| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526651
Identifier: 222526651
GI number: 222526651
Start: 4261880
End: 4262506
Strand: Reverse
Name: 222526651
Synonym: Chy400_3420
Alternate gene names: NA
Gene position: 4262506-4261880 (Counterclockwise)
Preceding gene: 222526652
Following gene: 222526650
Centisome position: 80.9
GC content: 59.01
Gene sequence:
>627_bases ATGAGCGACAAGGAAACAGCAACCTATCTTTCGCTGTCGGCAGCAAGTAAGCTTCTCGGCGTGCATGCCTCAACCCTCCG GCTCTGGGCAGATGAAGGTGCCGTGCCGGTGTATATCACGCCGGGTGGACACCGTCGTTTTGCCCGCGCCGACATTCTGG CCTTGGCTTCGCGCCGACCATTACCATCGCAATCGATCAGTAGTGTCCTGGCCAGCAAAGCATTGGCCCAGACCCGTAAT GAACTGGCGCATTCGTCGTCGGCACCAGCCTGGATGCACGCGATGAACGAGCAGGAGCGGCTGGCATGGCGACGGGTTGG CCAGCAGTTGATGGGTGTTGTGTTGCGTTACGTCAGCACCCACGACGAACAGAGTCCACTCCTTGATGAGGCACGGGCGA TTGGTCACAGCTATGCCCGTCTGGCCCGTGCGGCAGGACTGCCGTTAACAGATGCGATTGCCGCAGCGCTCTTTTTTCGC GATTCGCTGGTTGAGGCGGCGATGGATTTGCCTGAAGAAGCTCGTGTACGCCCCTCGGAGAGTGCGCGGCTGCTGCGACG CATCAGTCGCGTGGCTAATGAAGTCCAACTGGCTGTTGTGAGCGGATATGAAACAACAGAGGAGTAA
Upstream 100 bases:
>100_bases CTTTACGCATAAGTACGCGCTTCTCCCGCTGTATCGTCTTTGGTGCAGCGGGAGATATGTTATACTTTGAATAGGTTTAA ACAGATTTAACAAGACTCCT
Downstream 100 bases:
>100_bases AGTGTGGAACCGACGACTGAGCAACGATTGAATGTCCCACGGACTCTCAAGCTGGGTACTTTTCATATCGGTTCATCGTT CATCGATTTGTTGACATCAG
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSDKETATYLSLSAASKLLGVHASTLRLWADEGAVPVYITPGGHRRFARADILALASRRPLPSQSISSVLASKALAQTRN ELAHSSSAPAWMHAMNEQERLAWRRVGQQLMGVVLRYVSTHDEQSPLLDEARAIGHSYARLARAAGLPLTDAIAAALFFR DSLVEAAMDLPEEARVRPSESARLLRRISRVANEVQLAVVSGYETTEE
Sequences:
>Translated_208_residues MSDKETATYLSLSAASKLLGVHASTLRLWADEGAVPVYITPGGHRRFARADILALASRRPLPSQSISSVLASKALAQTRN ELAHSSSAPAWMHAMNEQERLAWRRVGQQLMGVVLRYVSTHDEQSPLLDEARAIGHSYARLARAAGLPLTDAIAAALFFR DSLVEAAMDLPEEARVRPSESARLLRRISRVANEVQLAVVSGYETTEE >Mature_207_residues SDKETATYLSLSAASKLLGVHASTLRLWADEGAVPVYITPGGHRRFARADILALASRRPLPSQSISSVLASKALAQTRNE LAHSSSAPAWMHAMNEQERLAWRRVGQQLMGVVLRYVSTHDEQSPLLDEARAIGHSYARLARAAGLPLTDAIAAALFFRD SLVEAAMDLPEEARVRPSESARLLRRISRVANEVQLAVVSGYETTEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22713; Mature: 22582
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKETATYLSLSAASKLLGVHASTLRLWADEGAVPVYITPGGHRRFARADILALASRRP CCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHCCC LPSQSISSVLASKALAQTRNELAHSSSAPAWMHAMNEQERLAWRRVGQQLMGVVLRYVST CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC HDEQSPLLDEARAIGHSYARLARAAGLPLTDAIAAALFFRDSLVEAAMDLPEEARVRPSE CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCH SARLLRRISRVANEVQLAVVSGYETTEE HHHHHHHHHHHHHHHHHHEEECCCCCCC >Mature Secondary Structure SDKETATYLSLSAASKLLGVHASTLRLWADEGAVPVYITPGGHRRFARADILALASRRP CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHCCC LPSQSISSVLASKALAQTRNELAHSSSAPAWMHAMNEQERLAWRRVGQQLMGVVLRYVST CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC HDEQSPLLDEARAIGHSYARLARAAGLPLTDAIAAALFFRDSLVEAAMDLPEEARVRPSE CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCH SARLLRRISRVANEVQLAVVSGYETTEE HHHHHHHHHHHHHHHHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA