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The map label for this gene is smf [H]

Identifier: 222526691

GI number: 222526691

Start: 4316789

End: 4317874

Strand: Direct

Name: smf [H]

Synonym: Chy400_3461

Alternate gene names: 222526691

Gene position: 4316789-4317874 (Clockwise)

Preceding gene: 222526689

Following gene: 222526697

Centisome position: 81.93

GC content: 58.38

Gene sequence:

>1086_bases
ATGGATGATATTGTCCGCTACTACCTCGGTTTCAATCTGGTACCCGGTATTGGCCCGTTGCGGCTGGCCCGCCTGATCGA
ACGTTGTGGCTCGATTGCTGAGGCGTGGTACGCCGATGAAGCGGCGATGGTTGCTGCCGGCCTTGATGCGCGTAGTATGG
CCGGTTTGCGTGCAGTTCGCGAGAGCATCGATCTCGATGCTGAGCTGGCACGGGTTCGGACTGCCGGCATTACGCCGGTG
GCAGTCGTTGATCCACTCTATCCACCTTTGCTGCGCATGACTCCGGCACCTCCGCCACTGCTCTATCTGCGCGGCACGCT
TACGCCTGCCGATCAGCGGGCGGTCGCGATTGTTGGTACGCGCCATCCCAGTCATTATGGACGTGAAGTAGCACGACGCC
TGGCCCGTGATCTGGCGACTGCGGGAGTGACGATTGTCAGTGGTCTGGCTTTAGGCATTGACACAATTGCCCACACTGCC
GCACTGGAGGCTGGTGGCCGCACAATTGCCGTGCTGGCCAGTGGGGTTGATCGGATCTATCCTGAACGCAACCATGCTCT
GGCCGGGCAGATCATTGCATCGGGAGCATTGTTAAGCGATTATCCACCGGGCACCCCGCCGGCACCCCTCAATTTTCCGC
CGCGCAACCGTATTATCTCCGGGCTGAGTCTGGCAACGATAGTAGTTGAAGCAGGTGCGAACAGCGGTGCCCTTATCACT
GTCCAGTTTGCTCTCGATCAAGGACGCGAGGTGATGGCCGTCCCCGGATCAATTTTTAGTCCGTTGAGTGTTGGCCCGCA
TCGCCTGATCCGTGATGGGGCAGTCATTGTTACCAGCGCCGATGATGTGCTGGCAGCACTCAATCTCGATCAATGTGGAG
AGGCGTTTGAACCGTCGTTAGAACTTGCGCTGACTGCGGAAGAAGAAGCGATCTATGCCGTGGTTGAAGCAGAACCGCAG
CATATCGATGTTATCGGTCGTGCTGCCGGTCAATCCGCAGCGGCGACAGCAGCAGCACTGGCTTTGTTAGAGTTGAAAGG
ATTGGTGCGGCAGGTAGCCCCGCTCTACTACGCACGGGGCAGATAA

Upstream 100 bases:

>100_bases
ATCACGTATCGCAATTTTTTTCATGATGCCACAAGTCGCGCACCTTTTGCGGGTCAAAACCGGTTCTATTAATAGGAAAT
CTGTCCAGAGGATTTGATGT

Downstream 100 bases:

>100_bases
CCCGCCTGACAGTATGTTCTAAAAGTCAAAAGCCGCCTCTGGCCGGTTTGCGAACGCATCGGCCAGCATTCGGCGGGTGC
GGGTGAGCAGTGGTGGCAGA

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MDDIVRYYLGFNLVPGIGPLRLARLIERCGSIAEAWYADEAAMVAAGLDARSMAGLRAVRESIDLDAELARVRTAGITPV
AVVDPLYPPLLRMTPAPPPLLYLRGTLTPADQRAVAIVGTRHPSHYGREVARRLARDLATAGVTIVSGLALGIDTIAHTA
ALEAGGRTIAVLASGVDRIYPERNHALAGQIIASGALLSDYPPGTPPAPLNFPPRNRIISGLSLATIVVEAGANSGALIT
VQFALDQGREVMAVPGSIFSPLSVGPHRLIRDGAVIVTSADDVLAALNLDQCGEAFEPSLELALTAEEEAIYAVVEAEPQ
HIDVIGRAAGQSAAATAAALALLELKGLVRQVAPLYYARGR

Sequences:

>Translated_361_residues
MDDIVRYYLGFNLVPGIGPLRLARLIERCGSIAEAWYADEAAMVAAGLDARSMAGLRAVRESIDLDAELARVRTAGITPV
AVVDPLYPPLLRMTPAPPPLLYLRGTLTPADQRAVAIVGTRHPSHYGREVARRLARDLATAGVTIVSGLALGIDTIAHTA
ALEAGGRTIAVLASGVDRIYPERNHALAGQIIASGALLSDYPPGTPPAPLNFPPRNRIISGLSLATIVVEAGANSGALIT
VQFALDQGREVMAVPGSIFSPLSVGPHRLIRDGAVIVTSADDVLAALNLDQCGEAFEPSLELALTAEEEAIYAVVEAEPQ
HIDVIGRAAGQSAAATAAALALLELKGLVRQVAPLYYARGR
>Mature_361_residues
MDDIVRYYLGFNLVPGIGPLRLARLIERCGSIAEAWYADEAAMVAAGLDARSMAGLRAVRESIDLDAELARVRTAGITPV
AVVDPLYPPLLRMTPAPPPLLYLRGTLTPADQRAVAIVGTRHPSHYGREVARRLARDLATAGVTIVSGLALGIDTIAHTA
ALEAGGRTIAVLASGVDRIYPERNHALAGQIIASGALLSDYPPGTPPAPLNFPPRNRIISGLSLATIVVEAGANSGALIT
VQFALDQGREVMAVPGSIFSPLSVGPHRLIRDGAVIVTSADDVLAALNLDQCGEAFEPSLELALTAEEEAIYAVVEAEPQ
HIDVIGRAAGQSAAATAAALALLELKGLVRQVAPLYYARGR

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=285, Percent_Identity=43.1578947368421, Blast_Score=185, Evalue=4e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 37782; Mature: 37782

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDIVRYYLGFNLVPGIGPLRLARLIERCGSIAEAWYADEAAMVAAGLDARSMAGLRAVR
CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCHHHHHHHHHHH
ESIDLDAELARVRTAGITPVAVVDPLYPPLLRMTPAPPPLLYLRGTLTPADQRAVAIVGT
HHCCCCHHHHHHHHCCCCCEEHHCCCCCHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEC
RHPSHYGREVARRLARDLATAGVTIVSGLALGIDTIAHTAALEAGGRTIAVLASGVDRIY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHC
PERNHALAGQIIASGALLSDYPPGTPPAPLNFPPRNRIISGLSLATIVVEAGANSGALIT
CCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCEEE
VQFALDQGREVMAVPGSIFSPLSVGPHRLIRDGAVIVTSADDVLAALNLDQCGEAFEPSL
EEEEECCCCEEEECCCCCCCCCCCCHHHHHHCCEEEEEECCHHHHHCCHHHCCHHCCCCE
ELALTAEEEAIYAVVEAEPQHIDVIGRAAGQSAAATAAALALLELKGLVRQVAPLYYARG
EEEEEECCCEEEEEEECCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
R
C
>Mature Secondary Structure
MDDIVRYYLGFNLVPGIGPLRLARLIERCGSIAEAWYADEAAMVAAGLDARSMAGLRAVR
CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCHHHHHHHHHHH
ESIDLDAELARVRTAGITPVAVVDPLYPPLLRMTPAPPPLLYLRGTLTPADQRAVAIVGT
HHCCCCHHHHHHHHCCCCCEEHHCCCCCHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEC
RHPSHYGREVARRLARDLATAGVTIVSGLALGIDTIAHTAALEAGGRTIAVLASGVDRIY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHC
PERNHALAGQIIASGALLSDYPPGTPPAPLNFPPRNRIISGLSLATIVVEAGANSGALIT
CCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCEEE
VQFALDQGREVMAVPGSIFSPLSVGPHRLIRDGAVIVTSADDVLAALNLDQCGEAFEPSL
EEEEECCCCEEEECCCCCCCCCCCCHHHHHHCCEEEEEECCHHHHHCCHHHCCHHCCCCE
ELALTAEEEAIYAVVEAEPQHIDVIGRAAGQSAAATAAALALLELKGLVRQVAPLYYARG
EEEEEECCCEEEEEEECCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]