Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is yyzM [H]

Identifier: 222526543

GI number: 222526543

Start: 4125499

End: 4125711

Strand: Direct

Name: yyzM [H]

Synonym: Chy400_3310

Alternate gene names: 222526543

Gene position: 4125499-4125711 (Clockwise)

Preceding gene: 222526542

Following gene: 222526544

Centisome position: 78.3

GC content: 60.56

Gene sequence:

>213_bases
ATGAAACCCATGCCGCTTGCGCTTAACGATGTCGTGCAGTTACGGAAGCCACACGCCTGTGGTGGTGATACCTGGCGGAT
CGTGCGGCTGGGTGCCGACATCGGTCTGCGCTGTGAAACGTGTGGTCGGCGCGTGTTGTTGCCACGCTCAGAGGTCGAAC
GTCGGATCAAGCGGTTTGTGGTGCGGAGCGAAGATGCGCAGGGTGCTGAGTAG

Upstream 100 bases:

>100_bases
CAGATGGCTGCGCAAAGCGGGCGTGCATTGCAGGATTGTTCACTGGCTGAAATGATGGCCTGGTGGGCAGAAGCCAAAAC
CCTGGGCAACGGATGGTGAG

Downstream 100 bases:

>100_bases
GTGACGGATTGTCGCCGTGTGTGGGCATATTTCGCCTGTACTTCGCGTGGTATCATTTCAAATCTGCCGTCATATAAGGT
CATAGCGTGCTCGATAGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MKPMPLALNDVVQLRKPHACGGDTWRIVRLGADIGLRCETCGRRVLLPRSEVERRIKRFVVRSEDAQGAE

Sequences:

>Translated_70_residues
MKPMPLALNDVVQLRKPHACGGDTWRIVRLGADIGLRCETCGRRVLLPRSEVERRIKRFVVRSEDAQGAE
>Mature_70_residues
MKPMPLALNDVVQLRKPHACGGDTWRIVRLGADIGLRCETCGRRVLLPRSEVERRIKRFVVRSEDAQGAE

Specific function: Unknown

COG id: COG4481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009296 [H]

Pfam domain/function: PF06107 DUF951 [H]

EC number: NA

Molecular weight: Translated: 7927; Mature: 7927

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPMPLALNDVVQLRKPHACGGDTWRIVRLGADIGLRCETCGRRVLLPRSEVERRIKRFV
CCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCEECCCCCEEECCHHHHHHHHHHHH
VRSEDAQGAE
HCCCCCCCCC
>Mature Secondary Structure
MKPMPLALNDVVQLRKPHACGGDTWRIVRLGADIGLRCETCGRRVLLPRSEVERRIKRFV
CCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCEECCCCCEEECCHHHHHHHHHHHH
VRSEDAQGAE
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]