| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526639
Identifier: 222526639
GI number: 222526639
Start: 4244877
End: 4246577
Strand: Direct
Name: 222526639
Synonym: Chy400_3407
Alternate gene names: NA
Gene position: 4244877-4246577 (Clockwise)
Preceding gene: 222526638
Following gene: 222526640
Centisome position: 80.56
GC content: 61.67
Gene sequence:
>1701_bases TTGCCCCTGGCGCTCTCGATTGCTGCCGTCGGCGCGTGGGAATACGCCTCACGCCGGGAGCCTGCTCGCCAGCGCATCTG GTGGTGGCTGGGGGCGGTTGCCTGGGGGCTGGCGACCGCTGCCAAGATGAATTACGCCATCATTGCCGCGCCGGCAATGA TCGTGTTGTTGATTCAGCGCGGCCAAGCGCGACGCATACCTGTGCTGGCCGGGATTGCACTTCTGAGTTTTGTCGCGGCC AACCCCACGCTCTGGCGGCAGCCGTTGGAACGCCTGATTGCTATGGCCGGTTTCTGGACAGCGTACATGCAAGGGAGTGA GGTGCAGGCTGCCGGCTATCCCTGGTATCAGCCGCTCATCTGGTTGGCAACGGCACCGGCTGTGGGCTGGCATCCAGAGG TTTTCTTCTTCCCCGGCCCCGATCCGTGGTTAACGCTGCTGGCCTGTCTTGCGCTGCCGATGGCCTGGCGTGATCCCCAG CGTCGTTACCTGGTTGTCTGGTTCCTGAGCGGCATCCTTATCCTGCTGCTCTGGCCGACGAAATGGCCACAGTATGTGTT GACGCTGGTTACGCCGACCGTCTTGCTGGCCGCACCCCTGCTGTCGCGTTTCGTGACCTGGCTGTATCAGCTCAATGATT ACTGGGGCTGGAGCACCATCATGGCGCTGCGCCCGCCCCGCATGGCATTAATTGCGCTCGCCTTGCTGGTCGGGTTCATC GGCACGGTGTATGCCAGTGCATTGATTATGGTGACCGTCGGCAGTATCGGGTGGCGTTCAATCCCTCCAACAACCGGTGG TCTTCCGCCAGGGCCGGTGTACGCGATCCAGCCCTTGCGCGATGGCCGGGTTGCGTTGGGTGGGGAAGCTGGTCTGACCA TCTGGCAGGCGCCCCTCGTGAGCGAAGATCCGCCACGCTGGCGCCATCTGGACCTGGGACAGGTCTATGCCCTGGCCGAA ACGACTGCCGGTCTATGGGTGGCAAGTGATCGGGGGCTGGCCCTGGTACAGGGTGATGACGACTGGACGTGGCAAACGCC AGCTTTACCGGAGCTGCCGAATCTGTTGGTTCGTACAGTTGCGGCGGCGCCGGATGGTACCCTCTGGGTCGGCACGAATG CCGGTGGTATGGTGCGCAGCATTGATGGTCGCTGGCAATGGTTGCCGCAGGCTGGCCGTGGGGGACTGGTACTGTCGCTT GCTATCGAGCCATCCGGCGCGGTATGGTTTGGTGGGATCGGTGTGCTGAGTCGCTATCTACCGGCTTACGACACCTGGCA ACATTTTGAACGGACAGCCGGTTTTGCCGGTGCCGGGGTGTCGGCAATTCTGATCGATCAACACGGCGTGGTATGGGCGG CCACGCTGGGCGAAGGGCTGGCGCGTTGGGATGGAACGCGCTGGGAATGGTTGACCACTGCTAATCGCCGGCTACCGGCG CAGACCATCACGACACTGCTCGAAACTGCTGCCGGTGAGATTTGGGTTGGGGCTGCCCGGCCATTGACGACGGGCGGCTT TCTGTTGCGTTACGATGGGAGCGAATGGCACTCCTATCTGCCACGCAATTCAGGCTTTACCGGTGCCGAGCCATTAGCAT TGGCGGTAGATCGCTCAAATCTGCTATGGATCGGTACGCGAACTGATGGTATCCTTACCTATCAACTGAGTGCTGATCAG CGGAGTAGTTTCCTTCCATAG
Upstream 100 bases:
>100_bases GTTGCGCTGCTGGCCTTCACTGCCGGCCCACTGGCAGCCGGTTTGCTGGCAATTCACACCCTTACAGTGAAGTACACGGC ACAGGCGTACCTCGAAAGCA
Downstream 100 bases:
>100_bases GCTTTGGCCGAGAAAGAAGATGTTCTATGCCACTATACCGTCATCTCGATCTTCAGAGTCGCTACGTCACTTCTCGTCCG GTCGATGTCTGGCTTCCCGC
Product: two component regulator propeller domain-containing protein
Products: NA
Alternate protein names: Histidine Kinase; Two Component Regulator Sensor Protein; Two Component Regulator Propeller Domain-Containing Protein
Number of amino acids: Translated: 566; Mature: 565
Protein sequence:
>566_residues MPLALSIAAVGAWEYASRREPARQRIWWWLGAVAWGLATAAKMNYAIIAAPAMIVLLIQRGQARRIPVLAGIALLSFVAA NPTLWRQPLERLIAMAGFWTAYMQGSEVQAAGYPWYQPLIWLATAPAVGWHPEVFFFPGPDPWLTLLACLALPMAWRDPQ RRYLVVWFLSGILILLLWPTKWPQYVLTLVTPTVLLAAPLLSRFVTWLYQLNDYWGWSTIMALRPPRMALIALALLVGFI GTVYASALIMVTVGSIGWRSIPPTTGGLPPGPVYAIQPLRDGRVALGGEAGLTIWQAPLVSEDPPRWRHLDLGQVYALAE TTAGLWVASDRGLALVQGDDDWTWQTPALPELPNLLVRTVAAAPDGTLWVGTNAGGMVRSIDGRWQWLPQAGRGGLVLSL AIEPSGAVWFGGIGVLSRYLPAYDTWQHFERTAGFAGAGVSAILIDQHGVVWAATLGEGLARWDGTRWEWLTTANRRLPA QTITTLLETAAGEIWVGAARPLTTGGFLLRYDGSEWHSYLPRNSGFTGAEPLALAVDRSNLLWIGTRTDGILTYQLSADQ RSSFLP
Sequences:
>Translated_566_residues MPLALSIAAVGAWEYASRREPARQRIWWWLGAVAWGLATAAKMNYAIIAAPAMIVLLIQRGQARRIPVLAGIALLSFVAA NPTLWRQPLERLIAMAGFWTAYMQGSEVQAAGYPWYQPLIWLATAPAVGWHPEVFFFPGPDPWLTLLACLALPMAWRDPQ RRYLVVWFLSGILILLLWPTKWPQYVLTLVTPTVLLAAPLLSRFVTWLYQLNDYWGWSTIMALRPPRMALIALALLVGFI GTVYASALIMVTVGSIGWRSIPPTTGGLPPGPVYAIQPLRDGRVALGGEAGLTIWQAPLVSEDPPRWRHLDLGQVYALAE TTAGLWVASDRGLALVQGDDDWTWQTPALPELPNLLVRTVAAAPDGTLWVGTNAGGMVRSIDGRWQWLPQAGRGGLVLSL AIEPSGAVWFGGIGVLSRYLPAYDTWQHFERTAGFAGAGVSAILIDQHGVVWAATLGEGLARWDGTRWEWLTTANRRLPA QTITTLLETAAGEIWVGAARPLTTGGFLLRYDGSEWHSYLPRNSGFTGAEPLALAVDRSNLLWIGTRTDGILTYQLSADQ RSSFLP >Mature_565_residues PLALSIAAVGAWEYASRREPARQRIWWWLGAVAWGLATAAKMNYAIIAAPAMIVLLIQRGQARRIPVLAGIALLSFVAAN PTLWRQPLERLIAMAGFWTAYMQGSEVQAAGYPWYQPLIWLATAPAVGWHPEVFFFPGPDPWLTLLACLALPMAWRDPQR RYLVVWFLSGILILLLWPTKWPQYVLTLVTPTVLLAAPLLSRFVTWLYQLNDYWGWSTIMALRPPRMALIALALLVGFIG TVYASALIMVTVGSIGWRSIPPTTGGLPPGPVYAIQPLRDGRVALGGEAGLTIWQAPLVSEDPPRWRHLDLGQVYALAET TAGLWVASDRGLALVQGDDDWTWQTPALPELPNLLVRTVAAAPDGTLWVGTNAGGMVRSIDGRWQWLPQAGRGGLVLSLA IEPSGAVWFGGIGVLSRYLPAYDTWQHFERTAGFAGAGVSAILIDQHGVVWAATLGEGLARWDGTRWEWLTTANRRLPAQ TITTLLETAAGEIWVGAARPLTTGGFLLRYDGSEWHSYLPRNSGFTGAEPLALAVDRSNLLWIGTRTDGILTYQLSADQR SSFLP
Specific function: Unknown
COG id: COG3292
COG function: function code T; Predicted periplasmic ligand-binding sensor domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62106; Mature: 61974
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLALSIAAVGAWEYASRREPARQRIWWWLGAVAWGLATAAKMNYAIIAAPAMIVLLIQR CCEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHC GQARRIPVLAGIALLSFVAANPTLWRQPLERLIAMAGFWTAYMQGSEVQAAGYPWYQPLI CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHE WLATAPAVGWHPEVFFFPGPDPWLTLLACLALPMAWRDPQRRYLVVWFLSGILILLLWPT EEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHEEEECCC KWPQYVLTLVTPTVLLAAPLLSRFVTWLYQLNDYWGWSTIMALRPPRMALIALALLVGFI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHH GTVYASALIMVTVGSIGWRSIPPTTGGLPPGPVYAIQPLRDGRVALGGEAGLTIWQAPLV HHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCEEEECCCC SEDPPRWRHLDLGQVYALAETTAGLWVASDRGLALVQGDDDWTWQTPALPELPNLLVRTV CCCCCCCEECCHHHEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH AAAPDGTLWVGTNAGGMVRSIDGRWQWLPQAGRGGLVLSLAIEPSGAVWFGGIGVLSRYL HCCCCCCEEEECCCCCEEEECCCCEEECCCCCCCCEEEEEEECCCCCEEECCHHHHHHHC PAYDTWQHFERTAGFAGAGVSAILIDQHGVVWAATLGEGLARWDGTRWEWLTTANRRLPA CCCHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEHHHHHHHHCCCCCEEEEECCCCCCCH QTITTLLETAAGEIWVGAARPLTTGGFLLRYDGSEWHSYLPRNSGFTGAEPLALAVDRSN HHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCEEEEEECCC LLWIGTRTDGILTYQLSADQRSSFLP EEEEEECCCCEEEEEECCCCCCCCCC >Mature Secondary Structure PLALSIAAVGAWEYASRREPARQRIWWWLGAVAWGLATAAKMNYAIIAAPAMIVLLIQR CEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHC GQARRIPVLAGIALLSFVAANPTLWRQPLERLIAMAGFWTAYMQGSEVQAAGYPWYQPLI CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHE WLATAPAVGWHPEVFFFPGPDPWLTLLACLALPMAWRDPQRRYLVVWFLSGILILLLWPT EEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHEEEECCC KWPQYVLTLVTPTVLLAAPLLSRFVTWLYQLNDYWGWSTIMALRPPRMALIALALLVGFI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHH GTVYASALIMVTVGSIGWRSIPPTTGGLPPGPVYAIQPLRDGRVALGGEAGLTIWQAPLV HHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCEEEECCCC SEDPPRWRHLDLGQVYALAETTAGLWVASDRGLALVQGDDDWTWQTPALPELPNLLVRTV CCCCCCCEECCHHHEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH AAAPDGTLWVGTNAGGMVRSIDGRWQWLPQAGRGGLVLSLAIEPSGAVWFGGIGVLSRYL HCCCCCCEEEECCCCCEEEECCCCEEECCCCCCCCEEEEEEECCCCCEEECCHHHHHHHC PAYDTWQHFERTAGFAGAGVSAILIDQHGVVWAATLGEGLARWDGTRWEWLTTANRRLPA CCCHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEHHHHHHHHCCCCCEEEEECCCCCCCH QTITTLLETAAGEIWVGAARPLTTGGFLLRYDGSEWHSYLPRNSGFTGAEPLALAVDRSN HHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCEEEEEECCC LLWIGTRTDGILTYQLSADQRSSFLP EEEEEECCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA