| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526861
Identifier: 222526861
GI number: 222526861
Start: 4525896
End: 4526921
Strand: Direct
Name: 222526861
Synonym: Chy400_3637
Alternate gene names: NA
Gene position: 4525896-4526921 (Clockwise)
Preceding gene: 222526860
Following gene: 222526866
Centisome position: 85.9
GC content: 55.85
Gene sequence:
>1026_bases GTGACGACTCAACGTCCGCGTCGTGGTCGTGGCCGCAAGCGCAGTTCAGCGCTGACCGTCCAGCGTCGGTTGTGGCTGAT CAGCCGTCTTGGGCGGGGAGCGGCCCTTCCTGAAGAGTTGATTGCCGATGCGCGTCGCGTCTTTGGTGAGTCGGTCTACC CATCGAATGCCTTAACTGCGCTTCGTCGCGATTTCCACGCTATTCGTAATGAGTTTCGTTGTACGCTCAAGCGCCAGCTT GATGGCCGGTATGCCCTGACCGATTTTGGCCGTCTGACGTTACTGCATCTGCCGGATGAGGAGATGGAAGCCCTGGCTTT TCTCGTCTCGTTCTTTAGCGAGGGAAGCTGGCCGAACCGGTTGCAGATACGTTCACTCTTAGAGCATATTATTGCCCTGC TACCTGATAAACAACGGCAAACGATCCAGCAACCGATCACGTTTCGGGTTGAATTGCCCCAGAGTAGTACAACCGTTGAT CAGAAATTGCTGATGCGCCTGCAACGGAATCTGCGTCGCCACGCTGTGCAGTTTCAGTACCGCTCGAACTACAGCGATGA GCCTGAGTCGCACCGGGTTGCCCCGATACGGCTGTTTGTTCGCGATGGGCATACGTATCTTGAAGCCTATTGCTACAATT CGTCCCAGCAGGTAACGATTGGGCAATACATAACCTATCGCGTTGATCGGATCATTCCCGGCACACTCCAGGTTGAACGA CGGGCCTTACCACCAGAGCTGCCACCACGCCGGATGTGGTCAATTCGCTACCGCCTTTCACCGCAGGTTGCACGTAATCG GGATATTTCGCTGTGGTTTTCGCAAAGCACGGTGACATATCTTGAAGATGGCAGCGCAGAGGTGTCGGCTCAGACCGGCG ATCTCTGGCAGGCTGAACAGATCCTCCTGCGCTATCGCGATCATTGTCAGGTGCTCGAACCGCCAGAGTTGATCGAGCAG ATGCGGCAAACTATCGAGCGCATGCGGCTGTTATACGCGCAGGATCAGCCGGTGCACAAGGGATGA
Upstream 100 bases:
>100_bases AGCTATAGCGAACGGTATTTCCGTGTCGATGCACAATCTGGCAACTCCAGGTATATAATACGCCCAAGGAACCGCTGCCC TGTTTTAACGAGGTGTCACT
Downstream 100 bases:
>100_bases GACAGACATCACGTGCCGTTCACTAACGCCAGAAAAAGGCCAGGTAGAAGAGCGCAATGATAATCATACTTGCCACCACG AGCACGGTCAGATACCGTCT
Product: transcriptional regulator-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MTTQRPRRGRGRKRSSALTVQRRLWLISRLGRGAALPEELIADARRVFGESVYPSNALTALRRDFHAIRNEFRCTLKRQL DGRYALTDFGRLTLLHLPDEEMEALAFLVSFFSEGSWPNRLQIRSLLEHIIALLPDKQRQTIQQPITFRVELPQSSTTVD QKLLMRLQRNLRRHAVQFQYRSNYSDEPESHRVAPIRLFVRDGHTYLEAYCYNSSQQVTIGQYITYRVDRIIPGTLQVER RALPPELPPRRMWSIRYRLSPQVARNRDISLWFSQSTVTYLEDGSAEVSAQTGDLWQAEQILLRYRDHCQVLEPPELIEQ MRQTIERMRLLYAQDQPVHKG
Sequences:
>Translated_341_residues MTTQRPRRGRGRKRSSALTVQRRLWLISRLGRGAALPEELIADARRVFGESVYPSNALTALRRDFHAIRNEFRCTLKRQL DGRYALTDFGRLTLLHLPDEEMEALAFLVSFFSEGSWPNRLQIRSLLEHIIALLPDKQRQTIQQPITFRVELPQSSTTVD QKLLMRLQRNLRRHAVQFQYRSNYSDEPESHRVAPIRLFVRDGHTYLEAYCYNSSQQVTIGQYITYRVDRIIPGTLQVER RALPPELPPRRMWSIRYRLSPQVARNRDISLWFSQSTVTYLEDGSAEVSAQTGDLWQAEQILLRYRDHCQVLEPPELIEQ MRQTIERMRLLYAQDQPVHKG >Mature_340_residues TTQRPRRGRGRKRSSALTVQRRLWLISRLGRGAALPEELIADARRVFGESVYPSNALTALRRDFHAIRNEFRCTLKRQLD GRYALTDFGRLTLLHLPDEEMEALAFLVSFFSEGSWPNRLQIRSLLEHIIALLPDKQRQTIQQPITFRVELPQSSTTVDQ KLLMRLQRNLRRHAVQFQYRSNYSDEPESHRVAPIRLFVRDGHTYLEAYCYNSSQQVTIGQYITYRVDRIIPGTLQVERR ALPPELPPRRMWSIRYRLSPQVARNRDISLWFSQSTVTYLEDGSAEVSAQTGDLWQAEQILLRYRDHCQVLEPPELIEQM RQTIERMRLLYAQDQPVHKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40070; Mature: 39938
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQRPRRGRGRKRSSALTVQRRLWLISRLGRGAALPEELIADARRVFGESVYPSNALTA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH LRRDFHAIRNEFRCTLKRQLDGRYALTDFGRLTLLHLPDEEMEALAFLVSFFSEGSWPNR HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCH LQIRSLLEHIIALLPDKQRQTIQQPITFRVELPQSSTTVDQKLLMRLQRNLRRHAVQFQY HHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH RSNYSDEPESHRVAPIRLFVRDGHTYLEAYCYNSSQQVTIGQYITYRVDRIIPGTLQVER HCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCEEHHHHHHHHHHHCCCCCHHHHH RALPPELPPRRMWSIRYRLSPQVARNRDISLWFSQSTVTYLEDGSAEVSAQTGDLWQAEQ HCCCCCCCCCCEEEEEEECCCHHHCCCCEEEEEECCEEEEEECCCCEEECCCCCHHHHHH ILLRYRDHCQVLEPPELIEQMRQTIERMRLLYAQDQPVHKG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTQRPRRGRGRKRSSALTVQRRLWLISRLGRGAALPEELIADARRVFGESVYPSNALTA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH LRRDFHAIRNEFRCTLKRQLDGRYALTDFGRLTLLHLPDEEMEALAFLVSFFSEGSWPNR HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCH LQIRSLLEHIIALLPDKQRQTIQQPITFRVELPQSSTTVDQKLLMRLQRNLRRHAVQFQY HHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH RSNYSDEPESHRVAPIRLFVRDGHTYLEAYCYNSSQQVTIGQYITYRVDRIIPGTLQVER HCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCEEHHHHHHHHHHHCCCCCHHHHH RALPPELPPRRMWSIRYRLSPQVARNRDISLWFSQSTVTYLEDGSAEVSAQTGDLWQAEQ HCCCCCCCCCCEEEEEEECCCHHHCCCCEEEEEECCEEEEEECCCCEEECCCCCHHHHHH ILLRYRDHCQVLEPPELIEQMRQTIERMRLLYAQDQPVHKG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA