Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222526699

Identifier: 222526699

GI number: 222526699

Start: 4324395

End: 4325417

Strand: Reverse

Name: 222526699

Synonym: Chy400_3470

Alternate gene names: NA

Gene position: 4325417-4324395 (Counterclockwise)

Preceding gene: 222526700

Following gene: 222526698

Centisome position: 82.09

GC content: 62.37

Gene sequence:

>1023_bases
ATGCTTACCCACGCGAGCTACGTTCACGCTCAACGACGAAACGCCACCCAGGGCGGAGATATCTCCCTACGACGCGCCGG
GCAATCTGATGAGCAAAACTGGGGTGGGAGCAGACACCCACGGCGCCAACGGAAACGACGGAGGCACGTCCCAGACCATC
CTCCTGAGGCGCGGTGCGCAGCGGGGGTATCGGTCAGACTGCGTTCACCTGCGTTCACCGACACCGGACAGCACCTGGAT
GCCAGGGGGTTGCTGGAGTATCATGCCCGGTACGATGATCCGGCTAGCGGGCAGTTCATTACGCCGGACAGCAGCGTCGT
CGGCGCGGGGCCGCTCACCGTCTGGCCGAGCGATGCAACGGCGCAGGGGATGGGGCGCAGCGCCGGCAGCGGCCCGGTCA
ACCCGCAGGACCTGAACCGCTCCGCCGATGCGCTGAACCATCCACTGACATACACCGACCCGACGGGGCATTGGGTTGAG
ACGGCGTGGGACCTTGCCAATCTGGTCCTGAGCGCCGCTGCCGTCTGGCAACATCCCAGCGACCCCTGGAATTGGGCCGC
GCTCGCTGCCGACACCGCATCCACCGTGCTGCCCGTCGTTCCTGGCGGCGGAGGGGCACTGATCCGCGCCGCAGCCCACG
CCGATGAGGCGGCGGGGGCGGCGCAGGCGGCGGCGCGGGGTGGGGGGGTAGTTGCAGCGGCTGTACCGCAAGCCGGGCAA
CTGCACAAGAATGCCAACGATGTCACAAAGCGGCCAAGTGGCTTCAGAAAGGGAGTACGTGAAGCAGTTGAATCCAAAGC
TACGCGAAATGAGGAAGGTGAAATGATCTGTCCGACTTGCGGACGAACAATGACGAAACCAGATCTGGACCACACCCCAC
CTTGGAGAGATAGAGTTGCAAGAATGTTCGGTTGGACACGTAAGCAGGTGCTAGATGAATACAATGACGTCACAAAATTG
AGGGCTCAATGTCCATCCTGCAATCGCAGTAGGAAGTTTGAACAAGGAGCATCGTATGAATGA

Upstream 100 bases:

>100_bases
TGGAGCGTGCGCCTGGGCGCACGTGCGCCACGCCTAGGGCGGTCGCCGCTGCGCCCACGTCCGAGGCGAGAGTGGGAGCA
GTGCCCTGGCGATACAGGCA

Downstream 100 bases:

>100_bases
GAAGTCATTGGGCTTATGCTATTTTGACCATTTCGTTCTTCACCTGGGTGCAAATCCCATCGATCACCATGTATTTTGTC
CGGAAGATGAGAAGGCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Filamentous Hemagglutinin Family Outer Membrane Protein; YD Repeat-/RHS Repeat-Containing Protein; Filamentous Haemagglutinin Outer Membrane Protein

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MLTHASYVHAQRRNATQGGDISLRRAGQSDEQNWGGSRHPRRQRKRRRHVPDHPPEARCAAGVSVRLRSPAFTDTGQHLD
ARGLLEYHARYDDPASGQFITPDSSVVGAGPLTVWPSDATAQGMGRSAGSGPVNPQDLNRSADALNHPLTYTDPTGHWVE
TAWDLANLVLSAAAVWQHPSDPWNWAALAADTASTVLPVVPGGGGALIRAAAHADEAAGAAQAAARGGGVVAAAVPQAGQ
LHKNANDVTKRPSGFRKGVREAVESKATRNEEGEMICPTCGRTMTKPDLDHTPPWRDRVARMFGWTRKQVLDEYNDVTKL
RAQCPSCNRSRKFEQGASYE

Sequences:

>Translated_340_residues
MLTHASYVHAQRRNATQGGDISLRRAGQSDEQNWGGSRHPRRQRKRRRHVPDHPPEARCAAGVSVRLRSPAFTDTGQHLD
ARGLLEYHARYDDPASGQFITPDSSVVGAGPLTVWPSDATAQGMGRSAGSGPVNPQDLNRSADALNHPLTYTDPTGHWVE
TAWDLANLVLSAAAVWQHPSDPWNWAALAADTASTVLPVVPGGGGALIRAAAHADEAAGAAQAAARGGGVVAAAVPQAGQ
LHKNANDVTKRPSGFRKGVREAVESKATRNEEGEMICPTCGRTMTKPDLDHTPPWRDRVARMFGWTRKQVLDEYNDVTKL
RAQCPSCNRSRKFEQGASYE
>Mature_340_residues
MLTHASYVHAQRRNATQGGDISLRRAGQSDEQNWGGSRHPRRQRKRRRHVPDHPPEARCAAGVSVRLRSPAFTDTGQHLD
ARGLLEYHARYDDPASGQFITPDSSVVGAGPLTVWPSDATAQGMGRSAGSGPVNPQDLNRSADALNHPLTYTDPTGHWVE
TAWDLANLVLSAAAVWQHPSDPWNWAALAADTASTVLPVVPGGGGALIRAAAHADEAAGAAQAAARGGGVVAAAVPQAGQ
LHKNANDVTKRPSGFRKGVREAVESKATRNEEGEMICPTCGRTMTKPDLDHTPPWRDRVARMFGWTRKQVLDEYNDVTKL
RAQCPSCNRSRKFEQGASYE

Specific function: Unknown

COG id: COG5529

COG function: function code R; Pyocin large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36675; Mature: 36675

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTHASYVHAQRRNATQGGDISLRRAGQSDEQNWGGSRHPRRQRKRRRHVPDHPPEARCA
CCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHH
AGVSVRLRSPAFTDTGQHLDARGLLEYHARYDDPASGQFITPDSSVVGAGPLTVWPSDAT
CCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCEECCCCEEECCCCCH
AQGMGRSAGSGPVNPQDLNRSADALNHPLTYTDPTGHWVETAWDLANLVLSAAAVWQHPS
HHHCCCCCCCCCCCHHHHCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC
DPWNWAALAADTASTVLPVVPGGGGALIRAAAHADEAAGAAQAAARGGGVVAAAVPQAGQ
CCCCCCEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHH
LHKNANDVTKRPSGFRKGVREAVESKATRNEEGEMICPTCGRTMTKPDLDHTPPWRDRVA
HHCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHH
RMFGWTRKQVLDEYNDVTKLRAQCPSCNRSRKFEQGASYE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLTHASYVHAQRRNATQGGDISLRRAGQSDEQNWGGSRHPRRQRKRRRHVPDHPPEARCA
CCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHH
AGVSVRLRSPAFTDTGQHLDARGLLEYHARYDDPASGQFITPDSSVVGAGPLTVWPSDAT
CCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCEECCCCEEECCCCCH
AQGMGRSAGSGPVNPQDLNRSADALNHPLTYTDPTGHWVETAWDLANLVLSAAAVWQHPS
HHHCCCCCCCCCCCHHHHCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC
DPWNWAALAADTASTVLPVVPGGGGALIRAAAHADEAAGAAQAAARGGGVVAAAVPQAGQ
CCCCCCEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHH
LHKNANDVTKRPSGFRKGVREAVESKATRNEEGEMICPTCGRTMTKPDLDHTPPWRDRVA
HHCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHH
RMFGWTRKQVLDEYNDVTKLRAQCPSCNRSRKFEQGASYE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA