| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526593
Identifier: 222526593
GI number: 222526593
Start: 4189806
End: 4190828
Strand: Reverse
Name: 222526593
Synonym: Chy400_3361
Alternate gene names: NA
Gene position: 4190828-4189806 (Counterclockwise)
Preceding gene: 222526594
Following gene: 222526592
Centisome position: 79.54
GC content: 57.97
Gene sequence:
>1023_bases ATGACAGACAAATCGTTAGACACCATCTTAAACGATTGTATCGATGCCCTCGCCGCAGGTGCAACGATTGATGAAGTATT GGCGCGCTACCCTGAGCAGGCTACAACTCTGCGGCCAATGCTGATTGCTGCGGCATCGCTCTTTGATCTGGCATCTGACC CAACCCCGGAGGCGAAAATCGCCTCACGACGGGCTTTCCTCCAACGAGCTGCAACGCCGCAACCGCGCATCATGCACTGG CAACGGCTGGCAATGATTGCAGCCAGTCTCATCCTTGCCATGCTTCTCTTCGGAGGCAGCCTGAGCTGGGCGGCAAATGC GGCATTGCCCGGCGATCCGCTCTACGGAGCAAAACGCACGGTGGAGCGTGTCCAGCTTGCGCTGAGTGGCAATGATGAAC GCCTCAAAGCCTCGCTTGAAGAGCGTCGCCGCAGTGAGGTGACGACCCTGATCGAACGACGACGCAAGGAAGCTGTTGAG TTCCAGGGTGTCGTTGAGCAAGTAAGCTTAGCGCAGTGGCAGGTCAGTGGTATCAACGTCATTATTGATCCTAACACGCA AATTCGTGGTCAGGTAGCACCAGGAGCCGAGATACTGGTGCGTGGACGTACAACAGATGATGGTGTTCAGGCGATAGAGA TTATCGTGGAAGTAGACGATGACAGACGGGACGATTTATTCGTCACGCCTACGCGACAACCTGTCTCGACTCCTTCACCG ACAGTAGTGACAGTAACCCCGTCACCAACCACGTCGCCAACTGCATCACCGACTGCATCACCAACTGCATCACCAACTGC ATCACCGACTGCATCACCGACTGCATCAGCGACTGCATCACCGACTGAACCACCGCCACCGCCACCACCGCCACCACCGC CACCGACGGTCGCACCACCACCGCCACCGACGGTCGCACCACCGCCACCGCCGCCACCGCCACCACCGCCACCACCGCCG CCACCACCCGGTGATGACGATGACGACGATGGCGACGATGACGATGACAACGATGATGATTAA
Upstream 100 bases:
>100_bases AAGTCGCCCGTATTCTTGGCAAAACTGAGGGTGCTGTTAAACAACTACAGGCACGTGCGATTGCGGCACTGGCACGCCAA ATGACACCGGGGGTGGTCGA
Downstream 100 bases:
>100_bases AACCGTCTGATCACAAATCAGACATCAACATCAGGAACCGTACAATGAGTGTATCGTCCGGTTCCTGATCTTTTTTTCAT AAAAATTCCTTTGCAGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTDKSLDTILNDCIDALAAGATIDEVLARYPEQATTLRPMLIAAASLFDLASDPTPEAKIASRRAFLQRAATPQPRIMHW QRLAMIAASLILAMLLFGGSLSWAANAALPGDPLYGAKRTVERVQLALSGNDERLKASLEERRRSEVTTLIERRRKEAVE FQGVVEQVSLAQWQVSGINVIIDPNTQIRGQVAPGAEILVRGRTTDDGVQAIEIIVEVDDDRRDDLFVTPTRQPVSTPSP TVVTVTPSPTTSPTASPTASPTASPTASPTASPTASATASPTEPPPPPPPPPPPPTVAPPPPPTVAPPPPPPPPPPPPPP PPPGDDDDDDGDDDDDNDDD
Sequences:
>Translated_340_residues MTDKSLDTILNDCIDALAAGATIDEVLARYPEQATTLRPMLIAAASLFDLASDPTPEAKIASRRAFLQRAATPQPRIMHW QRLAMIAASLILAMLLFGGSLSWAANAALPGDPLYGAKRTVERVQLALSGNDERLKASLEERRRSEVTTLIERRRKEAVE FQGVVEQVSLAQWQVSGINVIIDPNTQIRGQVAPGAEILVRGRTTDDGVQAIEIIVEVDDDRRDDLFVTPTRQPVSTPSP TVVTVTPSPTTSPTASPTASPTASPTASPTASPTASATASPTEPPPPPPPPPPPPTVAPPPPPTVAPPPPPPPPPPPPPP PPPGDDDDDDGDDDDDNDDD >Mature_339_residues TDKSLDTILNDCIDALAAGATIDEVLARYPEQATTLRPMLIAAASLFDLASDPTPEAKIASRRAFLQRAATPQPRIMHWQ RLAMIAASLILAMLLFGGSLSWAANAALPGDPLYGAKRTVERVQLALSGNDERLKASLEERRRSEVTTLIERRRKEAVEF QGVVEQVSLAQWQVSGINVIIDPNTQIRGQVAPGAEILVRGRTTDDGVQAIEIIVEVDDDRRDDLFVTPTRQPVSTPSPT VVTVTPSPTTSPTASPTASPTASPTASPTASPTASATASPTEPPPPPPPPPPPPTVAPPPPPTVAPPPPPPPPPPPPPPP PPGDDDDDDGDDDDDNDDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24639643, Length=84, Percent_Identity=54.7619047619048, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35915; Mature: 35784
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKSLDTILNDCIDALAAGATIDEVLARYPEQATTLRPMLIAAASLFDLASDPTPEAKI CCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH ASRRAFLQRAATPQPRIMHWQRLAMIAASLILAMLLFGGSLSWAANAALPGDPLYGAKRT HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHH VERVQLALSGNDERLKASLEERRRSEVTTLIERRRKEAVEFQGVVEQVSLAQWQVSGINV HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEE IIDPNTQIRGQVAPGAEILVRGRTTDDGVQAIEIIVEVDDDRRDDLFVTPTRQPVSTPSP EECCCCCEEEEECCCCEEEEECCCCCHHHEEEEEEEECCCCCCCCEEECCCCCCCCCCCC TVVTVTPSPTTSPTASPTASPTASPTASPTASPTASATASPTEPPPPPPPPPPPPTVAPP EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPTVAPPPPPPPPPPPPPPPPPGDDDDDDGDDDDDNDDD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDKSLDTILNDCIDALAAGATIDEVLARYPEQATTLRPMLIAAASLFDLASDPTPEAKI CCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH ASRRAFLQRAATPQPRIMHWQRLAMIAASLILAMLLFGGSLSWAANAALPGDPLYGAKRT HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHH VERVQLALSGNDERLKASLEERRRSEVTTLIERRRKEAVEFQGVVEQVSLAQWQVSGINV HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEE IIDPNTQIRGQVAPGAEILVRGRTTDDGVQAIEIIVEVDDDRRDDLFVTPTRQPVSTPSP EECCCCCEEEEECCCCEEEEECCCCCHHHEEEEEEEECCCCCCCCEEECCCCCCCCCCCC TVVTVTPSPTTSPTASPTASPTASPTASPTASPTASATASPTEPPPPPPPPPPPPTVAPP EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPTVAPPPPPPPPPPPPPPPPPGDDDDDDGDDDDDNDDD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA