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The map label for this gene is aapJ [H]

Identifier: 222526721

GI number: 222526721

Start: 4350874

End: 4352043

Strand: Direct

Name: aapJ [H]

Synonym: Chy400_3494

Alternate gene names: 222526721

Gene position: 4350874-4352043 (Clockwise)

Preceding gene: 222526720

Following gene: 222526722

Centisome position: 82.58

GC content: 60.34

Gene sequence:

>1170_bases
ATGCGCAAACACATTACTCTGGTTCTGGCAGGTTTACTCAGCCTGGTGCTGGCCGCCTGTGGTGGTCAGGCCCAACAGGC
ACCTACAACAGCGCCGGCTCAGCCGGCAACCTCGGCACCAGAACAGCCGACCGCAGCGCCGGCTCAGCCGGCCCCGACTG
CTGCACCGGCTGCAACTTCAGCTCCGGCAGGTGGCACCACCAATCAGCCGGCTGCCGGTGGTCAGATTGAACGAATTCTC
AGCCGTGGCACGCTGATCTGTGGTGTCAACAATAACCCACTGCCCGGTTTCGCATCGGTCGACTCGGCTGGTGTCTACCG
CGGCTTTGACATCGATTTCTGCCGTGCTGTCGCTGCTGCCCTCTTCGACGATCCGACGAAGGTTGAGTTCCGTCCATTGA
GTGCGCAGGAGCGCTTCACTGCATTGCAGAGCGGTGAGATTGATGTTCTCATCCGCAATAGCACCTGGACCCTGGGCCGT
GATGGAACGCTCGGTCTGGACTGGGCACCGACCACCTTCTACGACGGTCAGGGGATGATGGTACGCAAGGACAGTGGTAT
CGAGACGCTTGAAGACATGGATGGCGCAACCATCTGTGTGCAGACCGGTACCACCACTGAGTTGAACCTGGCCGACCAGT
TCCGTGCCCGTGGTCTGACCTTCACGCCGGTGGTCTTCCCCGATGGCGACGCGACACGCGCTGCGTATGATGCCGGCCAG
TGTGACGGCTTTACGACTGACAAGTCGGGTCTCATCTCCAGCCTGACCCTGCTGACGAATCCGGCCGATCACAAGATTCT
TGACGTGACGATGTCGAAGGAGCCGCTTGGCCCGGCAGTGCGCCAGGGTGATCCGCAGTGGTTCGATGCGGTGCGCTGGA
TCGTCTTCGCCACCTTCCAGGCTGAAGAGTACGGCATTACGTCGCAGAATCTCGATCAATTCCTTGGCAGCGATGTGCCG
GAGATTCGCCGCTTCCTCGGTATCGAAGGTGAGCTGGGTGCCGGTATCGGTCTGCCCAACGATTTTGCCGCTCGTGTGGT
ACGCCACGTCGGGAACTATGCTGAGATTTACAACCGTAATCTCGGCCCCGACACGCCATTCAATCTGCCCCGTGGCCTGA
ATGCGTTGTACACCGAGGGTGGTCTGCTCTACTCTCCGCCCTTCCGCTAA

Upstream 100 bases:

>100_bases
CAGGCAGTGGATCGCCTTATTTCAATGGGACCGCACGGTTTGCAGCACCGGAAGGTCCGGTGTATTCGCGTAACCGTATT
CAGATGATACAGGAGAGGAC

Downstream 100 bases:

>100_bases
GCATCACCTCAACGGCGGAGGAGAAACATCCTCCGCCGTTGCCACCTGAAGGATGCTTCAGGTGTCTGGTTGATTGCCTG
CCATCCTGTCACAACGTTCT

Product: family 3 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MRKHITLVLAGLLSLVLAACGGQAQQAPTTAPAQPATSAPEQPTAAPAQPAPTAAPAATSAPAGGTTNQPAAGGQIERIL
SRGTLICGVNNNPLPGFASVDSAGVYRGFDIDFCRAVAAALFDDPTKVEFRPLSAQERFTALQSGEIDVLIRNSTWTLGR
DGTLGLDWAPTTFYDGQGMMVRKDSGIETLEDMDGATICVQTGTTTELNLADQFRARGLTFTPVVFPDGDATRAAYDAGQ
CDGFTTDKSGLISSLTLLTNPADHKILDVTMSKEPLGPAVRQGDPQWFDAVRWIVFATFQAEEYGITSQNLDQFLGSDVP
EIRRFLGIEGELGAGIGLPNDFAARVVRHVGNYAEIYNRNLGPDTPFNLPRGLNALYTEGGLLYSPPFR

Sequences:

>Translated_389_residues
MRKHITLVLAGLLSLVLAACGGQAQQAPTTAPAQPATSAPEQPTAAPAQPAPTAAPAATSAPAGGTTNQPAAGGQIERIL
SRGTLICGVNNNPLPGFASVDSAGVYRGFDIDFCRAVAAALFDDPTKVEFRPLSAQERFTALQSGEIDVLIRNSTWTLGR
DGTLGLDWAPTTFYDGQGMMVRKDSGIETLEDMDGATICVQTGTTTELNLADQFRARGLTFTPVVFPDGDATRAAYDAGQ
CDGFTTDKSGLISSLTLLTNPADHKILDVTMSKEPLGPAVRQGDPQWFDAVRWIVFATFQAEEYGITSQNLDQFLGSDVP
EIRRFLGIEGELGAGIGLPNDFAARVVRHVGNYAEIYNRNLGPDTPFNLPRGLNALYTEGGLLYSPPFR
>Mature_389_residues
MRKHITLVLAGLLSLVLAACGGQAQQAPTTAPAQPATSAPEQPTAAPAQPAPTAAPAATSAPAGGTTNQPAAGGQIERIL
SRGTLICGVNNNPLPGFASVDSAGVYRGFDIDFCRAVAAALFDDPTKVEFRPLSAQERFTALQSGEIDVLIRNSTWTLGR
DGTLGLDWAPTTFYDGQGMMVRKDSGIETLEDMDGATICVQTGTTTELNLADQFRARGLTFTPVVFPDGDATRAAYDAGQ
CDGFTTDKSGLISSLTLLTNPADHKILDVTMSKEPLGPAVRQGDPQWFDAVRWIVFATFQAEEYGITSQNLDQFLGSDVP
EIRRFLGIEGELGAGIGLPNDFAARVVRHVGNYAEIYNRNLGPDTPFNLPRGLNALYTEGGLLYSPPFR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=278, Percent_Identity=21.9424460431655, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 41295; Mature: 41295

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKHITLVLAGLLSLVLAACGGQAQQAPTTAPAQPATSAPEQPTAAPAQPAPTAAPAATS
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APAGGTTNQPAAGGQIERILSRGTLICGVNNNPLPGFASVDSAGVYRGFDIDFCRAVAAA
CCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LFDDPTKVEFRPLSAQERFTALQSGEIDVLIRNSTWTLGRDGTLGLDWAPTTFYDGQGMM
HHCCCCCEEEEECCHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCCCCCCEEECCCCEE
VRKDSGIETLEDMDGATICVQTGTTTELNLADQFRARGLTFTPVVFPDGDATRAAYDAGQ
EECCCCCCHHHHCCCCEEEEECCCCCEECHHHHHHHCCCEEEEEEECCCCCCHHHCCCCC
CDGFTTDKSGLISSLTLLTNPADHKILDVTMSKEPLGPAVRQGDPQWFDAVRWIVFATFQ
CCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHEEEE
AEEYGITSQNLDQFLGSDVPEIRRFLGIEGELGAGIGLPNDFAARVVRHVGNYAEIYNRN
HHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCC
LGPDTPFNLPRGLNALYTEGGLLYSPPFR
CCCCCCCCCCCCCCHHCCCCCEEECCCCC
>Mature Secondary Structure
MRKHITLVLAGLLSLVLAACGGQAQQAPTTAPAQPATSAPEQPTAAPAQPAPTAAPAATS
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APAGGTTNQPAAGGQIERILSRGTLICGVNNNPLPGFASVDSAGVYRGFDIDFCRAVAAA
CCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LFDDPTKVEFRPLSAQERFTALQSGEIDVLIRNSTWTLGRDGTLGLDWAPTTFYDGQGMM
HHCCCCCEEEEECCHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCCCCCCEEECCCCEE
VRKDSGIETLEDMDGATICVQTGTTTELNLADQFRARGLTFTPVVFPDGDATRAAYDAGQ
EECCCCCCHHHHCCCCEEEEECCCCCEECHHHHHHHCCCEEEEEEECCCCCCHHHCCCCC
CDGFTTDKSGLISSLTLLTNPADHKILDVTMSKEPLGPAVRQGDPQWFDAVRWIVFATFQ
CCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHEEEE
AEEYGITSQNLDQFLGSDVPEIRRFLGIEGELGAGIGLPNDFAARVVRHVGNYAEIYNRN
HHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCC
LGPDTPFNLPRGLNALYTEGGLLYSPPFR
CCCCCCCCCCCCCCHHCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]