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The map label for this gene is scpA [H]

Identifier: 222526713

GI number: 222526713

Start: 4343091

End: 4343837

Strand: Direct

Name: scpA [H]

Synonym: Chy400_3484

Alternate gene names: 222526713

Gene position: 4343091-4343837 (Clockwise)

Preceding gene: 222526712

Following gene: 222526714

Centisome position: 82.43

GC content: 58.63

Gene sequence:

>747_bases
ATGCCTTACGCCGTCACCTTACCAGAGTTCACCGGCCCTCTCGATCTGCTGTTGCGTCTGATCGAACGGGCCGAACTGGA
TATCACGACCATCGCCCTGGCCAGTGTCGCCGACCAGTACCTGGCCCACGTCCGTACATTAGAAGAGGTTGAACCGCGTG
AACTGGCTGAGTTTGTGAGTATGGCAGCGCGGTTGATTCTGATCAAGTCACGAGCGCTGTTGCCCCGTTCACCAACTACA
CCTGCTGAGGCAGGTGACGAGGACGCAGGACAGCTTGTGGCCCAGTTGGAGTTGTACCGCCGTTTCAAACAGGCTGCCGA
AGTCCTGCGCCGCTGGCAGGATCAGGGCCGGAGCACGTTTGTCCGTCTGGCCCCACCGCCGCTCCTCCCTGCTCCTGCCC
CCATCAGCTATCGTATTACCGATCTGCTCCACGCGCTTGAACGTCGGCGTCAGCTCCAGTTGCCACTGGCTCAGCCTGAA
CCGATTGTACTCGCGCCACGATTGACGGTCGCCGAAGTGGCGGAGCGGATTCGTGCGCGGTTGGAACGAACGGCCTGGTT
TGATTTTACCGATCTGCTGAGTAATGACCCAACGACCGAAGAGGTGATCGTCTCGTTTTGGGCGATGCTCGAACTGCTCA
AGCGACGGGCGATTGTTGTCGAACAGACAATGCTATTCGGACCTATTCTCATCGGGCGAGGAACGGCACCCATTGTCACC
GAACCGGCTGACGAAGATGAGTTGTAA

Upstream 100 bases:

>100_bases
TTGTCCACCGGAAATTGTTGAAACCATACGTCATTACCATGATCCCAACCCCCGTGGTCGTGCTGCCCGCCTGCAGTGGG
CCGATGAACAAAACTGATCT

Downstream 100 bases:

>100_bases
TTGCCGGCGGCATATGCGACAATGTGAATGATCATAACGAGGTAATCATGACTGACTCTGCGCATATGGCGGCTGATTCT
ACTCATCGCACGCTTCCGTT

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MPYAVTLPEFTGPLDLLLRLIERAELDITTIALASVADQYLAHVRTLEEVEPRELAEFVSMAARLILIKSRALLPRSPTT
PAEAGDEDAGQLVAQLELYRRFKQAAEVLRRWQDQGRSTFVRLAPPPLLPAPAPISYRITDLLHALERRRQLQLPLAQPE
PIVLAPRLTVAEVAERIRARLERTAWFDFTDLLSNDPTTEEVIVSFWAMLELLKRRAIVVEQTMLFGPILIGRGTAPIVT
EPADEDEL

Sequences:

>Translated_248_residues
MPYAVTLPEFTGPLDLLLRLIERAELDITTIALASVADQYLAHVRTLEEVEPRELAEFVSMAARLILIKSRALLPRSPTT
PAEAGDEDAGQLVAQLELYRRFKQAAEVLRRWQDQGRSTFVRLAPPPLLPAPAPISYRITDLLHALERRRQLQLPLAQPE
PIVLAPRLTVAEVAERIRARLERTAWFDFTDLLSNDPTTEEVIVSFWAMLELLKRRAIVVEQTMLFGPILIGRGTAPIVT
EPADEDEL
>Mature_247_residues
PYAVTLPEFTGPLDLLLRLIERAELDITTIALASVADQYLAHVRTLEEVEPRELAEFVSMAARLILIKSRALLPRSPTTP
AEAGDEDAGQLVAQLELYRRFKQAAEVLRRWQDQGRSTFVRLAPPPLLPAPAPISYRITDLLHALERRRQLQLPLAQPEP
IVLAPRLTVAEVAERIRARLERTAWFDFTDLLSNDPTTEEVIVSFWAMLELLKRRAIVVEQTMLFGPILIGRGTAPIVTE
PADEDEL

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023093
- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 27941; Mature: 27810

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYAVTLPEFTGPLDLLLRLIERAELDITTIALASVADQYLAHVRTLEEVEPRELAEFVS
CCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MAARLILIKSRALLPRSPTTPAEAGDEDAGQLVAQLELYRRFKQAAEVLRRWQDQGRSTF
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VRLAPPPLLPAPAPISYRITDLLHALERRRQLQLPLAQPEPIVLAPRLTVAEVAERIRAR
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHH
LERTAWFDFTDLLSNDPTTEEVIVSFWAMLELLKRRAIVVEQTMLFGPILIGRGTAPIVT
HHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
EPADEDEL
CCCCCCCC
>Mature Secondary Structure 
PYAVTLPEFTGPLDLLLRLIERAELDITTIALASVADQYLAHVRTLEEVEPRELAEFVS
CCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MAARLILIKSRALLPRSPTTPAEAGDEDAGQLVAQLELYRRFKQAAEVLRRWQDQGRSTF
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VRLAPPPLLPAPAPISYRITDLLHALERRRQLQLPLAQPEPIVLAPRLTVAEVAERIRAR
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHH
LERTAWFDFTDLLSNDPTTEEVIVSFWAMLELLKRRAIVVEQTMLFGPILIGRGTAPIVT
HHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
EPADEDEL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]