Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222526821

Identifier: 222526821

GI number: 222526821

Start: 4475920

End: 4476462

Strand: Reverse

Name: 222526821

Synonym: Chy400_3596

Alternate gene names: NA

Gene position: 4476462-4475920 (Counterclockwise)

Preceding gene: 222526822

Following gene: 222526820

Centisome position: 84.96

GC content: 65.38

Gene sequence:

>543_bases
ATGGCACAGGCACCATCCGTAGGCTATGCATTACCCATAACGCGAATACTGCATTGCCCGCGTGCCGGAGCGGGTCGGGG
GAGTGATGACGGGCGTGCTCCCCAGCCGGGAGCTGGGAGCGCGCGCCTCCGGCGCGCATGGTGCCGGTACCAGTGCTGGA
GGGAGGAGCCAGGCGCAAGCTCCCGCCCCTGGCGGCATTCACGGACGGCCAGGATAGATGATCGAACGCAACGTCTACCC
TATCAGAAAGCCCTGGATCACACGTCTGCCCTCCCATCACCCGCCCCCGCTATGCATTACCCACAACTGGTGTCAACCAC
ATGCGTATCAGCGGGGATGATCGCCATAGGTGCTGTTGTGGGCGACTGGCCCGATGGCAGAGCGCTGCTCCAGCCGTGCC
GGCACGTGCTGGATGGATTGCTGTACCCGCTCGGCATGCGCGTGTCTCGCAGTTTGGAGTGCGGCAGCCATGCTGCCGCG
CCAGCCGTGCTCACGATCCGGCGCGTGGCATACCGTTCCCCATCCTGGTCACGGGGGTGCTGA

Upstream 100 bases:

>100_bases
CGTAGAGGAATGAGATCACATCTGGATACATCCGATACACTACATGCGATTTAGACATTCTCTTCTCTCATTCACCGCAT
CCCTTGTATAGTTAAGGTTA

Downstream 100 bases:

>100_bases
ATGTGCTCATACCGATCATCGAGTCGGTCCGGCATGCATGCGATACCCCTGCGTGTAGACGGTTATGTTGTAAGAGATTC
GTGCCTGCGCACCAGCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MAQAPSVGYALPITRILHCPRAGAGRGSDDGRAPQPGAGSARLRRAWCRYQCWREEPGASSRPWRHSRTARIDDRTQRLP
YQKALDHTSALPSPAPAMHYPQLVSTTCVSAGMIAIGAVVGDWPDGRALLQPCRHVLDGLLYPLGMRVSRSLECGSHAAA
PAVLTIRRVAYRSPSWSRGC

Sequences:

>Translated_180_residues
MAQAPSVGYALPITRILHCPRAGAGRGSDDGRAPQPGAGSARLRRAWCRYQCWREEPGASSRPWRHSRTARIDDRTQRLP
YQKALDHTSALPSPAPAMHYPQLVSTTCVSAGMIAIGAVVGDWPDGRALLQPCRHVLDGLLYPLGMRVSRSLECGSHAAA
PAVLTIRRVAYRSPSWSRGC
>Mature_179_residues
AQAPSVGYALPITRILHCPRAGAGRGSDDGRAPQPGAGSARLRRAWCRYQCWREEPGASSRPWRHSRTARIDDRTQRLPY
QKALDHTSALPSPAPAMHYPQLVSTTCVSAGMIAIGAVVGDWPDGRALLQPCRHVLDGLLYPLGMRVSRSLECGSHAAAP
AVLTIRRVAYRSPSWSRGC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19563; Mature: 19431

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQAPSVGYALPITRILHCPRAGAGRGSDDGRAPQPGAGSARLRRAWCRYQCWREEPGAS
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
SRPWRHSRTARIDDRTQRLPYQKALDHTSALPSPAPAMHYPQLVSTTCVSAGMIAIGAVV
CCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GDWPDGRALLQPCRHVLDGLLYPLGMRVSRSLECGSHAAAPAVLTIRRVAYRSPSWSRGC
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AQAPSVGYALPITRILHCPRAGAGRGSDDGRAPQPGAGSARLRRAWCRYQCWREEPGAS
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
SRPWRHSRTARIDDRTQRLPYQKALDHTSALPSPAPAMHYPQLVSTTCVSAGMIAIGAVV
CCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GDWPDGRALLQPCRHVLDGLLYPLGMRVSRSLECGSHAAAPAVLTIRRVAYRSPSWSRGC
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA