| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is nfrA1 [H]
Identifier: 222526652
GI number: 222526652
Start: 4262612
End: 4263442
Strand: Reverse
Name: nfrA1 [H]
Synonym: Chy400_3421
Alternate gene names: 222526652
Gene position: 4263442-4262612 (Counterclockwise)
Preceding gene: 222526653
Following gene: 222526651
Centisome position: 80.92
GC content: 57.88
Gene sequence:
>831_bases ATGACCGATACCACAACCACAACGCAAGAACTCTTACACCAGCGTTACGGCAATGATATTCCGCCATCCATCATCAGCAC CCCGATCATCGACCTGTTACTGAGTCACCGTTCTGTACGTTCGTACAGTAACGAACCACTGCCGGAAGGCACGCTTGAAA CGATGATTGCAGCGGCCCAATCTGCGGCCACATCATCAAATCTCCAGACGTGGAGTGTGGTTGCGGTGACTGACCCCGAA CGAAAGCATCGCCTGGCGACCCTGGCCGGTGATCAAAACCAGATTCGGCGGGCACCGCTTTTCCTGGTCTGGCTGGCCGA TCTGCACCGCATTGCCCAGGCGGCTGATGCCCGGCAGATGCCACACGAGGGGCTTGACTACCTGGAAATGTGGCTGGTGG GTGTGATAGATGCGGCCCTGGCAGCACAGAATGCTGTCGTTGCCGCCGAGTCGCTCGGCCTCGGTACCGTCTACATTGGC GCCATTCGCAATCATCCACTGGAGGTAGCGGCTGAATTGCAACTGCCACCGATGGTGATGCCGGTGTTCGGGATGTGTGT GGGTCGTCCCAATCCGGCACGACCGGCAGCGATTAAACCACGTTTGCCCCAGGAGGCGGTACTTCACCGGGAAGTCTACC GGCCAGAGCAGATACCACCTGCTGTCGAACGTTACAACGCGACAATGAGCGCCTTTTACGCGGCCCAACAGATGAATGTA GAAGGCGATTGGGTCGATCACTCGGCACGTCGGGTTGCCGGGCCGCATACCCTTTCGGGTCGTGATGTCCTGCGTGAAGT GCTGCATCGACTCGGTTTTCGGTTGAAATAA
Upstream 100 bases:
>100_bases CCGTTGCAGTGTCTATCCTGTTACCGGATTGTCGCGCAGTTTCGTGTATAATCGGCATATCTTTGACTTAACAACCAATC ATGTAGAGGAACCATTATCT
Downstream 100 bases:
>100_bases GACAACTTTACGCATAAGTACGCGCTTCTCCCGCTGTATCGTCTTTGGTGCAGCGGGAGATATGTTATACTTTGAATAGG TTTAAACAGATTTAACAAGA
Product: nitroreductase
Products: NA
Alternate protein names: NADPH-dependent FMN reductase; NADPH-dependent nitroreductase; NADPH-dependent oxidoreductase [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTDTTTTTQELLHQRYGNDIPPSIISTPIIDLLLSHRSVRSYSNEPLPEGTLETMIAAAQSAATSSNLQTWSVVAVTDPE RKHRLATLAGDQNQIRRAPLFLVWLADLHRIAQAADARQMPHEGLDYLEMWLVGVIDAALAAQNAVVAAESLGLGTVYIG AIRNHPLEVAAELQLPPMVMPVFGMCVGRPNPARPAAIKPRLPQEAVLHREVYRPEQIPPAVERYNATMSAFYAAQQMNV EGDWVDHSARRVAGPHTLSGRDVLREVLHRLGFRLK
Sequences:
>Translated_276_residues MTDTTTTTQELLHQRYGNDIPPSIISTPIIDLLLSHRSVRSYSNEPLPEGTLETMIAAAQSAATSSNLQTWSVVAVTDPE RKHRLATLAGDQNQIRRAPLFLVWLADLHRIAQAADARQMPHEGLDYLEMWLVGVIDAALAAQNAVVAAESLGLGTVYIG AIRNHPLEVAAELQLPPMVMPVFGMCVGRPNPARPAAIKPRLPQEAVLHREVYRPEQIPPAVERYNATMSAFYAAQQMNV EGDWVDHSARRVAGPHTLSGRDVLREVLHRLGFRLK >Mature_275_residues TDTTTTTQELLHQRYGNDIPPSIISTPIIDLLLSHRSVRSYSNEPLPEGTLETMIAAAQSAATSSNLQTWSVVAVTDPER KHRLATLAGDQNQIRRAPLFLVWLADLHRIAQAADARQMPHEGLDYLEMWLVGVIDAALAAQNAVVAAESLGLGTVYIGA IRNHPLEVAAELQLPPMVMPVFGMCVGRPNPARPAAIKPRLPQEAVLHREVYRPEQIPPAVERYNATMSAFYAAQQMNVE GDWVDHSARRVAGPHTLSGRDVLREVLHRLGFRLK
Specific function: Reduces FMNH(2) to FMN, with NADPH as reductant. It also reduces nitroaromatic compounds, quinones and azo dyes [H]
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavin oxidoreductase frp family [H]
Homologues:
Organism=Escherichia coli, GI1787075, Length=248, Percent_Identity=37.0967741935484, Blast_Score=150, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016446 - InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: =1.5.1.29 [H]
Molecular weight: Translated: 30447; Mature: 30316
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTTTTTQELLHQRYGNDIPPSIISTPIIDLLLSHRSVRSYSNEPLPEGTLETMIAAAQ CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH SAATSSNLQTWSVVAVTDPERKHRLATLAGDQNQIRRAPLFLVWLADLHRIAQAADARQM HHHCCCCCCEEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PHEGLDYLEMWLVGVIDAALAAQNAVVAAESLGLGTVYIGAIRNHPLEVAAELQLPPMVM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCHHHHCCCCCCCHHH PVFGMCVGRPNPARPAAIKPRLPQEAVLHREVYRPEQIPPAVERYNATMSAFYAAQQMNV HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC EGDWVDHSARRVAGPHTLSGRDVLREVLHRLGFRLK CCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure TDTTTTTQELLHQRYGNDIPPSIISTPIIDLLLSHRSVRSYSNEPLPEGTLETMIAAAQ CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH SAATSSNLQTWSVVAVTDPERKHRLATLAGDQNQIRRAPLFLVWLADLHRIAQAADARQM HHHCCCCCCEEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PHEGLDYLEMWLVGVIDAALAAQNAVVAAESLGLGTVYIGAIRNHPLEVAAELQLPPMVM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCHHHHCCCCCCCHHH PVFGMCVGRPNPARPAAIKPRLPQEAVLHREVYRPEQIPPAVERYNATMSAFYAAQQMNV HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC EGDWVDHSARRVAGPHTLSGRDVLREVLHRLGFRLK CCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377; 9836433 [H]