| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is folD
Identifier: 222526767
GI number: 222526767
Start: 4410885
End: 4411742
Strand: Direct
Name: folD
Synonym: Chy400_3541
Alternate gene names: 222526767
Gene position: 4410885-4411742 (Clockwise)
Preceding gene: 222526766
Following gene: 222526768
Centisome position: 83.71
GC content: 59.67
Gene sequence:
>858_bases ATGAGCGCACGCATCCTCGATGGTAAGGCACTGGCGCAAGAGCTACGGGCCGAAGCCGCAGCCCAGATTGCTGAATTGCG CACTCAGATTGATCGTCCACCTACAATCGCCGTGGTGCAGGTCGGTGATGATCCGGCGGCAACCCGCTATGTGCGGAGCA TTGACCGCCTGTGTCAGTCGTTGGGAGCTGCCTGCCGGGCAATTGCACTTCCGGCAGAAACGGCGCAGGCCGACCTGGAA GCGACCGTGGCGACGCTGAGTGCAGATGATCGGATTGACGGTATCTTACTGCAATTACCGTTACCGGCGGGTTTAACCCT CGATGGTGTGCTAAGCCGGCTTGCCCCGGAAAAGGATCTCGATGGTATTCACCCGATCAACGCCGGCTTGCTGGCGCAGG GGCGGCCAACCCTCACACCCAACACCCCGGCTGGTGGCATTGAACTCATGCGGCGTTATGGTATCGACATTCGCGGGCGG CGTGCCGCAGTGGTTGGCCGCTCGGCAATTGTTGGTCGACCTATGGCCCTCCTGCTACTACAAGCCGATGCGACAGTGAC AATCTGTCATTCCCGGACACCCGATCTCGGTGCAGTTTTGCGCGAGTGCGATATTATCGCTGCGGCTGCCGGTCGTCCTG GTCTGATCACTGCCGATATGGTCAAACCCGGTGCAACCGTAATCGACTTCGGTACCAATGTGTTAGCCGATGGAAGTATG GTTGGCGATGTCGATTTTGCTGCCGTGGCCGAGGTGGCCGGGGCAATTACGCCGGTACCCGGTGGTACCGGGCCGGTGAC CAACATCATGTTGATGCGGAATCTGATCACGGCAACGCGCACTCGTCTCGGCATCTAA
Upstream 100 bases:
>100_bases TGTTCGTGCGCGAGACACGGGCGCAGTTGCAAGACCTGCTGATCGGACTTGGTGATGAAGTTGATGGTATCGTCACCATT GTTCGGGGAAGGATGGCGGG
Downstream 100 bases:
>100_bases CCACCTGTAGCTACTCACGAGCAAGGACGAGACATATAGGTTGGCGTGCGAGGTGACAATCTCGCACGTAACAAATCACT CTGGCCGTCAGGTGTTACCA
Product: methenyltetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSARILDGKALAQELRAEAAAQIAELRTQIDRPPTIAVVQVGDDPAATRYVRSIDRLCQSLGAACRAIALPAETAQADLE ATVATLSADDRIDGILLQLPLPAGLTLDGVLSRLAPEKDLDGIHPINAGLLAQGRPTLTPNTPAGGIELMRRYGIDIRGR RAAVVGRSAIVGRPMALLLLQADATVTICHSRTPDLGAVLRECDIIAAAAGRPGLITADMVKPGATVIDFGTNVLADGSM VGDVDFAAVAEVAGAITPVPGGTGPVTNIMLMRNLITATRTRLGI
Sequences:
>Translated_285_residues MSARILDGKALAQELRAEAAAQIAELRTQIDRPPTIAVVQVGDDPAATRYVRSIDRLCQSLGAACRAIALPAETAQADLE ATVATLSADDRIDGILLQLPLPAGLTLDGVLSRLAPEKDLDGIHPINAGLLAQGRPTLTPNTPAGGIELMRRYGIDIRGR RAAVVGRSAIVGRPMALLLLQADATVTICHSRTPDLGAVLRECDIIAAAAGRPGLITADMVKPGATVIDFGTNVLADGSM VGDVDFAAVAEVAGAITPVPGGTGPVTNIMLMRNLITATRTRLGI >Mature_284_residues SARILDGKALAQELRAEAAAQIAELRTQIDRPPTIAVVQVGDDPAATRYVRSIDRLCQSLGAACRAIALPAETAQADLEA TVATLSADDRIDGILLQLPLPAGLTLDGVLSRLAPEKDLDGIHPINAGLLAQGRPTLTPNTPAGGIELMRRYGIDIRGRR AAVVGRSAIVGRPMALLLLQADATVTICHSRTPDLGAVLRECDIIAAAAGRPGLITADMVKPGATVIDFGTNVLADGSMV GDVDFAAVAEVAGAITPVPGGTGPVTNIMLMRNLITATRTRLGI
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=292, Percent_Identity=38.3561643835616, Blast_Score=201, Evalue=5e-52, Organism=Homo sapiens, GI94721354, Length=297, Percent_Identity=39.7306397306397, Blast_Score=201, Evalue=7e-52, Organism=Homo sapiens, GI222418558, Length=294, Percent_Identity=40.1360544217687, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI36796743, Length=206, Percent_Identity=27.1844660194175, Blast_Score=86, Evalue=3e-17, Organism=Escherichia coli, GI1786741, Length=278, Percent_Identity=46.0431654676259, Blast_Score=239, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17568735, Length=296, Percent_Identity=40.5405405405405, Blast_Score=193, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6321643, Length=300, Percent_Identity=38.3333333333333, Blast_Score=204, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6319558, Length=288, Percent_Identity=39.5833333333333, Blast_Score=201, Evalue=9e-53, Organism=Drosophila melanogaster, GI17136816, Length=296, Percent_Identity=42.9054054054054, Blast_Score=216, Evalue=1e-56, Organism=Drosophila melanogaster, GI17136818, Length=296, Percent_Identity=42.9054054054054, Blast_Score=216, Evalue=1e-56, Organism=Drosophila melanogaster, GI62472483, Length=284, Percent_Identity=39.7887323943662, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI45551871, Length=284, Percent_Identity=39.7887323943662, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI24645718, Length=284, Percent_Identity=39.7887323943662, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI17137370, Length=284, Percent_Identity=39.7887323943662, Blast_Score=199, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_CHLAA (A9WJ10)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001636858.1 - ProteinModelPortal: A9WJ10 - SMR: A9WJ10 - GeneID: 5825083 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_3281 - HOGENOM: HBG328751 - OMA: CLMMLRD - ProtClustDB: CLSK975315 - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 29479; Mature: 29347
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARILDGKALAQELRAEAAAQIAELRTQIDRPPTIAVVQVGDDPAATRYVRSIDRLCQS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH LGAACRAIALPAETAQADLEATVATLSADDRIDGILLQLPLPAGLTLDGVLSRLAPEKDL HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCC DGIHPINAGLLAQGRPTLTPNTPAGGIELMRRYGIDIRGRRAAVVGRSAIVGRPMALLLL CCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHCCCCEEEEE QADATVTICHSRTPDLGAVLRECDIIAAAAGRPGLITADMVKPGATVIDFGTNVLADGSM ECCCEEEEECCCCCCHHHHHHHHHEEEECCCCCCEEEHHCCCCCCEEEECCCCEEECCCE VGDVDFAAVAEVAGAITPVPGGTGPVTNIMLMRNLITATRTRLGI ECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SARILDGKALAQELRAEAAAQIAELRTQIDRPPTIAVVQVGDDPAATRYVRSIDRLCQS CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH LGAACRAIALPAETAQADLEATVATLSADDRIDGILLQLPLPAGLTLDGVLSRLAPEKDL HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCC DGIHPINAGLLAQGRPTLTPNTPAGGIELMRRYGIDIRGRRAAVVGRSAIVGRPMALLLL CCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHCCCCEEEEE QADATVTICHSRTPDLGAVLRECDIIAAAAGRPGLITADMVKPGATVIDFGTNVLADGSM ECCCEEEEECCCCCCHHHHHHHHHEEEECCCCCCEEEHHCCCCCCEEEECCCCEEECCCE VGDVDFAAVAEVAGAITPVPGGTGPVTNIMLMRNLITATRTRLGI ECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA