| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526754
Identifier: 222526754
GI number: 222526754
Start: 4390365
End: 4391306
Strand: Direct
Name: 222526754
Synonym: Chy400_3528
Alternate gene names: NA
Gene position: 4390365-4391306 (Clockwise)
Preceding gene: 222526753
Following gene: 222526755
Centisome position: 83.33
GC content: 56.16
Gene sequence:
>942_bases ATGGCTGCTCTCAATTGGCGAGGTATAGGCTGGTTTACTGGATTAGCAATGGGCTTCGCGTGGCTCTGCTGCTTACCACT CTGGCTCAGTGGTCAGGGTCTAAATCATCCGTTAGCGTTTGCACTCATCTTACTAATGATGTTTACGCCATCGCTGGCGA CGCTCATTGTAGTACGCTGGATCAGTCCACCACCGGTTGGTATCGTCAAAGCAACCGGTCTGGGGTTGGGAAAGGGACGG CGATGGGGATGGTACTGGTTGTTTGCCTGGACAGTACCGGCGCTGGTGATGGTCATTTCGCCATTTTTCAGTGCGTTGCT TGGGGTCTACGACCTCGATCTGTCGCTGTCAGGCTTTCGTGAGTTGTTGAACACAGCGGGCGCAGGTGATGCGCTGGCTA ACGTATCACTATGGCCGATTGTGATCACGCAGTTGCTGGTTGCGCTGGCAATTGGCCCGCTGTTAAACGCGATTCCGGTG TTTGGTGAAGAGTGGGGCTGGCGCGGGTATTTGCTACCCCAACTGCTGCCACTTGGTCAATGGCCGGCGCTGATCATCAG TGGCGTCATCTGGGGCTTGTGGCATGCCCCGATTATCCTCCTGGGTTACAACTATCCCACCAATCCGGTGTTGGGTGTAG TGATGATGACGGTCTTCTGTGTGCTGGTGGGTACGCTGCTCGGCTGGACACGACTCGCAACTGGAAGTGTCTGGCCAGCC GTTATCGGTCACGCCGGCTTGAATGCCTTTGGCGGAGTGGTTGCCCTTTTTGCCCGTGCCGGCTCATCAGTCGACACCAT TTGGGCGACGGCCCTGGGCATAACCGGCTGGCCGTTGTGGTTGATGGTCATCGCCATCCTTGTTCTTGCTCGCCGGTTGC CGGTGAGTGATGCGCCTGATAATCCAGGGAGGATGGACATGGTGTCAACAACTGTTAGATAG
Upstream 100 bases:
>100_bases TGATCGTACCGGTGCTGGCAACGATTCCGTATTCGTATGTGGTCTGGCGGCAATTACGGAGTGGTTAAGTATTTGCCGCG AAGAAGAGAAGGAAACGTGA
Downstream 100 bases:
>100_bases TATATTTCTCGCTTTAATTAATTATGGCCACAGAGCAACTCTGTGGTCTTTTTTTTGTGAATTTTTGTATTTTAAACTAA TTTTTGATAAGTAAATAGAT
Product: abortive infection protein
Products: NA
Alternate protein names: Caax Amino Protease Family; Phosphoenolpyruvate Synthase; CAAX Amino Terminal Protease Family; Caax Amino Terminal Protease Family; CAAX Amino Protease; CAAX Amino Terminal Protease Family Protein
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MAALNWRGIGWFTGLAMGFAWLCCLPLWLSGQGLNHPLAFALILLMMFTPSLATLIVVRWISPPPVGIVKATGLGLGKGR RWGWYWLFAWTVPALVMVISPFFSALLGVYDLDLSLSGFRELLNTAGAGDALANVSLWPIVITQLLVALAIGPLLNAIPV FGEEWGWRGYLLPQLLPLGQWPALIISGVIWGLWHAPIILLGYNYPTNPVLGVVMMTVFCVLVGTLLGWTRLATGSVWPA VIGHAGLNAFGGVVALFARAGSSVDTIWATALGITGWPLWLMVIAILVLARRLPVSDAPDNPGRMDMVSTTVR
Sequences:
>Translated_313_residues MAALNWRGIGWFTGLAMGFAWLCCLPLWLSGQGLNHPLAFALILLMMFTPSLATLIVVRWISPPPVGIVKATGLGLGKGR RWGWYWLFAWTVPALVMVISPFFSALLGVYDLDLSLSGFRELLNTAGAGDALANVSLWPIVITQLLVALAIGPLLNAIPV FGEEWGWRGYLLPQLLPLGQWPALIISGVIWGLWHAPIILLGYNYPTNPVLGVVMMTVFCVLVGTLLGWTRLATGSVWPA VIGHAGLNAFGGVVALFARAGSSVDTIWATALGITGWPLWLMVIAILVLARRLPVSDAPDNPGRMDMVSTTVR >Mature_312_residues AALNWRGIGWFTGLAMGFAWLCCLPLWLSGQGLNHPLAFALILLMMFTPSLATLIVVRWISPPPVGIVKATGLGLGKGRR WGWYWLFAWTVPALVMVISPFFSALLGVYDLDLSLSGFRELLNTAGAGDALANVSLWPIVITQLLVALAIGPLLNAIPVF GEEWGWRGYLLPQLLPLGQWPALIISGVIWGLWHAPIILLGYNYPTNPVLGVVMMTVFCVLVGTLLGWTRLATGSVWPAV IGHAGLNAFGGVVALFARAGSSVDTIWATALGITGWPLWLMVIAILVLARRLPVSDAPDNPGRMDMVSTTVR
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33759; Mature: 33628
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALNWRGIGWFTGLAMGFAWLCCLPLWLSGQGLNHPLAFALILLMMFTPSLATLIVVRW CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ISPPPVGIVKATGLGLGKGRRWGWYWLFAWTVPALVMVISPFFSALLGVYDLDLSLSGFR CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ELLNTAGAGDALANVSLWPIVITQLLVALAIGPLLNAIPVFGEEWGWRGYLLPQLLPLGQ HHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCC WPALIISGVIWGLWHAPIILLGYNYPTNPVLGVVMMTVFCVLVGTLLGWTRLATGSVWPA CHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VIGHAGLNAFGGVVALFARAGSSVDTIWATALGITGWPLWLMVIAILVLARRLPVSDAPD HHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC NPGRMDMVSTTVR CCCCCHHHHHCCC >Mature Secondary Structure AALNWRGIGWFTGLAMGFAWLCCLPLWLSGQGLNHPLAFALILLMMFTPSLATLIVVRW CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ISPPPVGIVKATGLGLGKGRRWGWYWLFAWTVPALVMVISPFFSALLGVYDLDLSLSGFR CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ELLNTAGAGDALANVSLWPIVITQLLVALAIGPLLNAIPVFGEEWGWRGYLLPQLLPLGQ HHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCC WPALIISGVIWGLWHAPIILLGYNYPTNPVLGVVMMTVFCVLVGTLLGWTRLATGSVWPA CHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VIGHAGLNAFGGVVALFARAGSSVDTIWATALGITGWPLWLMVIAILVLARRLPVSDAPD HHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC NPGRMDMVSTTVR CCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA