIFGLPVNFLVTWLVSRYGPPPDPEVTA
LVDYVRYP

Sequences:

>Translated_728_residues
MSAQFWLGLFQLFLVVGGALAVSLFIIDRLFPPVRQTTGSDTANVRRLRIGPASTAVPPPLRWPLAPAWLPQYWQENLRL
VGPLLVIWLLSFVLPVVLSAPLNQISILTGFPLGYYMSAQGTLICFVVLIFVYNWRMHILDRRYGVDPPETPDAQQIRRR
YSLRYLGFTIGLLVLLIVFIILETQFRLPSFLIDWSFLALTIGLYAVIGIRSRADTLDAYYVAERKVPGILNGLATGSDW
MSAASFISMAGALYLLGFEGLAYITGWTGGYVLLVLLLAPYLRKFGQYTLVDFIGARYPGAGARVIAAVLSIIICFTYVT
AQVTGIGIIMSRFLGLNYMVGVIVGLAAVLLCSYLGGMKAITWTQGVQGIILVFAYLVPVTWLAFKLTGVALPQVMYGEA
LSNIDRLEQAQGLASYVAPFNDWSIWNYLALSLCLMLGTAGMPHILVRFYTVPTVRDSRSSVAWALVWICVLYLTAPAYA
AFSRWEILSSVVGRPVAGLPEWTSRWASTGLLKIADAPEVGGNGDGILQYHELQIDQDLVVLSTPEIAELPSTVVALVAA
GGMAAALSTADGLLMVIASATVHDIYHRTLNPRASSRERLLLGRLAILVVAILAALTALQRLAIIVQLVAWAFSFAAATI
FPVLVLGIFWKRTNSRGAVAGMISGFLVTASYMAITYILPEWTLFGISSSAAGIFGLPVNFLVTWLVSRYGPPPDPEVTA
LVDYVRYP
>Mature_727_residues
SAQFWLGLFQLFLVVGGALAVSLFIIDRLFPPVRQTTGSDTANVRRLRIGPASTAVPPPLRWPLAPAWLPQYWQENLRLV
GPLLVIWLLSFVLPVVLSAPLNQISILTGFPLGYYMSAQGTLICFVVLIFVYNWRMHILDRRYGVDPPETPDAQQIRRRY
SLRYLGFTIGLLVLLIVFIILETQFRLPSFLIDWSFLALTIGLYAVIGIRSRADTLDAYYVAERKVPGILNGLATGSDWM
SAASFISMAGALYLLGFEGLAYITGWTGGYVLLVLLLAPYLRKFGQYTLVDFIGARYPGAGARVIAAVLSIIICFTYVTA
QVTGIGIIMSRFLGLNYMVGVIVGLAAVLLCSYLGGMKAITWTQGVQGIILVFAYLVPVTWLAFKLTGVALPQVMYGEAL
SNIDRLEQAQGLASYVAPFNDWSIWNYLALSLCLMLGTAGMPHILVRFYTVPTVRDSRSSVAWALVWICVLYLTAPAYAA
FSRWEILSSVVGRPVAGLPEWTSRWASTGLLKIADAPEVGGNGDGILQYHELQIDQDLVVLSTPEIAELPSTVVALVAAG
GMAAALSTADGLLMVIASATVHDIYHRTLNPRASSRERLLLGRLAILVVAILAALTALQRLAIIVQLVAWAFSFAAATIF
PVLVLGIFWKRTNSRGAVAGMISGFLVTASYMAITYILPEWTLFGISSSAAGIFGLPVNFLVTWLVSRYGPPPDPEVTAL
VDYVRYP

Specific function: Unknown

COG id: COG4147

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI310128183, Length=539, Percent_Identity=25.0463821892393, Blast_Score=97, Evalue=8e-20,
Organism=Escherichia coli, GI1790503, Length=484, Percent_Identity=29.1322314049587, Blast_Score=175, Evalue=8e-45,
Organism=Escherichia coli, GI1787251, Length=470, Percent_Identity=26.8085106382979, Blast_Score=93, Evalue=6e-20,
Organism=Escherichia coli, GI87082237, Length=477, Percent_Identity=22.4318658280922, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR019899 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 79515; Mature: 79384

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQFWLGLFQLFLVVGGALAVSLFIIDRLFPPVRQTTGSDTANVRRLRIGPASTAVPPP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEECCCCCCCCCC
LRWPLAPAWLPQYWQENLRLVGPLLVIWLLSFVLPVVLSAPLNQISILTGFPLGYYMSAQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCHHEEECCC
GTLICFVVLIFVYNWRMHILDRRYGVDPPETPDAQQIRRRYSLRYLGFTIGLLVLLIVFI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILETQFRLPSFLIDWSFLALTIGLYAVIGIRSRADTLDAYYVAERKVPGILNGLATGSDW
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCHHH
MSAASFISMAGALYLLGFEGLAYITGWTGGYVLLVLLLAPYLRKFGQYTLVDFIGARYPG
HHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
AGARVIAAVLSIIICFTYVTAQVTGIGIIMSRFLGLNYMVGVIVGLAAVLLCSYLGGMKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
ITWTQGVQGIILVFAYLVPVTWLAFKLTGVALPQVMYGEALSNIDRLEQAQGLASYVAPF
EHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NDWSIWNYLALSLCLMLGTAGMPHILVRFYTVPTVRDSRSSVAWALVWICVLYLTAPAYA
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AFSRWEILSSVVGRPVAGLPEWTSRWASTGLLKIADAPEVGGNGDGILQYHELQIDQDLV
HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEEECCCCEE
VLSTPEIAELPSTVVALVAAGGMAAALSTADGLLMVIASATVHDIYHRTLNPRASSRERL
EECCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LLGRLAILVVAILAALTALQRLAIIVQLVAWAFSFAAATIFPVLVLGIFWKRTNSRGAVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
GMISGFLVTASYMAITYILPEWTLFGISSSAAGIFGLPVNFLVTWLVSRYGPPPDPEVTA
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEECCCHHHHHHHHHHHCCCCCCCHHHH
LVDYVRYP
HHHHHCCC
>Mature Secondary Structure 
SAQFWLGLFQLFLVVGGALAVSLFIIDRLFPPVRQTTGSDTANVRRLRIGPASTAVPPP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEECCCCCCCCCC
LRWPLAPAWLPQYWQENLRLVGPLLVIWLLSFVLPVVLSAPLNQISILTGFPLGYYMSAQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCHHEEECCC
GTLICFVVLIFVYNWRMHILDRRYGVDPPETPDAQQIRRRYSLRYLGFTIGLLVLLIVFI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILETQFRLPSFLIDWSFLALTIGLYAVIGIRSRADTLDAYYVAERKVPGILNGLATGSDW
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCHHH
MSAASFISMAGALYLLGFEGLAYITGWTGGYVLLVLLLAPYLRKFGQYTLVDFIGARYPG
HHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
AGARVIAAVLSIIICFTYVTAQVTGIGIIMSRFLGLNYMVGVIVGLAAVLLCSYLGGMKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
ITWTQGVQGIILVFAYLVPVTWLAFKLTGVALPQVMYGEALSNIDRLEQAQGLASYVAPF
EHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NDWSIWNYLALSLCLMLGTAGMPHILVRFYTVPTVRDSRSSVAWALVWICVLYLTAPAYA
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AFSRWEILSSVVGRPVAGLPEWTSRWASTGLLKIADAPEVGGNGDGILQYHELQIDQDLV
HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEEECCCCEE
VLSTPEIAELPSTVVALVAAGGMAAALSTADGLLMVIASATVHDIYHRTLNPRASSRERL
EECCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LLGRLAILVVAILAALTALQRLAIIVQLVAWAFSFAAATIFPVLVLGIFWKRTNSRGAVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
GMISGFLVTASYMAITYILPEWTLFGISSSAAGIFGLPVNFLVTWLVSRYGPPPDPEVTA
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEECCCHHHHHHHHHHHCCCCCCCHHHH
LVDYVRYP
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1356967 [H]