| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526672
Identifier: 222526672
GI number: 222526672
Start: 4289570
End: 4290925
Strand: Reverse
Name: 222526672
Synonym: Chy400_3441
Alternate gene names: NA
Gene position: 4290925-4289570 (Counterclockwise)
Preceding gene: 222526679
Following gene: 222526671
Centisome position: 81.44
GC content: 61.5
Gene sequence:
>1356_bases ATGAACGATCTACACGCGCTCCTGGCCCGTCGTGTTGCGGAAGGGCGACCGTTACGGGTAGGTCTGATTGGCGCCGGCAA ATTTGGCACCATGTTTCTGGCCCAGGCGCGACGGGTGAAGGGACTACACGTCGTCGGCGTCGCAGACCTGGCGCCGGAAC GGGCGCGGCTGGCATTAGAGCGCGCCGGTTGGCCAAAGGAGCAGTATGCCGCTCCATCGCTAGCCGCCGCTCTGCAACAC GGCACGACCTTTATTGGCGATGACGCACCTGCTCTGATTGCGGCAGAGGGGATTGAGGTCATTGTTGAAGCAACCGGCGC GCCGGCGGCCGGTGTGGCCCATTGTCTGATGGCAATTGAGCACCACCGCCACATCGTTATGGTCAATGTTGAAGCCGATG CCCTCCTGGGGCCATTCCTTGCCCGCCGCGCTGCCGAGGCAGGCGTGGTCTACTCACTGGCCTACGGCGATCAGCCGGCA TTAATTGCCGAACAGGTCGAATGGGCACGGGCGTGTGGATTCGAGGTGATCTGCGCCGGCAAGGGAACCCGTTATCTACC ACACTATCATCAGAGCACGCCGGAAACGGTCTGGCACTATTACGGCCTCAGTGCCGAACAGGCCGCCGCAGGTGGGATGA ACCCCCAGATGTTCAACTCATTCCTTGACGGCACCAAATCGGCGATTGAGATGGCGGCTGTCGCTAATGCCTGCCTGCTG CGTCCACAACCGCACGGCCTGGCATTTCCACCGTGTGGCGTGGACGATCTCCCTCACGTCTTGCGTCCACGTGAAGCGGG CGGGCAACTCTCACATGCAGGAACGGTCGAGGTTGTCTCGTCGTTAGAGCGTGATGGACGGCCGGTATTTCGTGACCTGC GCTGGGGCGTTTACGTCGTCTTCGCAGCCCCTGACGACTACGTGCGGCGCTGTTTTGCCGAATACGGTCTGGTGACCGAC GCCAGCGGCACGTACAGTGCCCTGTATCGGCCATCCCACCTCATTGGACTGGAATTACCAATCTCCGTATTGCGGGTCGG CTTACGGCAGGAGCCAACCGGATACCCACAGGCATTCCTCGGCGACGTGGTTGCGGTTGCCAAACGCGATCTGATCGAAG GCGAGACCCTTGATGGCGAAGGTGGCTACACTGTCTACGGCAAACTGATGCCGGCAGCCGACTCGGTTGCGCTGGGCGCA CTCCCGATTGGCCTGGCCCACAACATCCGCACCCTTCGCCCCATTCCTGCCGGTGCAGTCGTGCGCTGGGACGATGTTGC CTACGAGACCAATCATCCAACAGTACGACTACGCCGCCTTATGGAGCGCACCATGCTGACGGAGACAAGCCAATGA
Upstream 100 bases:
>100_bases TCCTGCATACTGGCAGTGTACCACAATCTATCGAGTAAAATATGATTTATCGATGAATGTCTGGCAAAAGATACCGGCTG AGTAGCAGATTGAGGAGAAT
Downstream 100 bases:
>100_bases AGATTGCATTAATCGGCCTGGGTTTAATGGGAAGGCCAATGGCGCGTACATTGTTGAAGGCAGGATTCAACGTTACCGGC TGGAATCGCTCACCACTCGA
Product: SAF domain-containing protein
Products: NA
Alternate protein names: SAF Domain Protein; Homoserine Dehydrogenase; NAD(P)-Dependent Oxidoreductase; Dihydrodipicolinate Reductase; Oxidoreductase; Oxidoreductase Domain Protein; Oxidoreductase Domain-Containing Protein; Oxidoreductase-Like; StrU Protein; Saf Domain Protein; SAF Domain Family Protein
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MNDLHALLARRVAEGRPLRVGLIGAGKFGTMFLAQARRVKGLHVVGVADLAPERARLALERAGWPKEQYAAPSLAAALQH GTTFIGDDAPALIAAEGIEVIVEATGAPAAGVAHCLMAIEHHRHIVMVNVEADALLGPFLARRAAEAGVVYSLAYGDQPA LIAEQVEWARACGFEVICAGKGTRYLPHYHQSTPETVWHYYGLSAEQAAAGGMNPQMFNSFLDGTKSAIEMAAVANACLL RPQPHGLAFPPCGVDDLPHVLRPREAGGQLSHAGTVEVVSSLERDGRPVFRDLRWGVYVVFAAPDDYVRRCFAEYGLVTD ASGTYSALYRPSHLIGLELPISVLRVGLRQEPTGYPQAFLGDVVAVAKRDLIEGETLDGEGGYTVYGKLMPAADSVALGA LPIGLAHNIRTLRPIPAGAVVRWDDVAYETNHPTVRLRRLMERTMLTETSQ
Sequences:
>Translated_451_residues MNDLHALLARRVAEGRPLRVGLIGAGKFGTMFLAQARRVKGLHVVGVADLAPERARLALERAGWPKEQYAAPSLAAALQH GTTFIGDDAPALIAAEGIEVIVEATGAPAAGVAHCLMAIEHHRHIVMVNVEADALLGPFLARRAAEAGVVYSLAYGDQPA LIAEQVEWARACGFEVICAGKGTRYLPHYHQSTPETVWHYYGLSAEQAAAGGMNPQMFNSFLDGTKSAIEMAAVANACLL RPQPHGLAFPPCGVDDLPHVLRPREAGGQLSHAGTVEVVSSLERDGRPVFRDLRWGVYVVFAAPDDYVRRCFAEYGLVTD ASGTYSALYRPSHLIGLELPISVLRVGLRQEPTGYPQAFLGDVVAVAKRDLIEGETLDGEGGYTVYGKLMPAADSVALGA LPIGLAHNIRTLRPIPAGAVVRWDDVAYETNHPTVRLRRLMERTMLTETSQ >Mature_451_residues MNDLHALLARRVAEGRPLRVGLIGAGKFGTMFLAQARRVKGLHVVGVADLAPERARLALERAGWPKEQYAAPSLAAALQH GTTFIGDDAPALIAAEGIEVIVEATGAPAAGVAHCLMAIEHHRHIVMVNVEADALLGPFLARRAAEAGVVYSLAYGDQPA LIAEQVEWARACGFEVICAGKGTRYLPHYHQSTPETVWHYYGLSAEQAAAGGMNPQMFNSFLDGTKSAIEMAAVANACLL RPQPHGLAFPPCGVDDLPHVLRPREAGGQLSHAGTVEVVSSLERDGRPVFRDLRWGVYVVFAAPDDYVRRCFAEYGLVTD ASGTYSALYRPSHLIGLELPISVLRVGLRQEPTGYPQAFLGDVVAVAKRDLIEGETLDGEGGYTVYGKLMPAADSVALGA LPIGLAHNIRTLRPIPAGAVVRWDDVAYETNHPTVRLRRLMERTMLTETSQ
Specific function: Unknown
COG id: COG4091
COG function: function code E; Predicted homoserine dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48497; Mature: 48497
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLHALLARRVAEGRPLRVGLIGAGKFGTMFLAQARRVKGLHVVGVADLAPERARLALE CCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEEHHCCCHHHHHHHH RAGWPKEQYAAPSLAAALQHGTTFIGDDAPALIAAEGIEVIVEATGAPAAGVAHCLMAIE HCCCCHHHHCCHHHHHHHHCCCEEECCCCCCEEEECCEEEEEEECCCCHHHHHHHHHHHH HHRHIVMVNVEADALLGPFLARRAAEAGVVYSLAYGDQPALIAEQVEWARACGFEVICAG CCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEECC KGTRYLPHYHQSTPETVWHYYGLSAEQAAAGGMNPQMFNSFLDGTKSAIEMAAVANACLL CCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHC RPQPHGLAFPPCGVDDLPHVLRPREAGGQLSHAGTVEVVSSLERDGRPVFRDLRWGVYVV CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCEEEE FAAPDDYVRRCFAEYGLVTDASGTYSALYRPSHLIGLELPISVLRVGLRQEPTGYPQAFL EECCHHHHHHHHHHHCCEECCCCCHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCCHHHH GDVVAVAKRDLIEGETLDGEGGYTVYGKLMPAADSVALGALPIGLAHNIRTLRPIPAGAV HHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHCCCCHHHHCCCCEECCCCCCCE VRWDDVAYETNHPTVRLRRLMERTMLTETSQ EEECCEEEECCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNDLHALLARRVAEGRPLRVGLIGAGKFGTMFLAQARRVKGLHVVGVADLAPERARLALE CCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEEHHCCCHHHHHHHH RAGWPKEQYAAPSLAAALQHGTTFIGDDAPALIAAEGIEVIVEATGAPAAGVAHCLMAIE HCCCCHHHHCCHHHHHHHHCCCEEECCCCCCEEEECCEEEEEEECCCCHHHHHHHHHHHH HHRHIVMVNVEADALLGPFLARRAAEAGVVYSLAYGDQPALIAEQVEWARACGFEVICAG CCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEECC KGTRYLPHYHQSTPETVWHYYGLSAEQAAAGGMNPQMFNSFLDGTKSAIEMAAVANACLL CCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHC RPQPHGLAFPPCGVDDLPHVLRPREAGGQLSHAGTVEVVSSLERDGRPVFRDLRWGVYVV CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCEEEE FAAPDDYVRRCFAEYGLVTDASGTYSALYRPSHLIGLELPISVLRVGLRQEPTGYPQAFL EECCHHHHHHHHHHHCCEECCCCCHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCCHHHH GDVVAVAKRDLIEGETLDGEGGYTVYGKLMPAADSVALGALPIGLAHNIRTLRPIPAGAV HHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHCCCCHHHHCCCCEECCCCCCCE VRWDDVAYETNHPTVRLRRLMERTMLTETSQ EEECCEEEECCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA